{"id":"https://openalex.org/W2533484312","doi":"https://doi.org/10.1109/embc.2016.7590914","title":"Quantitative analysis of histological tissue image based on cytological profiles and spatial statistics","display_name":"Quantitative analysis of histological tissue image based on cytological profiles and spatial statistics","publication_year":2016,"publication_date":"2016-08-01","ids":{"openalex":"https://openalex.org/W2533484312","doi":"https://doi.org/10.1109/embc.2016.7590914","mag":"2533484312","pmid":"https://pubmed.ncbi.nlm.nih.gov/28324942"},"language":"en","primary_location":{"id":"doi:10.1109/embc.2016.7590914","is_oa":false,"landing_page_url":"https://doi.org/10.1109/embc.2016.7590914","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2016 38th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://escholarship.org/uc/item/41n6d96r","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5003286550","display_name":"Young Hwan Chang","orcid":"https://orcid.org/0000-0001-8764-1959"},"institutions":[{"id":"https://openalex.org/I165690674","display_name":"Oregon Health & Science University","ror":"https://ror.org/009avj582","country_code":"US","type":"education","lineage":["https://openalex.org/I165690674"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Young Hwan Chang","raw_affiliation_strings":["Department of Biomedical Engineering, Oregon Health and Science University (OHSU), Portland, OR, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biomedical Engineering, Oregon Health and Science University (OHSU), Portland, OR, USA","institution_ids":["https://openalex.org/I165690674"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5089529308","display_name":"Guillaume Thibault","orcid":"https://orcid.org/0000-0002-5294-9184"},"institutions":[{"id":"https://openalex.org/I165690674","display_name":"Oregon Health & Science University","ror":"https://ror.org/009avj582","country_code":"US","type":"education","lineage":["https://openalex.org/I165690674"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Guillaume Thibault","raw_affiliation_strings":["Department of Biomedical Engineering, Oregon Health and Science University (OHSU), Portland, OR, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biomedical Engineering, Oregon Health and Science University (OHSU), Portland, OR, USA","institution_ids":["https://openalex.org/I165690674"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5024503743","display_name":"Vahid Azimi","orcid":"https://orcid.org/0000-0002-5694-3871"},"institutions":[{"id":"https://openalex.org/I165690674","display_name":"Oregon Health & Science University","ror":"https://ror.org/009avj582","country_code":"US","type":"education","lineage":["https://openalex.org/I165690674"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Vahid Azimi","raw_affiliation_strings":["Department of Biomedical Engineering, Oregon Health and Science University (OHSU), Portland, OR, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biomedical Engineering, Oregon Health and Science University (OHSU), Portland, OR, USA","institution_ids":["https://openalex.org/I165690674"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5058976660","display_name":"Brett Johnson","orcid":"https://orcid.org/0000-0001-6810-551X"},"institutions":[{"id":"https://openalex.org/I165690674","display_name":"Oregon Health & Science University","ror":"https://ror.org/009avj582","country_code":"US","type":"education","lineage":["https://openalex.org/I165690674"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Brett Johnson","raw_affiliation_strings":["Department of Biomedical Engineering, Oregon Health and Science University (OHSU), Portland, OR, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biomedical Engineering, Oregon Health and Science University (OHSU), Portland, OR, USA","institution_ids":["https://openalex.org/I165690674"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5072470315","display_name":"Danielle M. Jorgens","orcid":"https://orcid.org/0000-0002-7143-0118"},"institutions":[{"id":"https://openalex.org/I165690674","display_name":"Oregon Health & Science University","ror":"https://ror.org/009avj582","country_code":"US","type":"education","lineage":["https://openalex.org/I165690674"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Danielle Jorgens","raw_affiliation_strings":["Department of Biomedical Engineering, Oregon Health and Science University (OHSU), Portland, OR, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biomedical Engineering, Oregon Health and Science University (OHSU), Portland, OR, USA","institution_ids":["https://openalex.org/I165690674"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5030632046","display_name":"Jason M. Link","orcid":"https://orcid.org/0000-0002-6892-0431"},"institutions":[{"id":"https://openalex.org/I165690674","display_name":"Oregon Health & Science University","ror":"https://ror.org/009avj582","country_code":"US","type":"education","lineage":["https://openalex.org/I165690674"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jason Link","raw_affiliation_strings":["Department of Biomedical Engineering, Oregon Health and Science University (OHSU), Portland, OR, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biomedical Engineering, Oregon Health and Science University (OHSU), Portland, OR, USA","institution_ids":["https://openalex.org/I165690674"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Adam Margolin","orcid":null},"institutions":[{"id":"https://openalex.org/I165690674","display_name":"Oregon Health & Science