{"id":"https://openalex.org/W2899006596","doi":"https://doi.org/10.1109/embc.2018.8513140","title":"Computational Platform Based on Deep Learning for Segmenting Ventricular Endocardium in Long-axis Cardiac MR Imaging","display_name":"Computational Platform Based on Deep Learning for Segmenting Ventricular Endocardium in Long-axis Cardiac MR Imaging","publication_year":2018,"publication_date":"2018-07-01","ids":{"openalex":"https://openalex.org/W2899006596","doi":"https://doi.org/10.1109/embc.2018.8513140","mag":"2899006596","pmid":"https://pubmed.ncbi.nlm.nih.gov/30441351"},"language":"en","primary_location":{"id":"doi:10.1109/embc.2018.8513140","is_oa":false,"landing_page_url":"https://doi.org/10.1109/embc.2018.8513140","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2018 40th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5072073698","display_name":"Shuang Leng","orcid":"https://orcid.org/0000-0002-7635-5639"},"institutions":[{"id":"https://openalex.org/I4210147238","display_name":"National Heart Centre Singapore","ror":"https://ror.org/04f8k9513","country_code":"SG","type":"healthcare","lineage":["https://openalex.org/I4210147238"]}],"countries":["SG"],"is_corresponding":true,"raw_author_name":"Shuang Leng","raw_affiliation_strings":["National Heart Centre Singapore, Singapore, SG"],"affiliations":[{"raw_affiliation_string":"National Heart Centre Singapore, Singapore, SG","institution_ids":["https://openalex.org/I4210147238"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5029757365","display_name":"Xulei Yang","orcid":"https://orcid.org/0000-0002-7002-4564"},"institutions":[{"id":"https://openalex.org/I3005327000","display_name":"Institute for Infocomm Research","ror":"https://ror.org/053rfa017","country_code":"SG","type":"facility","lineage":["https://openalex.org/I115228651","https://openalex.org/I3005327000","https://openalex.org/I91275662"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Xulei Yang","raw_affiliation_strings":["Institute for Infocomm Research, Singapore, SG"],"affiliations":[{"raw_affiliation_string":"Institute for Infocomm Research, Singapore, SG","institution_ids":["https://openalex.org/I3005327000"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5003990800","display_name":"Xiaodan Zhao","orcid":"https://orcid.org/0000-0003-1469-8027"},"institutions":[{"id":"https://openalex.org/I4210147238","display_name":"National Heart Centre Singapore","ror":"https://ror.org/04f8k9513","country_code":"SG","type":"healthcare","lineage":["https://openalex.org/I4210147238"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Xiaodan Zhao","raw_affiliation_strings":["National Heart Centre Singapore, Singapore, SG"],"affiliations":[{"raw_affiliation_string":"National Heart Centre Singapore, Singapore, SG","institution_ids":["https://openalex.org/I4210147238"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5010092389","display_name":"Zeng Zeng","orcid":"https://orcid.org/0000-0002-2405-0323"},"institutions":[{"id":"https://openalex.org/I3005327000","display_name":"Institute for Infocomm Research","ror":"https://ror.org/053rfa017","country_code":"SG","type":"facility","lineage":["https://openalex.org/I115228651","https://openalex.org/I3005327000","https://openalex.org/I91275662"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Zeng Zeng","raw_affiliation_strings":["Institute for Infocomm Research, Singapore, SG"],"affiliations":[{"raw_affiliation_string":"Institute for Infocomm Research, Singapore, SG","institution_ids":["https://openalex.org/I3005327000"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101429883","display_name":"Yi Su","orcid":"https://orcid.org/0000-0001-5416-7138"},"institutions":[{"id":"https://openalex.org/I3004594783","display_name":"Institute of High Performance Computing","ror":"https://ror.org/02n0ejh50","country_code":"SG","type":"facility","lineage":["https://openalex.org/I115228651","https://openalex.org/I3004594783","https://openalex.org/I91275662"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Yi Su","raw_affiliation_strings":["Institute of High Performance Computing, Singapore, SG"],"affiliations":[{"raw_affiliation_string":"Institute of High Performance Computing, Singapore, SG","institution_ids":["https://openalex.org/I3004594783"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5062930431","display_name":"Angela S. Koh","orcid":"https://orcid.org/0000-0001-5629-9732"},"institutions":[{"id":"https://openalex.org/I4210147238","display_name":"National Heart Centre Singapore","ror":"https://ror.org/04f8k9513","country_code":"SG","type":"healthcare","lineage":["https://openalex.org/I4210147238"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Angela S. Koh","raw_affiliation_strings":["National Heart Centre Singapore, Singapore, SG"],"affiliations":[{"raw_affiliation_string":"National Heart Centre Singapore, Singapore, SG","institution_ids":["https://openalex.org/I4210147238"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5107211313","display_name":"David Sim","orcid":"https://orcid.org/0000-0002-5136-9460"},"institutions":[{"id":"https://openalex.org/I4210147238","display_name":"National Heart Centre Singapore","ror":"https://ror.org/04f8k9513","country_code":"SG","type":"healthcare","lineage":["https://openalex.org/I4210147238"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"David Sim","raw_affiliation_strings":["National Heart