{"id":"https://openalex.org/W2013285325","doi":"https://doi.org/10.1109/cvpr.2012.6247722","title":"Automated reconstruction of tree structures using path classifiers and Mixed Integer Programming","display_name":"Automated reconstruction of tree structures using path classifiers and Mixed Integer Programming","publication_year":2012,"publication_date":"2012-06-01","ids":{"openalex":"https://openalex.org/W2013285325","doi":"https://doi.org/10.1109/cvpr.2012.6247722","mag":"2013285325"},"language":"en","primary_location":{"id":"doi:10.1109/cvpr.2012.6247722","is_oa":false,"landing_page_url":"https://doi.org/10.1109/cvpr.2012.6247722","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2012 IEEE Conference on Computer Vision and Pattern Recognition","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"http://infoscience.epfl.ch/record/176222","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5057420317","display_name":"Engin T\u00fcretken","orcid":null},"institutions":[{"id":"https://openalex.org/I5124864","display_name":"\u00c9cole Polytechnique F\u00e9d\u00e9rale de Lausanne","ror":"https://ror.org/02s376052","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I5124864"]}],"countries":["CH"],"is_corresponding":true,"raw_author_name":"E. Turetken","raw_affiliation_strings":["Computer Vision Laboratory, EPF Lausanne, Lausanne, Switzerland","Computer Vision Laboratory (EPFL), Lausanne, Switzerland, CH-1015 Lausanne, Switzerland#TAB#"],"affiliations":[{"raw_affiliation_string":"Computer Vision Laboratory, EPF Lausanne, Lausanne, Switzerland","institution_ids":["https://openalex.org/I5124864"]},{"raw_affiliation_string":"Computer Vision Laboratory (EPFL), Lausanne, Switzerland, CH-1015 Lausanne, Switzerland#TAB#","institution_ids":["https://openalex.org/I5124864"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5019868420","display_name":"Fethallah Benmansour","orcid":null},"institutions":[{"id":"https://openalex.org/I5124864","display_name":"\u00c9cole Polytechnique F\u00e9d\u00e9rale de Lausanne","ror":"https://ror.org/02s376052","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I5124864"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"F. Benmansour","raw_affiliation_strings":["Computer Vision Laboratory, EPF Lausanne, Lausanne, Switzerland","Computer Vision Laboratory (EPFL), Lausanne, Switzerland, CH-1015 Lausanne, Switzerland#TAB#"],"affiliations":[{"raw_affiliation_string":"Computer Vision Laboratory, EPF Lausanne, Lausanne, Switzerland","institution_ids":["https://openalex.org/I5124864"]},{"raw_affiliation_string":"Computer Vision Laboratory (EPFL), Lausanne, Switzerland, CH-1015 Lausanne, Switzerland#TAB#","institution_ids":["https://openalex.org/I5124864"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5038674741","display_name":"Pascal Fua","orcid":"https://orcid.org/0000-0002-6702-9970"},"institutions":[{"id":"https://openalex.org/I5124864","display_name":"\u00c9cole Polytechnique F\u00e9d\u00e9rale de Lausanne","ror":"https://ror.org/02s376052","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I5124864"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"P. Fua","raw_affiliation_strings":["Computer Vision Laboratory, EPF Lausanne, Lausanne, Switzerland","Computer Vision Laboratory (EPFL), Lausanne, Switzerland, CH-1015 Lausanne, Switzerland#TAB#"],"affiliations":[{"raw_affiliation_string":"Computer Vision Laboratory, EPF Lausanne, Lausanne, Switzerland","institution_ids":["https://openalex.org/I5124864"]},{"raw_affiliation_string":"Computer Vision Laboratory (EPFL), Lausanne, Switzerland, CH-1015 Lausanne, Switzerland#TAB#","institution_ids":["https://openalex.org/I5124864"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5057420317"],"corresponding_institution_ids":["https://openalex.org/I5124864"],"apc_list":null,"apc_paid":null,"fwci":10.8863,"has_fulltext":false,"cited_by_count":88,"citation_normalized_percentile":{"value":0.98577778,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":100},"biblio":{"volume":null,"issue":null,"first_page":"566","last_page":"573"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10531","display_name":"Advanced Vision and Imaging","score":0.9965999722480774,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":0.9842000007629395,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/integer-programming","display_name":"Integer