{"id":"https://openalex.org/W4319781907","doi":"https://doi.org/10.1109/dsaa54385.2022.10032340","title":"RL-MD: A Novel Reinforcement Learning Approach for DNA Motif Discovery","display_name":"RL-MD: A Novel Reinforcement Learning Approach for DNA Motif Discovery","publication_year":2022,"publication_date":"2022-10-13","ids":{"openalex":"https://openalex.org/W4319781907","doi":"https://doi.org/10.1109/dsaa54385.2022.10032340"},"language":"en","primary_location":{"id":"doi:10.1109/dsaa54385.2022.10032340","is_oa":false,"landing_page_url":"http://dx.doi.org/10.1109/dsaa54385.2022.10032340","pdf_url":null,"source":{"id":"https://openalex.org/S4363608340","display_name":"2022 IEEE 9th International Conference on Data Science and Advanced Analytics (DSAA)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"conference"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2022 IEEE 9th International Conference on Data Science and Advanced Analytics (DSAA)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100396372","display_name":"Wen Wang","orcid":"https://orcid.org/0000-0002-7801-2066"},"institutions":[{"id":"https://openalex.org/I4210152380","display_name":"Shenzhen Technology University","ror":"https://ror.org/04qzpec27","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210152380"]},{"id":"https://openalex.org/I4401726822","display_name":"Ping An (China)","ror":"https://ror.org/004yv2z91","country_code":null,"type":"company","lineage":["https://openalex.org/I4401726822"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Wen Wang","raw_affiliation_strings":["Ping An Technology (Shenzhen) Co., Ltd.,Shenzhen,China","Ping An Technology (Shenzhen) Co., Ltd., Shenzhen, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Ping An Technology (Shenzhen) Co., Ltd.,Shenzhen,China","institution_ids":["https://openalex.org/I4210152380","https://openalex.org/I4401726822"]},{"raw_affiliation_string":"Ping An Technology (Shenzhen) Co., Ltd., Shenzhen, China","institution_ids":["https://openalex.org/I4210152380","https://openalex.org/I4401726822"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5074472751","display_name":"Jianzong Wang","orcid":"https://orcid.org/0000-0002-9237-4231"},"institutions":[{"id":"https://openalex.org/I4210152380","display_name":"Shenzhen Technology University","ror":"https://ror.org/04qzpec27","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210152380"]},{"id":"https://openalex.org/I4401726822","display_name":"Ping An (China)","ror":"https://ror.org/004yv2z91","country_code":null,"type":"company","lineage":["https://openalex.org/I4401726822"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jianzong Wang","raw_affiliation_strings":["Ping An Technology (Shenzhen) Co., Ltd.,Shenzhen,China","Ping An Technology (Shenzhen) Co., Ltd., Shenzhen, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Ping An Technology (Shenzhen) Co., Ltd.,Shenzhen,China","institution_ids":["https://openalex.org/I4210152380","https://openalex.org/I4401726822"]},{"raw_affiliation_string":"Ping An Technology (Shenzhen) Co., Ltd., Shenzhen, China","institution_ids":["https://openalex.org/I4210152380","https://openalex.org/I4401726822"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5032913967","display_name":"Shijing Si","orcid":"https://orcid.org/0000-0003-4346-2574"},"institutions":[{"id":"https://openalex.org/I11406153","display_name":"Shanghai International Studies University","ror":"https://ror.org/01bn89z48","country_code":"CN","type":"education","lineage":["https://openalex.org/I11406153"]},{"id":"https://openalex.org/I4210152380","display_name":"Shenzhen Technology University","ror":"https://ror.org/04qzpec27","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210152380"]},{"id":"https://openalex.org/I4401726822","display_name":"Ping An (China)","ror":"https://ror.org/004yv2z91","country_code":null,"type":"company","lineage":["https://openalex.org/I4401726822"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Shijing Si","raw_affiliation_strings":["Ping An Technology (Shenzhen) Co., Ltd.,Shenzhen,China","Ping An Technology (Shenzhen) Co., Ltd., Shenzhen, China","School of Economics and Finance, Shanghai International Studies University, Shanghai, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Ping An Technology (Shenzhen) Co., Ltd.,Shenzhen,China","institution_ids":["https://openalex.org/I4210152380","https://openalex.org/I4401726822"]},{"raw_affiliation_string":"Ping An Technology (Shenzhen) Co., Ltd., Shenzhen, China","institution_ids":["https://openalex.org/I4210152380","https://openalex.org/I4401726822"]},{"raw_affiliation_string":"School of Economics and Finance, Shanghai International Studies