{"id":"https://openalex.org/W4388409036","doi":"https://doi.org/10.1109/dsaa60987.2023.10302484","title":"Optimizing Resource Allocation for Tumor Simulations over HPC Infrastructures","display_name":"Optimizing Resource Allocation for Tumor Simulations over HPC Infrastructures","publication_year":2023,"publication_date":"2023-10-09","ids":{"openalex":"https://openalex.org/W4388409036","doi":"https://doi.org/10.1109/dsaa60987.2023.10302484"},"language":"en","primary_location":{"id":"doi:10.1109/dsaa60987.2023.10302484","is_oa":false,"landing_page_url":"https://doi.org/10.1109/dsaa60987.2023.10302484","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2023 IEEE 10th International Conference on Data Science and Advanced Analytics (DSAA)","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://upcommons.upc.edu/bitstreams/2c56947e-795a-491c-b21a-99a9bc6f8232/download","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5041386803","display_name":"Errikos Streviniotis","orcid":null},"institutions":[{"id":"https://openalex.org/I55741626","display_name":"Technical University of Crete","ror":"https://ror.org/03f8bz564","country_code":"GR","type":"education","lineage":["https://openalex.org/I55741626"]}],"countries":["GR"],"is_corresponding":false,"raw_author_name":"Errikos Streviniotis","raw_affiliation_strings":["Technical University of Crete,Athena Research Center","Athena Research Center, Technical University of Crete"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Technical University of Crete,Athena Research Center","institution_ids":["https://openalex.org/I55741626"]},{"raw_affiliation_string":"Athena Research Center, Technical University of Crete","institution_ids":["https://openalex.org/I55741626"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5015974731","display_name":"Nikos Giatrakos","orcid":"https://orcid.org/0000-0002-8218-707X"},"institutions":[{"id":"https://openalex.org/I55741626","display_name":"Technical University of Crete","ror":"https://ror.org/03f8bz564","country_code":"GR","type":"education","lineage":["https://openalex.org/I55741626"]}],"countries":["GR"],"is_corresponding":false,"raw_author_name":"Nikos Giatrakos","raw_affiliation_strings":["Technical University of Crete,Athena Research Center","Athena Research Center, Technical University of Crete"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Technical University of Crete,Athena Research Center","institution_ids":["https://openalex.org/I55741626"]},{"raw_affiliation_string":"Athena Research Center, Technical University of Crete","institution_ids":["https://openalex.org/I55741626"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5055320698","display_name":"Yannis Kotidis","orcid":null},"institutions":[{"id":"https://openalex.org/I73142707","display_name":"Athens University of Economics and Business","ror":"https://ror.org/03s262162","country_code":"GR","type":"education","lineage":["https://openalex.org/I73142707"]}],"countries":["GR"],"is_corresponding":false,"raw_author_name":"Yannis Kotidis","raw_affiliation_strings":["Athens University of Economics and Business"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Athens University of Economics and Business","institution_ids":["https://openalex.org/I73142707"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5091334141","display_name":"Thaleia Ntiniakou","orcid":"https://orcid.org/0000-0001-6470-9885"},"institutions":[{"id":"https://openalex.org/I2799803557","display_name":"Barcelona Supercomputing Center","ror":"https://ror.org/05sd8tv96","country_code":"ES","type":"facility","lineage":["https://openalex.org/I2799803557","https://openalex.org/I9617848"]},{"id":"https://openalex.org/I9617848","display_name":"Universitat Polit\u00e8cnica de Catalunya","ror":"https://ror.org/03mb6wj31","country_code":"ES","type":"education","lineage":["https://openalex.org/I9617848"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Thaleia Ntiniakou","raw_affiliation_strings":["Barcelona Supercomputing Center"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Barcelona Supercomputing Center","institution_ids":["https://openalex.org/I9617848","https://openalex.org/I2799803557"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5007632406","display_name":"Miguel Ponce-de-Le\u00f3n","orcid":"https://orcid.org/0000-0002-7496-844X"},"institutions":[{"id":"https://openalex.org/I2799803557","display_name":"Barcelona Supercomputing Center","ror":"https://ror.org/05sd8tv96","country_code":"ES","type":"facility","lineage":["https://openalex.org/I2799803557","https://openalex.org/I9617848"]},{"id":"https://openalex.org/I9617848","display_name":"Universitat