{"id":"https://openalex.org/W2116223269","doi":"https://doi.org/10.1109/cyber.2003.1253492","title":"CyberparaBLAST: the parallelized BLAST Web server","display_name":"CyberparaBLAST: the parallelized BLAST Web server","publication_year":2004,"publication_date":"2004-05-13","ids":{"openalex":"https://openalex.org/W2116223269","doi":"https://doi.org/10.1109/cyber.2003.1253492","mag":"2116223269"},"language":"en","primary_location":{"id":"doi:10.1109/cyber.2003.1253492","is_oa":false,"landing_page_url":"https://doi.org/10.1109/cyber.2003.1253492","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings. 2003 International Conference on Cyberworlds","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5102216453","display_name":"Qi Yutao","orcid":null},"institutions":[{"id":"https://openalex.org/I172675005","display_name":"Nanyang Technological University","ror":"https://ror.org/02e7b5302","country_code":"SG","type":"education","lineage":["https://openalex.org/I172675005"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Qi Yutao","raw_affiliation_strings":["BioInformatics Research Center School of Computer Engineering, Nanyang Technological University, Singapore","Sch. of Comput. Eng., Nanyang Technol. Univ., Singapore#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BioInformatics Research Center School of Computer Engineering, Nanyang Technological University, Singapore","institution_ids":["https://openalex.org/I172675005"]},{"raw_affiliation_string":"Sch. of Comput. Eng., Nanyang Technol. Univ., Singapore#TAB#","institution_ids":["https://openalex.org/I172675005"]}]},{"author_position":"last","author":{"id":null,"display_name":"Lin Feng","orcid":null},"institutions":[{"id":"https://openalex.org/I172675005","display_name":"Nanyang Technological University","ror":"https://ror.org/02e7b5302","country_code":"SG","type":"education","lineage":["https://openalex.org/I172675005"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Lin Feng","raw_affiliation_strings":["BioInformatics Research Center School of Computer Engineering, Nanyang Technological University, Singapore","Sch. of Comput. Eng., Nanyang Technol. Univ., Singapore#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BioInformatics Research Center School of Computer Engineering, Nanyang Technological University, Singapore","institution_ids":["https://openalex.org/I172675005"]},{"raw_affiliation_string":"Sch. of Comput. Eng., Nanyang Technol. Univ., Singapore#TAB#","institution_ids":["https://openalex.org/I172675005"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I172675005"],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":4,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"474","last_page":"477"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9983999729156494,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9983999729156494,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9945999979972839,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9855999946594238,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8465273976325989},{"id":"https://openalex.org/keywords/web-server","display_name":"Web server","score":0.6250213384628296},{"id":"https://openalex.org/keywords/intranet","display_name":"Intranet","score":0.5685234069824219},{"id":"https://openalex.org/keywords/server","display_name":"Server","score":0.5098645091056824},{"id":"https://openalex.org/keywords/node","display_name":"Node (physics)","score":0.4932653307914734},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.42276668548583984},{"id":"https://openalex.org/keywords/web-api","display_name":"Web API","score":0.41679060459136963},{"id":"https://openalex.org/keywords/web-page","display_name":"Web page","score":0.4132949113845825},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.36033231019973755},{"id":"https://openalex.org/keywords/the-internet","display_name":"The Internet","score":0.31393080949783325}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8465273976325989},{"id":"https://openalex.org/C11392498","wikidata":"https://www.wikidata.org/wiki/Q11288","display_name":"Web server","level":3,"score":0.6250213384628296},{"id":"https://openalex.org/C2778059363","wikidata":"https://www.wikidata.org/wiki/Q483426","display_name":"Intranet","level":3,"score":0.5685234069824219},{"id":"https://openalex.org/C93996380","wikidata":"https://www.wikidata.org/wiki/Q44127","display_name":"Server","level":2,"score":0.5098645091056824},{"id":"https://openalex.org/C62611344","wikidata":"https://www.wikidata.org/wiki/Q1062658","display_name":"Node (physics)","level":2,"score":0.4932653307914734},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.42276668548583984},{"id":"https://openalex.org/C127613066","wikidata":"https://www.wikidata.org/wiki/Q557770","display_name":"Web API","level":4,"score":0.41679060459136963},{"id":"https://openalex.org/C21959979","wikidata":"https://www.wikidata.org/wiki/Q36774","display_name":"Web page","level":2,"score":0.4132949113845825},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.36033231019973755},{"id":"https://openalex.org/C110875604","wikidata":"https://www.wikidata.org/wiki/Q75","display_name":"The Internet","level":2,"score":0.31393080949783325},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.0},{"id":"https://openalex.org/C66938386","wikidata":"https://www.wikidata.org/wiki/Q633538","display_name":"Structural engineering","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/cyber.2003.1253492","is_oa":false,"landing_page_url":"https://doi.org/10.1109/cyber.2003.1253492","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings. 2003 International Conference on Cyberworlds","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":11,"referenced_works":["https://openalex.org/W2002180966","https://openalex.org/W2003144438","https://openalex.org/W2055043387","https://openalex.org/W2081612620","https://openalex.org/W2130479394","https://openalex.org/W2132536544","https://openalex.org/W2158714788","https://openalex.org/W2505028576","https://openalex.org/W3189823449","https://openalex.org/W4213149192","https://openalex.org/W4236236547"],"related_works":["https://openalex.org/W2626999804","https://openalex.org/W4250004941","https://openalex.org/W2736202444","https://openalex.org/W2049015391","https://openalex.org/W2137014442","https://openalex.org/W1533158771","https://openalex.org/W122082928","https://openalex.org/W2104288289","https://openalex.org/W2521397622","https://openalex.org/W4294067941"],"abstract_inverted_index":{"Retrieving":[0],"homologous":[1,29],"sequences":[2,30],"from":[3,31],"existing":[4,32],"databases,":[5],"for":[6,12,27],"instance,":[7],"is":[8],"a":[9,40,53],"fundamental":[10],"routine":[11],"the":[13,19,44,79,88,100,106],"bioinformatics":[14,101],"research":[15,102],"community.":[16],"Programs":[17],"of":[18,43,81,108],"NCBI":[20],"BLAST":[21,45],"family":[22],"have":[23],"been":[24],"widely":[25],"used":[26],"retrieving":[28],"databases.":[33],"This":[34],"article":[35],"briefly":[36],"introduces":[37],"and":[38,58],"evaluates":[39],"parallelized":[41],"version":[42],"algorithm":[46],"using":[47],"Message":[48],"Passing":[49],"Interface":[50],"(MPI)":[51],"on":[52,73],"multi-node":[54],"compute":[55],"cluster,":[56],"paraBLAST":[57],"its":[59],"Web":[60,65,71,75],"server,":[61],"CyberparaBLAST.":[62,109],"The":[63],"CyberparaBLAST":[64,77],"server":[66],"can":[67],"be":[68],"accessed":[69],"through":[70],"browsers":[72],"intranet":[74],"servers.":[76],"enables":[78],"researchers":[80],"institutes":[82],"to":[83],"query":[84],"sequence":[85],"databases":[86],"in":[87],"real":[89],"time":[90],"when":[91],"needed.":[92],"Parallelized":[93],"computing":[94],"together":[95],"with":[96,105],"cyber":[97],"access":[98],"make":[99],"more":[103],"efficient":[104],"aid":[107]},"counts_by_year":[{"year":2015,"cited_by_count":2}],"updated_date":"2026-07-14T23:27:15.235271","created_date":"2025-10-10T00:00:00"}
