{"id":"https://openalex.org/W2756123444","doi":"https://doi.org/10.1109/embc.2017.8036825","title":"Rodent brain extraction using B-spline based deformable model","display_name":"Rodent brain extraction using B-spline based deformable model","publication_year":2017,"publication_date":"2017-07-01","ids":{"openalex":"https://openalex.org/W2756123444","doi":"https://doi.org/10.1109/embc.2017.8036825","mag":"2756123444","pmid":"https://pubmed.ncbi.nlm.nih.gov/29059873"},"language":"en","primary_location":{"id":"doi:10.1109/embc.2017.8036825","is_oa":false,"landing_page_url":"https://doi.org/10.1109/embc.2017.8036825","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2017 39th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5090385470","display_name":"Weimin Huang","orcid":"https://orcid.org/0000-0001-9622-5041"},"institutions":[{"id":"https://openalex.org/I3005327000","display_name":"Institute for Infocomm Research","ror":"https://ror.org/053rfa017","country_code":"SG","type":"facility","lineage":["https://openalex.org/I115228651","https://openalex.org/I3005327000","https://openalex.org/I91275662"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Weimin Huang","raw_affiliation_strings":["Institute for Infocomm Research, Singapore"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute for Infocomm Research, Singapore","institution_ids":["https://openalex.org/I3005327000"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Chen Ling","orcid":null},"institutions":[{"id":"https://openalex.org/I172675005","display_name":"Nanyang Technological University","ror":"https://ror.org/02e7b5302","country_code":"SG","type":"education","lineage":["https://openalex.org/I172675005"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Chen Ling","raw_affiliation_strings":["School of EEE, Nanyang Technological Univ., Singapore"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of EEE, Nanyang Technological Univ., Singapore","institution_ids":["https://openalex.org/I172675005"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5112128304","display_name":"Su Huang","orcid":null},"institutions":[{"id":"https://openalex.org/I3005327000","display_name":"Institute for Infocomm Research","ror":"https://ror.org/053rfa017","country_code":"SG","type":"facility","lineage":["https://openalex.org/I115228651","https://openalex.org/I3005327000","https://openalex.org/I91275662"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Su Huang","raw_affiliation_strings":["Institute for Infocomm Research, Singapore"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute for Infocomm Research, Singapore","institution_ids":["https://openalex.org/I3005327000"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5064390827","display_name":"Zhongkang Lu","orcid":"https://orcid.org/0000-0001-7379-3193"},"institutions":[{"id":"https://openalex.org/I3005327000","display_name":"Institute for Infocomm Research","ror":"https://ror.org/053rfa017","country_code":"SG","type":"facility","lineage":["https://openalex.org/I115228651","https://openalex.org/I3005327000","https://openalex.org/I91275662"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Zhongkang Lu","raw_affiliation_strings":["Institute for Infocomm Research, Singapore"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute for Infocomm Research, Singapore","institution_ids":["https://openalex.org/I3005327000"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5049506273","display_name":"Zhiping Lin","orcid":"https://orcid.org/0000-0002-1587-1226"},"institutions":[{"id":"https://openalex.org/I172675005","display_name":"Nanyang Technological University","ror":"https://ror.org/02e7b5302","country_code":"SG","type":"education","lineage":["https://openalex.org/I172675005"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Zhiping Lin","raw_affiliation_strings":["School of EEE, Nanyang Technological Univ., Singapore"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of EEE, Nanyang Technological Univ., Singapore","institution_ids":["https://openalex.org/I172675005"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.12966899,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"16","issue":null,"first_page":"313","last_page":"316"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10052","display_name":"Medical Image Segmentation Techniques","score":0.9959999918937683,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10052","display_name":"Medical Image Segmentation Techniques","score":0.9959999918937683,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9941999912261963,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10522","display_name":"Medical Imaging Techniques and Applications","score":0.9919999837875366,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.7329143285751343},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6644307971000671},{"id":"https://openalex.org/keywords/voxel","display_name":"Voxel","score":0.6622482538223267},{"id":"https://openalex.org/keywords/spline","display_name":"Spline (mechanical)","score":0.6242002248764038},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.5152621269226074},{"id":"https://openalex.org/keywords/computer-vision","display_name":"Computer vision","score":0.5056746006011963},{"id":"https://openalex.org/keywords/image-registration","display_name":"Image registration","score":0.4767214357852936},{"id":"https://openalex.org/keywords/extraction","display_name":"Extraction (chemistry)","score":0.4739668071269989},{"id":"https://openalex.org/keywords/rodent","display_name":"Rodent","score":0.4400359094142914},{"id":"https://openalex.org/keywords/b-spline","display_name":"B-spline","score":0.42443761229515076},{"id":"https://openalex.org/keywords/image","display_name":"Image (mathematics)","score":0.35920390486717224},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.23209506273269653},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.08228158950805664},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.07982876896858215}],"concepts":[{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.7329143285751343},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6644307971000671},{"id":"https://openalex.org/C54170458","wikidata":"https://www.wikidata.org/wiki/Q663554","display_name":"Voxel","level":2,"score":0.6622482538223267},{"id":"https://openalex.org/C10390562","wikidata":"https://www.wikidata.org/wiki/Q581809","display_name":"Spline (mechanical)","level":2,"score":0.6242002248764038},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.5152621269226074},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.5056746006011963},{"id":"https://openalex.org/C166704113","wikidata":"https://www.wikidata.org/wiki/Q861092","display_name":"Image registration","level":3,"score":0.4767214357852936},{"id":"https://openalex.org/C4725764","wikidata":"https://www.wikidata.org/wiki/Q844704","display_name":"Extraction (chemistry)","level":2,"score":0.4739668071269989},{"id":"https://openalex.org/C2778914748","wikidata":"https://www.wikidata.org/wiki/Q10850","display_name":"Rodent","level":2,"score":0.4400359094142914},{"id":"https://openalex.org/C15945459","wikidata":"https://www.wikidata.org/wiki/Q2083109","display_name":"B-spline","level":2,"score":0.42443761229515076},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.35920390486717224},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.23209506273269653},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.08228158950805664},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.07982876896858215},{"id":"https://openalex.org/C66938386","wikidata":"https://www.wikidata.org/wiki/Q633538","display_name":"Structural engineering","level":1,"score":0.0},{"id":"https://openalex.org/C43617362","wikidata":"https://www.wikidata.org/wiki/Q170050","display_name":"Chromatography","level":1,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.0},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008279","descriptor_name":"Magnetic Resonance Imaging","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008279","descriptor_name":"Magnetic Resonance Imaging","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008279","descriptor_name":"Magnetic Resonance Imaging","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012377","descriptor_name":"Rodentia","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012377","descriptor_name":"Rodentia","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012377","descriptor_name":"Rodentia","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1109/embc.2017.8036825","is_oa":false,"landing_page_url":"https://doi.org/10.1109/embc.2017.8036825","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2017 39th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC)","raw_type":"proceedings-article"},{"id":"pmid:29059873","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/29059873","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":19,"referenced_works":["https://openalex.org/W419665","https://openalex.org/W1994119018","https://openalex.org/W2004691878","https://openalex.org/W2021787435","https://openalex.org/W2038072430","https://openalex.org/W2066180616","https://openalex.org/W2068318021","https://openalex.org/W2071881327","https://openalex.org/W2080828831","https://openalex.org/W2100296123","https://openalex.org/W2111876935","https://openalex.org/W2113576511","https://openalex.org/W2115664739","https://openalex.org/W2117340355","https://openalex.org/W2157270343","https://openalex.org/W2166894022","https://openalex.org/W2167354555","https://openalex.org/W2171447090","https://openalex.org/W2537786719"],"related_works":["https://openalex.org/W3027020613","https://openalex.org/W2038239089","https://openalex.org/W2131662362","https://openalex.org/W2052425187","https://openalex.org/W2766141905","https://openalex.org/W3084529718","https://openalex.org/W3153287478","https://openalex.org/W2116141739","https://openalex.org/W1566260961","https://openalex.org/W2487825112"],"abstract_inverted_index":{"Accurate":[0],"rodent":[1,30,84,123],"brain":[2,31,40,59,70,85,124],"extraction":[3,41,71,86],"is":[4],"one":[5,92],"of":[6],"the":[7,29,39,47,52,69,75,81,97,111],"basic":[8],"steps":[9],"for":[10,38,83,103,122],"many":[11],"translational":[12],"study":[13],"using":[14,33,65,79],"Magnetic":[15],"Resonance":[16],"Imaging":[17],"(MRI).":[18],"In":[19],"this":[20],"paper,":[21],"we":[22,67],"present":[23],"a":[24,57,63,118],"new":[25],"approach":[26],"to":[27],"model":[28,46,78],"variation":[32],"non-rigid":[34],"B-spline":[35,53],"image":[36],"registration":[37],"in":[42],"MRI":[43],"images.":[44],"We":[45],"shape":[48],"and":[49,117],"appearance":[50],"with":[51,56,74],"parameters":[54],"together":[55],"mean":[58],"image.":[60],"Followed":[61],"by":[62],"method":[64,114],"multi-expert,":[66],"refine":[68],"region.":[72],"Compared":[73],"image-based":[76],"template":[77,106],"cross-correlation,":[80],"performance":[82,102],"has":[87],"shown":[88],"much":[89],"improvement":[90],"on":[91],"data":[93],"set":[94],"while":[95],"maintaining":[96],"similar":[98],"yet":[99],"more":[100],"consistent":[101],"another.":[104],"Both":[105],"based":[107,113],"methods":[108],"however":[109],"outperform":[110],"voxel":[112],"(3D":[115],"PCNN)":[116],"modified":[119],"BET":[120],"version":[121],"extraction.":[125]},"counts_by_year":[],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}