Centre Singapore, Singapore, SG"],"affiliations":[{"raw_affiliation_string":"National Heart Centre Singapore, Singapore, SG","institution_ids":["https://openalex.org/I4210147238"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5053846283","display_name":"Ju Le Tan","orcid":"https://orcid.org/0000-0001-9822-3277"},"institutions":[{"id":"https://openalex.org/I4210147238","display_name":"National Heart Centre Singapore","ror":"https://ror.org/04f8k9513","country_code":"SG","type":"healthcare","lineage":["https://openalex.org/I4210147238"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Ju Le Tan","raw_affiliation_strings":["National Heart Centre Singapore, Singapore, SG"],"affiliations":[{"raw_affiliation_string":"National Heart Centre Singapore, Singapore, SG","institution_ids":["https://openalex.org/I4210147238"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5027649343","display_name":"Ru\u2010San Tan","orcid":"https://orcid.org/0000-0003-2086-6517"},"institutions":[{"id":"https://openalex.org/I4210147238","display_name":"National Heart Centre Singapore","ror":"https://ror.org/04f8k9513","country_code":"SG","type":"healthcare","lineage":["https://openalex.org/I4210147238"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Ru San Tan","raw_affiliation_strings":["National Heart Centre Singapore, Singapore, SG"],"affiliations":[{"raw_affiliation_string":"National Heart Centre Singapore, Singapore, SG","institution_ids":["https://openalex.org/I4210147238"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5071334202","display_name":"Liang Zhong","orcid":"https://orcid.org/0000-0003-3608-4173"},"institutions":[{"id":"https://openalex.org/I4210147238","display_name":"National Heart Centre Singapore","ror":"https://ror.org/04f8k9513","country_code":"SG","type":"healthcare","lineage":["https://openalex.org/I4210147238"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Liang Zhong","raw_affiliation_strings":["National Heart Centre Singapore, Singapore, SG"],"affiliations":[{"raw_affiliation_string":"National Heart Centre Singapore, Singapore, SG","institution_ids":["https://openalex.org/I4210147238"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":10,"corresponding_author_ids":["https://openalex.org/A5072073698"],"corresponding_institution_ids":["https://openalex.org/I4210147238"],"apc_list":null,"apc_paid":null,"fwci":0.8841,"has_fulltext":false,"cited_by_count":13,"citation_normalized_percentile":{"value":0.76113676,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":"521","issue":null,"first_page":"4500","last_page":"4503"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10372","display_name":"Cardiac Imaging and Diagnostics","score":0.9918000102043152,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10372","display_name":"Cardiac Imaging and Diagnostics","score":0.9918000102043152,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10378","display_name":"Advanced MRI Techniques and Applications","score":0.9915000200271606,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10522","display_name":"Medical Imaging Techniques and Applications","score":0.9869999885559082,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/endocardium","display_name":"Endocardium","score":0.8939149379730225},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.47599923610687256},{"id":"https://openalex.org/keywords/deep-learning","display_name":"Deep learning","score":0.45434969663619995},{"id":"https://openalex.org/keywords/image-segmentation","display_name":"Image segmentation","score":0.42901769280433655},{"id":"https://openalex.org/keywords/segmentation","display_name":"Segmentation","score":0.42662927508354187},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4234827160835266},{"id":"https://openalex.org/keywords/computer-vision","display_name":"Computer vision","score":0.35300421714782715},{"id":"https://openalex.org/keywords/cardiology","display_name":"Cardiology","score":0.2792653441429138},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.2255823314189911}],"concepts":[{"id":"https://openalex.org/C85378888","wikidata":"https://www.wikidata.org/wiki/Q721856","display_name":"Endocardium","level":2,"score":0.8939149379730225},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.47599923610687256},{"id":"https://openalex.org/C108583219","wikidata":"https://www.wikidata.org/wiki/Q197536","display_name":"Deep learning","level":2,"score":0.45434969663619995},{"id":"https://openalex.org/C124504099","wikidata":"https://www.wikidata.org/wiki/Q56933","display_name":"Image segmentation","level":3,"score":0.42901769280433655},{"id":"https://openalex.org/C89600930","wikidata":"https://www.wikidata.org/wiki/Q1423946","display_name":"Segmentation","level":2,"score":0.42662927508354187},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4234827160835266},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.35300421714782715},{"id":"https://openalex.org/C164705383","wikidata":"https://www.wikidata.org/wiki/Q10379","display_name":"Cardiology","level":1,"score":0.2792653441429138},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.2255823314189911}],"mesh":[{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004699","descriptor_name":"Endocardium","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":false},{"descriptor_ui":"D004699","descriptor_name":"Endocardium","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":false},{"descriptor_ui":"D004699","descriptor_name":"Endocardium","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":false},{"descriptor_ui":"D006352","descriptor_name":"Heart