University, Shanghai, China","institution_ids":["https://openalex.org/I11406153"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5034232964","display_name":"Zhangcheng Huang","orcid":"https://orcid.org/0000-0001-6563-7668"},"institutions":[{"id":"https://openalex.org/I4210152380","display_name":"Shenzhen Technology University","ror":"https://ror.org/04qzpec27","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210152380"]},{"id":"https://openalex.org/I4401726822","display_name":"Ping An (China)","ror":"https://ror.org/004yv2z91","country_code":null,"type":"company","lineage":["https://openalex.org/I4401726822"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhangcheng Huang","raw_affiliation_strings":["Ping An Technology (Shenzhen) Co., Ltd.,Shenzhen,China","Ping An Technology (Shenzhen) Co., Ltd., Shenzhen, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Ping An Technology (Shenzhen) Co., Ltd.,Shenzhen,China","institution_ids":["https://openalex.org/I4210152380","https://openalex.org/I4401726822"]},{"raw_affiliation_string":"Ping An Technology (Shenzhen) Co., Ltd., Shenzhen, China","institution_ids":["https://openalex.org/I4210152380","https://openalex.org/I4401726822"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5016038454","display_name":"Jing Xiao","orcid":"https://orcid.org/0000-0001-9615-4749"},"institutions":[{"id":"https://openalex.org/I4210152380","display_name":"Shenzhen Technology University","ror":"https://ror.org/04qzpec27","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210152380"]},{"id":"https://openalex.org/I4401726822","display_name":"Ping An (China)","ror":"https://ror.org/004yv2z91","country_code":null,"type":"company","lineage":["https://openalex.org/I4401726822"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jing Xiao","raw_affiliation_strings":["Ping An Technology (Shenzhen) Co., Ltd.,Shenzhen,China","Ping An Technology (Shenzhen) Co., Ltd., Shenzhen, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Ping An Technology (Shenzhen) Co., Ltd.,Shenzhen,China","institution_ids":["https://openalex.org/I4210152380","https://openalex.org/I4401726822"]},{"raw_affiliation_string":"Ping An Technology (Shenzhen) Co., Ltd., Shenzhen, China","institution_ids":["https://openalex.org/I4210152380","https://openalex.org/I4401726822"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.48937844,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"8","issue":null,"first_page":"1","last_page":"7"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10222","display_name":"Genomics and Chromatin Dynamics","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10222","display_name":"Genomics and Chromatin Dynamics","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9965000152587891,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9944000244140625,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/motif","display_name":"Motif (music)","score":0.8129411339759827},{"id":"https://openalex.org/keywords/reinforcement-learning","display_name":"Reinforcement learning","score":0.7971805334091187},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6903464794158936},{"id":"https://openalex.org/keywords/sequence-motif","display_name":"Sequence motif","score":0.6282824277877808},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5400856733322144},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.4454379081726074},{"id":"https://openalex.org/keywords/drug-discovery","display_name":"Drug discovery","score":0.43727993965148926},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.39431118965148926},{"id":"https://openalex.org/keywords/dna","display_name":"DNA","score":0.38457781076431274},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.2264578640460968},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.1910131573677063},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.12301743030548096}],"concepts":[{"id":"https://openalex.org/C32276052","wikidata":"https://www.wikidata.org/wiki/Q908349","display_name":"Motif (music)","level":2,"score":0.8129411339759827},{"id":"https://openalex.org/C97541855","wikidata":"https://www.wikidata.org/wiki/Q830687","display_name":"Reinforcement learning","level":2,"score":0.7971805334091187},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6903464794158936},{"id":"https://openalex.org/C117745874","wikidata":"https://www.wikidata.org/wiki/Q901612","display_name":"Sequence motif","level":3,"score":0.6282824277877808},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5400856733322144},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.4454379081726074},{"id":"https://openalex.org/C74187038","wikidata":"https://www.wikidata.org/wiki/Q1418791","display_name":"Drug