Polit\u00e8cnica de Catalunya","ror":"https://ror.org/03mb6wj31","country_code":"ES","type":"education","lineage":["https://openalex.org/I9617848"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Miguel Ponce de Leon","raw_affiliation_strings":["Barcelona Supercomputing Center"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Barcelona Supercomputing Center","institution_ids":["https://openalex.org/I9617848","https://openalex.org/I2799803557"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":true,"cited_by_count":2,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"1","last_page":"10"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11287","display_name":"Cancer Genomics and Diagnostics","score":0.9922000169754028,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11287","display_name":"Cancer Genomics and Diagnostics","score":0.9922000169754028,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10715","display_name":"Distributed and Parallel Computing Systems","score":0.9873999953269958,"subfield":{"id":"https://openalex.org/subfields/1705","display_name":"Computer Networks and Communications"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9853000044822693,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/supercomputer","display_name":"Supercomputer","score":0.7478044629096985},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7389051914215088},{"id":"https://openalex.org/keywords/allocator","display_name":"Allocator","score":0.6750089526176453},{"id":"https://openalex.org/keywords/resource","display_name":"Resource (disambiguation)","score":0.5336378812789917},{"id":"https://openalex.org/keywords/execution-time","display_name":"Execution time","score":0.5307690501213074},{"id":"https://openalex.org/keywords/resource-allocation","display_name":"Resource allocation","score":0.47958269715309143},{"id":"https://openalex.org/keywords/distributed-computing","display_name":"Distributed computing","score":0.381666898727417},{"id":"https://openalex.org/keywords/parallel-computing","display_name":"Parallel computing","score":0.2978511452674866},{"id":"https://openalex.org/keywords/computer-network","display_name":"Computer network","score":0.12669751048088074}],"concepts":[{"id":"https://openalex.org/C83283714","wikidata":"https://www.wikidata.org/wiki/Q121117","display_name":"Supercomputer","level":2,"score":0.7478044629096985},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7389051914215088},{"id":"https://openalex.org/C162262903","wikidata":"https://www.wikidata.org/wiki/Q343527","display_name":"Allocator","level":2,"score":0.6750089526176453},{"id":"https://openalex.org/C206345919","wikidata":"https://www.wikidata.org/wiki/Q20380951","display_name":"Resource (disambiguation)","level":2,"score":0.5336378812789917},{"id":"https://openalex.org/C2989134064","wikidata":"https://www.wikidata.org/wiki/Q288510","display_name":"Execution time","level":2,"score":0.5307690501213074},{"id":"https://openalex.org/C29202148","wikidata":"https://www.wikidata.org/wiki/Q287260","display_name":"Resource allocation","level":2,"score":0.47958269715309143},{"id":"https://openalex.org/C120314980","wikidata":"https://www.wikidata.org/wiki/Q180634","display_name":"Distributed computing","level":1,"score":0.381666898727417},{"id":"https://openalex.org/C173608175","wikidata":"https://www.wikidata.org/wiki/Q232661","display_name":"Parallel computing","level":1,"score":0.2978511452674866},{"id":"https://openalex.org/C31258907","wikidata":"https://www.wikidata.org/wiki/Q1301371","display_name":"Computer network","level":1,"score":0.12669751048088074}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1109/dsaa60987.2023.10302484","is_oa":false,"landing_page_url":"https://doi.org/10.1109/dsaa60987.2023.10302484","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2023 IEEE 10th International Conference on Data Science and Advanced Analytics (DSAA)","raw_type":"proceedings-article"},{"id":"pmh:oai:upcommons.upc.edu:2117/403217","is_oa":true,"landing_page_url":"https://hdl.handle.net/2117/403217","pdf_url":"https://upcommons.upc.edu/bitstreams/2c56947e-795a-491c-b21a-99a9bc6f8232/download","source":{"id":"https://openalex.org/S4377196262","display_name":"UPCommons institutional repository (Universitat Polit\u00e8cnica de Catalunya)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I9617848","host_organization_name":"Universitat Polit\u00e8cnica de Catalunya","host_organization_lineage":["https://openalex.org/I9617848"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Conference