programming","score":0.6461502313613892},{"id":"https://openalex.org/keywords/weighting","display_name":"Weighting","score":0.6336223483085632},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5919142365455627},{"id":"https://openalex.org/keywords/spanning-tree","display_name":"Spanning tree","score":0.5665240287780762},{"id":"https://openalex.org/keywords/linear-programming","display_name":"Linear programming","score":0.5200157165527344},{"id":"https://openalex.org/keywords/graph","display_name":"Graph","score":0.4793001711368561},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.4773193299770355},{"id":"https://openalex.org/keywords/ground-truth","display_name":"Ground truth","score":0.4608366787433624},{"id":"https://openalex.org/keywords/automation","display_name":"Automation","score":0.4586939215660095},{"id":"https://openalex.org/keywords/path","display_name":"Path (computing)","score":0.4278348684310913},{"id":"https://openalex.org/keywords/tracing","display_name":"Tracing","score":0.4120023846626282},{"id":"https://openalex.org/keywords/quadratic-programming","display_name":"Quadratic programming","score":0.4113170802593231},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.3751054108142853},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.3218024969100952},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.26932841539382935},{"id":"https://openalex.org/keywords/mathematical-optimization","display_name":"Mathematical optimization","score":0.23843765258789062},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.20120173692703247},{"id":"https://openalex.org/keywords/combinatorics","display_name":"Combinatorics","score":0.13569891452789307}],"concepts":[{"id":"https://openalex.org/C56086750","wikidata":"https://www.wikidata.org/wiki/Q6042592","display_name":"Integer programming","level":2,"score":0.6461502313613892},{"id":"https://openalex.org/C183115368","wikidata":"https://www.wikidata.org/wiki/Q856577","display_name":"Weighting","level":2,"score":0.6336223483085632},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5919142365455627},{"id":"https://openalex.org/C64331007","wikidata":"https://www.wikidata.org/wiki/Q831672","display_name":"Spanning tree","level":2,"score":0.5665240287780762},{"id":"https://openalex.org/C41045048","wikidata":"https://www.wikidata.org/wiki/Q202843","display_name":"Linear programming","level":2,"score":0.5200157165527344},{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.4793001711368561},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.4773193299770355},{"id":"https://openalex.org/C146849305","wikidata":"https://www.wikidata.org/wiki/Q370766","display_name":"Ground truth","level":2,"score":0.4608366787433624},{"id":"https://openalex.org/C115901376","wikidata":"https://www.wikidata.org/wiki/Q184199","display_name":"Automation","level":2,"score":0.4586939215660095},{"id":"https://openalex.org/C2777735758","wikidata":"https://www.wikidata.org/wiki/Q817765","display_name":"Path (computing)","level":2,"score":0.4278348684310913},{"id":"https://openalex.org/C138673069","wikidata":"https://www.wikidata.org/wiki/Q322229","display_name":"Tracing","level":2,"score":0.4120023846626282},{"id":"https://openalex.org/C81845259","wikidata":"https://www.wikidata.org/wiki/Q290117","display_name":"Quadratic programming","level":2,"score":0.4113170802593231},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.3751054108142853},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.3218024969100952},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.26932841539382935},{"id":"https://openalex.org/C126255220","wikidata":"https://www.wikidata.org/wiki/Q141495","display_name":"Mathematical optimization","level":1,"score":0.23843765258789062},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.20120173692703247},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.13569891452789307},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.0},{"id":"https://openalex.org/C126838900","wikidata":"https://www.wikidata.org/wiki/Q77604","display_name":"Radiology","level":1,"score":0.0},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.0},{"id":"https://openalex.org/C78519656","wikidata":"https://www.wikidata.org/wiki/Q101333","display_name":"Mechanical