discovery","level":2,"score":0.43727993965148926},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.39431118965148926},{"id":"https://openalex.org/C552990157","wikidata":"https://www.wikidata.org/wiki/Q7430","display_name":"DNA","level":2,"score":0.38457781076431274},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.2264578640460968},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.1910131573677063},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.12301743030548096},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0},{"id":"https://openalex.org/C24890656","wikidata":"https://www.wikidata.org/wiki/Q82811","display_name":"Acoustics","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/dsaa54385.2022.10032340","is_oa":false,"landing_page_url":"http://dx.doi.org/10.1109/dsaa54385.2022.10032340","pdf_url":null,"source":{"id":"https://openalex.org/S4363608340","display_name":"2022 IEEE 9th International Conference on Data Science and Advanced Analytics (DSAA)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"conference"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2022 IEEE 9th International Conference on Data Science and Advanced Analytics (DSAA)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320337504","display_name":"Research and Development","ror":"https://ror.org/027s68j25"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":44,"referenced_works":["https://openalex.org/W324535036","https://openalex.org/W1019830208","https://openalex.org/W1590648220","https://openalex.org/W1972792790","https://openalex.org/W1978173716","https://openalex.org/W2001682071","https://openalex.org/W2009853003","https://openalex.org/W2038093918","https://openalex.org/W2049868101","https://openalex.org/W2051640319","https://openalex.org/W2071037669","https://openalex.org/W2073850887","https://openalex.org/W2080498142","https://openalex.org/W2086273821","https://openalex.org/W2087700126","https://openalex.org/W2097175728","https://openalex.org/W2102619694","https://openalex.org/W2103777723","https://openalex.org/W2110738405","https://openalex.org/W2115577355","https://openalex.org/W2118258530","https://openalex.org/W2121356022","https://openalex.org/W2129795133","https://openalex.org/W2139398143","https://openalex.org/W2145339207","https://openalex.org/W2156626022","https://openalex.org/W2162530919","https://openalex.org/W2171286893","https://openalex.org/W2195190137","https://openalex.org/W2345512687","https://openalex.org/W2751814741","https://openalex.org/W2775482448","https://openalex.org/W2782544296","https://openalex.org/W2785792383","https://openalex.org/W2789652838","https://openalex.org/W2795735651","https://openalex.org/W2952935243","https://openalex.org/W3090491025","https://openalex.org/W3215596355","https://openalex.org/W4212774754","https://openalex.org/W6635200387","https://openalex.org/W6641001594","https://openalex.org/W6683204974","https://openalex.org/W6684205842"],"related_works":["https://openalex.org/W3170299350","https://openalex.org/W2368410102","https://openalex.org/W2368037387","https://openalex.org/W2073661767","https://openalex.org/W2380185347","https://openalex.org/W2370034659","https://openalex.org/W2159636084","https://openalex.org/W2117168988","https://openalex.org/W2103777723","https://openalex.org/W2610941444"],"abstract_inverted_index":{"The":[0,98],"extraction":[1],"of":[2,8,52],"sequence":[3],"patterns":[4],"from":[5],"a":[6,23,62,80],"collection":[7],"functionally":[9],"linked":[10],"unlabeled":[11],"DNA":[12,17,69],"sequences":[13],"is":[14,22],"known":[15],"as":[16,77,95],"motif":[18,70],"discovery,":[19],"and":[20,89],"it":[21],"key":[24],"task":[25],"in":[26,48,107],"computational":[27],"biology.":[28],"Several":[29],"deep":[30],"learning-based":[31],"techniques":[32],"have":[33],"recently":[34],"been":[35],"introduced":[36],"to":[37,84],"address":[38],"this":[39],"issue.":[40],"However,":[41],"these":[42,91],"algorithms":[43],"can":[44,103],"not":[45],"be":[46],"used":[47],"real-world":[49,108],"situations":[50],"because":[51],"the":[53,96],"need":[54],"for":[55,68],"labeled":[56],"data.":[57,109],"Here,":[58],"we":[59],"presented":[60],"RL-MD,":[61],"novel":[63],"reinforcement":[64],"learning":[65],"based":[66],"approach":[67],"discovery":[71],"task.":[72],"RL-MD":[73,102],"takes":[74],"unlabelled":[75],"data":[76],"input,":[78],"employs":[79],"relative":[81],"information-based":[82],"method":[83],"evaluate":[85],"each":[86],"proposed":[87],"motif,":[88],"utilizes":[90],"continuous":[92],"evaluation":[93],"results":[94],"reward.":[97],"experiments":[99],"show":[100],"that":[101],"identify":[104],"high-quality":[105],"motifs":[106]},"counts_by_year":[],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}