lecture"},{"id":"pmh:oai:zenodo.org:10077501","is_oa":true,"landing_page_url":"https://doi.org/10.1109/DSAA60987.2023.10302484","pdf_url":null,"source":{"id":"https://openalex.org/S4306400562","display_name":"Zenodo (CERN European Organization for Nuclear Research)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I67311998","host_organization_name":"European Organization for Nuclear Research","host_organization_lineage":["https://openalex.org/I67311998"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"info:eu-repo/semantics/other"}],"best_oa_location":{"id":"pmh:oai:upcommons.upc.edu:2117/403217","is_oa":true,"landing_page_url":"https://hdl.handle.net/2117/403217","pdf_url":"https://upcommons.upc.edu/bitstreams/2c56947e-795a-491c-b21a-99a9bc6f8232/download","source":{"id":"https://openalex.org/S4377196262","display_name":"UPCommons institutional repository (Universitat Polit\u00e8cnica de Catalunya)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I9617848","host_organization_name":"Universitat Polit\u00e8cnica de Catalunya","host_organization_lineage":["https://openalex.org/I9617848"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Conference lecture"},"sustainable_development_goals":[{"score":0.6200000047683716,"display_name":"Industry, innovation and infrastructure","id":"https://metadata.un.org/sdg/9"}],"awards":[{"id":"https://openalex.org/G4726210797","display_name":null,"funder_award_id":"101092749","funder_id":"https://openalex.org/F4320334322","funder_display_name":"HORIZON EUROPE Framework Programme"}],"funders":[{"id":"https://openalex.org/F4320334322","display_name":"HORIZON EUROPE Framework Programme","ror":null}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4388409036.pdf","grobid_xml":"https://content.openalex.org/works/W4388409036.grobid-xml"},"referenced_works_count":27,"referenced_works":["https://openalex.org/W113632086","https://openalex.org/W1510052597","https://openalex.org/W2009443800","https://openalex.org/W2016389837","https://openalex.org/W2099201756","https://openalex.org/W2146014652","https://openalex.org/W2332366345","https://openalex.org/W2577455646","https://openalex.org/W2621895366","https://openalex.org/W2781578762","https://openalex.org/W2948513753","https://openalex.org/W2952588677","https://openalex.org/W2987126840","https://openalex.org/W3007086929","https://openalex.org/W3088243512","https://openalex.org/W3104631761","https://openalex.org/W3107968240","https://openalex.org/W3148709032","https://openalex.org/W3209211123","https://openalex.org/W4205879534","https://openalex.org/W4211049957","https://openalex.org/W4285607807","https://openalex.org/W4289534033","https://openalex.org/W4388035307","https://openalex.org/W6681529666","https://openalex.org/W6770057116","https://openalex.org/W6783151319"],"related_works":["https://openalex.org/W4252124899","https://openalex.org/W2043640140","https://openalex.org/W2122690624","https://openalex.org/W4250204977","https://openalex.org/W2018768276","https://openalex.org/W4312676584","https://openalex.org/W2062368290","https://openalex.org/W1991678311","https://openalex.org/W1898792937","https://openalex.org/W773165544"],"abstract_inverted_index":{"We":[0],"introduce":[1],"RATS":[2,24,61],"(Resource":[3],"Allocator":[4],"for":[5,11,56,116],"Tumor":[6],"Simulations),":[7],"the":[8,12,43,70,78,83],"first":[9],"optimizer":[10],"execution":[13,48,59],"of":[14,23,33,38,53,80],"tumor":[15,96],"simulations":[16],"over":[17],"HPC":[18,91],"infrastructures.":[19],"The":[20],"optimization":[21],"framework":[22],"incorporates":[25],"3":[26],"vital":[27],"performance":[28],"criteria":[29],"(i)":[30],"expected":[31],"utility":[32],"a":[34],"simulation":[35,47],"in":[36,103],"terms":[37],"effective":[39,107],"drug":[40,108],"combination":[41],"on":[42],"simulated":[44],"tumor,":[45],"(ii)":[46],"time":[49,113],"and":[50],"(iii)":[51],"number":[52],"cores":[54],"required":[55],"achieving":[57],"that":[58],"time.":[60],"is":[62],"to":[63,74,88,93,101,114],"be":[64],"used":[65],"by":[66],"life":[67],"scientists":[68],"at":[69],"Barcelona":[71],"Supercomputing":[72],"Center":[73],"not":[75],"only":[76],"remove":[77],"burden":[79],"blindly":[81],"guessing":[82],"core":[84],"hours":[85],"we":[86],"need":[87],"reserve":[89],"from":[90],"admins":[92],"study":[94],"various":[95],"treatment":[97],"methodologies,":[98],"but":[99],"also":[100],"help":[102],"more":[104],"rapidly":[105],"distinguishing":[106],"combinations,":[109],"thus,":[110],"potentially":[111],"cutting":[112],"market":[115],"new":[117],"cancer":[118],"therapies.":[119]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":1}],"updated_date":"2026-07-14T23:27:15.235271","created_date":"2025-10-10T00:00:00"}