engineering","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1109/cvpr.2012.6247722","is_oa":false,"landing_page_url":"https://doi.org/10.1109/cvpr.2012.6247722","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2012 IEEE Conference on Computer Vision and Pattern Recognition","raw_type":"proceedings-article"},{"id":"pmh:oai:infoscience.tind.io:176222","is_oa":true,"landing_page_url":"http://infoscience.epfl.ch/record/176222","pdf_url":null,"source":{"id":"https://openalex.org/S4306400487","display_name":"Infoscience (Ecole Polytechnique F\u00e9d\u00e9rale de Lausanne)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"conference proceedings"}],"best_oa_location":{"id":"pmh:oai:infoscience.tind.io:176222","is_oa":true,"landing_page_url":"http://infoscience.epfl.ch/record/176222","pdf_url":null,"source":{"id":"https://openalex.org/S4306400487","display_name":"Infoscience (Ecole Polytechnique F\u00e9d\u00e9rale de Lausanne)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"conference proceedings"},"sustainable_development_goals":[{"score":0.4699999988079071,"display_name":"Sustainable cities and communities","id":"https://metadata.un.org/sdg/11"}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":29,"referenced_works":["https://openalex.org/W1480380503","https://openalex.org/W1487602158","https://openalex.org/W1502565078","https://openalex.org/W1511279056","https://openalex.org/W1559344731","https://openalex.org/W1797286681","https://openalex.org/W1986141983","https://openalex.org/W2027029173","https://openalex.org/W2030179996","https://openalex.org/W2048316306","https://openalex.org/W2061628168","https://openalex.org/W2096320880","https://openalex.org/W2100961570","https://openalex.org/W2129534965","https://openalex.org/W2139924999","https://openalex.org/W2151821220","https://openalex.org/W2156012604","https://openalex.org/W2156114286","https://openalex.org/W2157408013","https://openalex.org/W2161969291","https://openalex.org/W2167685945","https://openalex.org/W2168356304","https://openalex.org/W2605197334","https://openalex.org/W3163200468","https://openalex.org/W4230930919","https://openalex.org/W4292408555","https://openalex.org/W6628646791","https://openalex.org/W6629120563","https://openalex.org/W6630000159"],"related_works":["https://openalex.org/W2888673113","https://openalex.org/W2047973478","https://openalex.org/W4295532600","https://openalex.org/W2056065966","https://openalex.org/W2062641654","https://openalex.org/W2063823869","https://openalex.org/W2352602608","https://openalex.org/W2067569035","https://openalex.org/W2090985514","https://openalex.org/W3149975758"],"abstract_inverted_index":{"Although":[0],"tracing":[1],"linear":[2],"structures":[3],"in":[4,40,69],"2D":[5,97],"images":[6,101],"and":[7,102],"3D":[8,104],"image":[9],"stacks":[10],"has":[11],"received":[12],"much":[13],"attention":[14],"over":[15],"the":[16,27,76,90],"years,":[17],"full":[18],"automation":[19],"remains":[20],"elusive.":[21],"In":[22],"this":[23],"paper,":[24],"we":[25],"formulate":[26],"delineation":[28],"problem":[29],"as":[30],"one":[31],"of":[32,43,99,106],"solving":[33],"a":[34,41,53,60,70,85,96,103],"Quadratic":[35],"Mixed":[36],"Integer":[37],"Program":[38],"(Q-MIP)":[39],"graph":[42],"potential":[44],"paths,":[45,66],"which":[46,67],"can":[47],"be":[48],"done":[49],"optimally":[50],"up":[51],"to":[52,63],"very":[54],"small":[55],"tolerance.":[56],"We":[57,79],"further":[58],"propose":[59],"novel":[61],"approach":[62,83],"weighting":[64],"these":[65],"results":[68],"Q-MIP":[71],"solution":[72],"that":[73,81],"accurately":[74],"matches":[75],"ground":[77],"truth.":[78],"demonstrate":[80],"our":[82],"outperforms":[84],"state-of-the-art":[86],"technique":[87],"based":[88],"on":[89,95],"k-Minimum":[91],"Spanning":[92],"Tree":[93],"formulation":[94],"dataset":[98,105],"aerial":[100],"confocal":[107],"microscopy":[108],"stacks.":[109]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":2},{"year":2020,"cited_by_count":7},{"year":2019,"cited_by_count":5},{"year":2018,"cited_by_count":4},{"year":2017,"cited_by_count":14},{"year":2016,"cited_by_count":15},{"year":2015,"cited_by_count":12},{"year":2014,"cited_by_count":15},{"year":2013,"cited_by_count":9},{"year":2012,"cited_by_count":1}],"updated_date":"2026-04-04T16:13:02.066488","created_date":"2025-10-10T00:00:00"}