University","ror":"https://ror.org/009avj582","country_code":"US","type":"education","lineage":["https://openalex.org/I165690674"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Adam Margolin","raw_affiliation_strings":["Department of Biomedical Engineering, Oregon Health and Science University (OHSU), Portland, OR, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biomedical Engineering, Oregon Health and Science University (OHSU), Portland, OR, USA","institution_ids":["https://openalex.org/I165690674"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5028899187","display_name":"Joe W. Gray","orcid":"https://orcid.org/0000-0001-9225-6756"},"institutions":[{"id":"https://openalex.org/I165690674","display_name":"Oregon Health & Science University","ror":"https://ror.org/009avj582","country_code":"US","type":"education","lineage":["https://openalex.org/I165690674"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Joe W. Gray","raw_affiliation_strings":["Department of Biomedical Engineering, Oregon Health and Science University (OHSU), Portland, OR, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biomedical Engineering, Oregon Health and Science University (OHSU), Portland, OR, USA","institution_ids":["https://openalex.org/I165690674"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I165690674"],"apc_list":null,"apc_paid":null,"fwci":3.5327,"has_fulltext":false,"cited_by_count":9,"citation_normalized_percentile":{"value":0.93903191,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":97},"biblio":{"volume":"45","issue":null,"first_page":"1175","last_page":"1178"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10862","display_name":"AI in cancer detection","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10862","display_name":"AI in cancer detection","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9990000128746033,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12874","display_name":"Digital Imaging for Blood Diseases","score":0.995199978351593,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5813961625099182},{"id":"https://openalex.org/keywords/cluster-analysis","display_name":"Cluster analysis","score":0.5450194478034973},{"id":"https://openalex.org/keywords/spatial-organization","display_name":"Spatial organization","score":0.5242835879325867},{"id":"https://openalex.org/keywords/segmentation","display_name":"Segmentation","score":0.4973168671131134},{"id":"https://openalex.org/keywords/spatial-analysis","display_name":"Spatial analysis","score":0.49238502979278564},{"id":"https://openalex.org/keywords/digital-pathology","display_name":"Digital pathology","score":0.4659024178981781},{"id":"https://openalex.org/keywords/eosin","display_name":"Eosin","score":0.45091161131858826},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.4184717833995819},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.40969884395599365},{"id":"https://openalex.org/keywords/statistics","display_name":"Statistics","score":0.36936575174331665},{"id":"https://openalex.org/keywords/pathology","display_name":"Pathology","score":0.28171446919441223},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.24820160865783691},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.17727237939834595},{"id":"https://openalex.org/keywords/staining","display_name":"Staining","score":0.16377171874046326},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.10360610485076904}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5813961625099182},{"id":"https://openalex.org/C73555534","wikidata":"https://www.wikidata.org/wiki/Q622825","display_name":"Cluster analysis","level":2,"score":0.5450194478034973},{"id":"https://openalex.org/C175779824","wikidata":"https://www.wikidata.org/wiki/Q7574078","display_name":"Spatial organization","level":2,"score":0.5242835879325867},{"id":"https://openalex.org/C89600930","wikidata":"https://www.wikidata.org/wiki/Q1423946","display_name":"Segmentation","level":2,"score":0.4973168671131134},{"id":"https://openalex.org/C159620131","wikidata":"https://www.wikidata.org/wiki/Q1938983","display_name":"Spatial analysis","level":2,"score":0.49238502979278564},{"id":"https://openalex.org/C2777522853","wikidata":"https://www.wikidata.org/wiki/Q5276128","display_name":"Digital pathology","level":2,"score":0.4659024178981781},{"id":"https://openalex.org/C2779751288","wikidata":"https://www.wikidata.org/wiki/Q422637","display_name":"Eosin","level":3,"score":0.45091161131858826},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.4184717833995819},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.40969884395599365},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.36936575174331665},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.28171446919441223},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.24820160865783691},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.17727237939834595},{"id":"https://openalex.org/C74864618","wikidata":"https://www.wikidata.org/wiki/Q2332446","display_name":"Staining","level":2,"score":0.16377171874046326},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.10360610485076904},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D002467","descriptor_name":"Cell Nucleus","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D002467","descriptor_name":"Cell Nucleus","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D002467","descriptor_name":"Cell Nucleus","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004801","descriptor_name":"Eosine Yellowish-(YS)","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004801","descriptor_name":"Eosine