Ventricles","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":false},{"descriptor_ui":"D006352","descriptor_name":"Heart Ventricles","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":false},{"descriptor_ui":"D006352","descriptor_name":"Heart Ventricles","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007090","descriptor_name":"Image Interpretation, Computer-Assisted","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D007090","descriptor_name":"Image Interpretation, Computer-Assisted","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D007090","descriptor_name":"Image Interpretation, Computer-Assisted","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008955","descriptor_name":"Models, Cardiovascular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008955","descriptor_name":"Models, Cardiovascular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008955","descriptor_name":"Models, Cardiovascular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019028","descriptor_name":"Magnetic Resonance Imaging, Cine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019028","descriptor_name":"Magnetic Resonance Imaging, Cine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019028","descriptor_name":"Magnetic Resonance Imaging, Cine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":2,"locations":[{"id":"doi:10.1109/embc.2018.8513140","is_oa":false,"landing_page_url":"https://doi.org/10.1109/embc.2018.8513140","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2018 40th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC)","raw_type":"proceedings-article"},{"id":"pmid:30441351","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/30441351","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":19,"referenced_works":["https://openalex.org/W1605601497","https://openalex.org/W1901129140","https://openalex.org/W1903029394","https://openalex.org/W1987512289","https://openalex.org/W2031745977","https://openalex.org/W2060292275","https://openalex.org/W2081065608","https://openalex.org/W2099290282","https://openalex.org/W2112796928","https://openalex.org/W2112919934","https://openalex.org/W2114856503","https://openalex.org/W2146282135","https://openalex.org/W2152826865","https://openalex.org/W2167194715","https://openalex.org/W2293913968","https://openalex.org/W2337438617","https://openalex.org/W2588773529","https://openalex.org/W2919115771","https://openalex.org/W6636257949"],"related_works":["https://openalex.org/W4006364","https://openalex.org/W2937909273","https://openalex.org/W2030181133","https://openalex.org/W2920640915","https://openalex.org/W2052497555","https://openalex.org/W2993816341","https://openalex.org/W2580238121","https://openalex.org/W157247713","https://openalex.org/W2619274976","https://openalex.org/W1522196789"],"abstract_inverted_index":{"This":[0],"paper":[1],"presents":[2],"an":[3,84,184],"automated":[4,168],"computational":[5],"platform":[6],"based":[7],"on":[8],"deep":[9,35,187],"learning":[10],"(DL)":[11],"approach":[12],"for":[13,94,113,154,172],"left":[14],"ventricular":[15,19],"(LV)":[16],"and":[17,59,106,125,169,175],"right":[18],"(RV)":[20],"endocardium":[21,177],"segmentation":[22,136,171],"in":[23,63,178],"long-axis":[24,179],"cine":[25,180],"cardiovascular":[26],"magnetic":[27],"resonance":[28],"(CMR).":[29],"The":[30,133],"proposed":[31,134,159],"method":[32],"uses":[33],"modified":[34],"U-Net":[36],"convolutional":[37,188],"networks.":[38],"We":[39],"trained":[40,186],"our":[41,158],"model":[42],"using":[43,183],"4800":[44],"images":[45,65,153,182],"from":[46,66],"40":[47,72],"human":[48],"subjects":[49,68],"(20":[50],"healthy":[51,70],"volunteers,":[52,71],"20":[53],"patients":[54],"with":[55,83,108],"various":[56],"cardiac":[57],"diseases)":[58],"validated":[60],"the":[61,96,109],"technique":[62],"6000":[64],"50":[67],"(10":[69],"patients).":[73],"An":[74],"average":[75,85],"Dice":[76],"metric":[77],"of":[78,88,104],"0.929":[79],"\u00b1":[80,90],"0.036":[81],"along":[82],"Jaccard":[86],"index":[87],"0.869":[89],"0.059":[91],"were":[92,131],"achieved":[93],"all":[95],"studied":[97],"subjects.":[98],"In":[99],"addition,":[100],"a":[101,162],"high":[102],"level":[103],"correlation":[105],"agreement":[107],"ground":[110],"truth":[111],"contours":[112],"LV":[114,118,174],"ejection":[115],"fraction":[116],"(R=0.975),":[117],"fractional":[119,127],"area":[120,128],"change":[121,129],"(R=0.959":[122],"to":[123,165],"0.971),":[124],"RV":[126,176],"(R=0.927)":[130],"observed.":[132],"DL-based":[135],"process":[137],"took":[138],"less":[139],"than":[140],"3":[141],"seconds":[142],"per":[143,149],"subject":[144],"(or":[145],"<":[146],"30":[147],"milliseconds":[148],"image":[150],"over":[151],"120":[152],"each":[155],"subject).":[156],"Therefore,":[157],"framework":[160],"offers":[161],"promising":[163],"means":[164],"achieve":[166],"fully":[167],"rapid":[170],"both":[173],"CMR":[181],"appropriately":[185],"neural":[189],"network.":[190]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":3},{"year":2022,"cited_by_count":4},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":2},{"year":2019,"cited_by_count":2}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