Yellowish-(YS)","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004801","descriptor_name":"Eosine Yellowish-(YS)","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006416","descriptor_name":"Hematoxylin","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006416","descriptor_name":"Hematoxylin","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006416","descriptor_name":"Hematoxylin","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013194","descriptor_name":"Staining and Labeling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D013194","descriptor_name":"Staining and Labeling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D013194","descriptor_name":"Staining and Labeling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D062206","descriptor_name":"Spatial Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D062206","descriptor_name":"Spatial Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D062206","descriptor_name":"Spatial Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1109/embc.2016.7590914","is_oa":false,"landing_page_url":"https://doi.org/10.1109/embc.2016.7590914","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2016 38th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC)","raw_type":"proceedings-article"},{"id":"pmid:28324942","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/28324942","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference","raw_type":null},{"id":"pmh:ark:/13030/qt41n6d96r","is_oa":false,"landing_page_url":null,"pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":null},{"id":"pmh:oai:escholarship.org:ark:/13030/qt41n6d96r","is_oa":true,"landing_page_url":"https://escholarship.org/uc/item/41n6d96r","pdf_url":null,"source":{"id":"https://openalex.org/S4306400115","display_name":"eScholarship (California Digital Library)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I2801248553","host_organization_name":"California Digital Library","host_organization_lineage":["https://openalex.org/I2801248553"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC), vol 2016","raw_type":"article"}],"best_oa_location":{"id":"pmh:oai:escholarship.org:ark:/13030/qt41n6d96r","is_oa":true,"landing_page_url":"https://escholarship.org/uc/item/41n6d96r","pdf_url":null,"source":{"id":"https://openalex.org/S4306400115","display_name":"eScholarship (California Digital Library)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I2801248553","host_organization_name":"California Digital Library","host_organization_lineage":["https://openalex.org/I2801248553"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC), vol 2016","raw_type":"article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/11","display_name":"Sustainable cities and communities","score":0.46000000834465027}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":14,"referenced_works":["https://openalex.org/W1996550590","https://openalex.org/W2039892899","https://openalex.org/W2041538370","https://openalex.org/W2051765910","https://openalex.org/W2089609272","https://openalex.org/W2091781764","https://openalex.org/W2103243046","https://openalex.org/W2110243528","https://openalex.org/W2131748184","https://openalex.org/W2138190368","https://openalex.org/W2143055991","https://openalex.org/W2148743296","https://openalex.org/W4299677235","https://openalex.org/W6680211808"],"related_works":["https://openalex.org/W1987052685","https://openalex.org/W2105299275","https://openalex.org/W2079644183","https://openalex.org/W1975767702","https://openalex.org/W2309512786","https://openalex.org/W2983081564","https://openalex.org/W2014392744","https://openalex.org/W3165349357","https://openalex.org/W4289108573","https://openalex.org/W3022836409"],"abstract_inverted_index":{"The":[0],"cellular":[1,53,76,119,135],"heterogeneity":[2],"and":[3,21,30,43,111,133],"complex":[4],"tissue":[5,24,69],"architecture":[6],"of":[7,28,36,46,67,74],"most":[8],"tumor":[9],"samples":[10],"is":[11],"a":[12,91],"major":[13],"obstacle":[14],"in":[15,52,89,95],"image":[16],"analysis":[17,125,130],"on":[18],"standard":[19],"hematoxylin":[20],"eosin-stained":[22],"(H&E)":[23],"sections.":[25,70],"A":[26],"mixture":[27],"cancer":[29],"normal":[31],"cells":[32,47],"complicates":[33],"the":[34,72,96],"interpretation":[35],"their":[37],"cytological":[38],"profiles.":[39],"Furthermore,":[40],"spatial":[41,105,109,123],"arrangement":[42,110],"architectural":[44],"organization":[45],"are":[48,99,114],"generally":[49],"not":[50,115],"reflected":[51],"characteristics":[54,136],"analysis.":[55,137],"To":[56],"address":[57],"these":[58],"challenges,":[59],"first":[60],"we":[61,78],"describe":[62],"an":[63],"automatic":[64],"nuclei":[65,88,94],"segmentation":[66],"H&E":[68,128],"In":[71],"task":[73],"deconvoluting":[75],"heterogeneity,":[77],"adopt":[79],"Landmark":[80],"based":[81],"Spectral":[82],"Clustering":[83],"(LSC)":[84],"to":[85],"group":[86,98],"individual":[87,118],"such":[90],"way":[92],"that":[93],"same":[97],"more":[100],"similar.":[101],"We":[102],"next":[103],"devise":[104],"statistics":[106,124],"for":[107],"analyzing":[108],"organization,":[112],"which":[113],"detectable":[116],"by":[117,131],"characteristics.":[120],"Our":[121],"quantitative,":[122],"could":[126],"benefit":[127],"section":[129],"refining":[132],"complementing":[134]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2019,"cited_by_count":3},{"year":2018,"cited_by_count":2},{"year":2017,"cited_by_count":3}],"updated_date":"2026-06-26T08:34:08.712188","created_date":"2025-10-10T00:00:00"}
