{"id":"https://openalex.org/W2126290670","doi":"https://doi.org/10.1109/cvpr.2006.48","title":"Activity Analysis in Microtubule Videos by Mixture of Hidden Markov Models","display_name":"Activity Analysis in Microtubule Videos by Mixture of Hidden Markov Models","publication_year":2006,"publication_date":"2006-07-10","ids":{"openalex":"https://openalex.org/W2126290670","doi":"https://doi.org/10.1109/cvpr.2006.48","mag":"2126290670"},"language":"en","primary_location":{"id":"doi:10.1109/cvpr.2006.48","is_oa":false,"landing_page_url":"https://doi.org/10.1109/cvpr.2006.48","pdf_url":null,"source":{"id":"https://openalex.org/S4210176548","display_name":"IEEE Computer Society Conference on Computer Vision and Pattern Recognition/Proceedings - IEEE Computer Society Conference on Computer Vision and Pattern Recognition/Proceedings","issn_l":"1063-6919","issn":["1063-6919","2332-564X","2575-7075"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","norway-1"],"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"conference"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2006 IEEE Computer Society Conference on Computer Vision and Pattern Recognition - Volume 2 (CVPR'06)","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5072805914","display_name":"Alphan Alt\u0131nok","orcid":"https://orcid.org/0000-0002-5517-0037","observed_orcids":["https://orcid.org/0000-0002-5517-0037"]},"institutions":[{"id":"https://openalex.org/I154570441","display_name":"University of California, Santa Barbara","ror":"https://ror.org/02t274463","country_code":"US","type":"education","lineage":["https://openalex.org/I154570441"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"A. Altinok","raw_affiliation_strings":["Computer Science, University of California, Santa Barbara, CA, USA","UNIVERSITY OF CALIFORNIA, SANTA BARBARA, Santa Barbara"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Computer Science, University of California, Santa Barbara, CA, USA","institution_ids":["https://openalex.org/I154570441"]},{"raw_affiliation_string":"UNIVERSITY OF CALIFORNIA, SANTA BARBARA, Santa Barbara","institution_ids":["https://openalex.org/I154570441"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5073517222","display_name":"Motaz El-Saban","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I154570441","display_name":"University of California, Santa Barbara","ror":"https://ror.org/02t274463","country_code":"US","type":"education","lineage":["https://openalex.org/I154570441"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"M. El-Saban","raw_affiliation_strings":["Electrical and Computer Engineering, University of California, Santa Barbara, CA, USA","UNIVERSITY OF CALIFORNIA, SANTA BARBARA, Santa Barbara"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Electrical and Computer Engineering, University of California, Santa Barbara, CA, USA","institution_ids":["https://openalex.org/I154570441"]},{"raw_affiliation_string":"UNIVERSITY OF CALIFORNIA, SANTA BARBARA, Santa Barbara","institution_ids":["https://openalex.org/I154570441"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5060908571","display_name":"Austin Peck","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I154570441","display_name":"University of California, Santa Barbara","ror":"https://ror.org/02t274463","country_code":"US","type":"education","lineage":["https://openalex.org/I154570441"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"A.J. Peck","raw_affiliation_strings":["Molecular, Cellular, and Developmental Biology, University of California, Santa Barbara, CA, USA","UNIVERSITY OF CALIFORNIA, SANTA BARBARA, Santa Barbara"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Molecular, Cellular, and Developmental Biology, University of California, Santa Barbara, CA, USA","institution_ids":["https://openalex.org/I154570441"]},{"raw_affiliation_string":"UNIVERSITY OF CALIFORNIA, SANTA BARBARA, Santa Barbara","institution_ids":["https://openalex.org/I154570441"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5041838834","display_name":"L Wilson","orcid":"https://orcid.org/0000-0003-1403-0799","observed_orcids":["https://orcid.org/0000-0003-1403-0799"]},"institutions":[{"id":"https://openalex.org/I154570441","display_name":"University of California, Santa Barbara","ror":"https://ror.org/02t274463","country_code":"US","type":"education","lineage":["https://openalex.org/I154570441"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"L. Wilson","raw_affiliation_strings":["Molecular, Cellular, and Developmental Biology, University of California, Santa Barbara, CA, USA","UNIVERSITY OF CALIFORNIA, SANTA BARBARA, Santa Barbara"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Molecular, Cellular, and Developmental Biology, University of California, Santa Barbara, CA, USA","institution_ids":["https://openalex.org/I154570441"]},{"raw_affiliation_string":"UNIVERSITY OF CALIFORNIA, SANTA BARBARA, Santa Barbara","institution_ids":["https://openalex.org/I154570441"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5039595355","display_name":"Stuart C. Feinstein","orcid":"https://orcid.org/0000-0002-1662-6759","observed_orcids":["https://orcid.org/0000-0002-1662-6759"]},"institutions":[{"id":"https://openalex.org/I154570441","display_name":"University of California, Santa Barbara","ror":"https://ror.org/02t274463","country_code":"US","type":"education","lineage":["https://openalex.org/I154570441"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"S.C. Feinstein","raw_affiliation_strings":["Molecular, Cellular, and Developmental Biology, University of California, Santa Barbara, CA, USA","UNIVERSITY OF CALIFORNIA, SANTA BARBARA, Santa Barbara"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Molecular, Cellular, and Developmental Biology, University of California, Santa Barbara, CA, USA","institution_ids":["https://openalex.org/I154570441"]},{"raw_affiliation_string":"UNIVERSITY OF CALIFORNIA, SANTA BARBARA, Santa Barbara","institution_ids":["https://openalex.org/I154570441"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5045964903","display_name":"B. S. Manjunath","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I154570441","display_name":"University of California, Santa Barbara","ror":"https://ror.org/02t274463","country_code":"US","type":"education","lineage":["https://openalex.org/I154570441"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"B.S. Manjunath","raw_affiliation_strings":["Electrical and Computer Engineering, University of California, Santa Barbara, CA, USA","UNIVERSITY OF CALIFORNIA, SANTA BARBARA, Santa Barbara"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Electrical and Computer Engineering, University of California, Santa Barbara, CA, USA","institution_ids":["https://openalex.org/I154570441"]},{"raw_affiliation_string":"UNIVERSITY OF CALIFORNIA, SANTA BARBARA, Santa Barbara","institution_ids":["https://openalex.org/I154570441"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5026459097","display_name":"Kenneth H. Rose","orcid":"https://orcid.org/0000-0001-9463-2647","observed_orcids":["https://orcid.org/0000-0001-9463-2647"]},"institutions":[{"id":"https://openalex.org/I154570441","display_name":"University of California, Santa Barbara","ror":"https://ror.org/02t274463","country_code":"US","type":"education","lineage":["https://openalex.org/I154570441"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"K. Rose","raw_affiliation_strings":["Electrical and Computer Engineering, University of California, Santa Barbara, CA, USA","UNIVERSITY OF CALIFORNIA, SANTA BARBARA, Santa Barbara"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Electrical and Computer Engineering, University of California, Santa Barbara, CA, USA","institution_ids":["https://openalex.org/I154570441"]},{"raw_affiliation_string":"UNIVERSITY OF CALIFORNIA, SANTA BARBARA, Santa Barbara","institution_ids":["https://openalex.org/I154570441"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I154570441"],"apc_list":null,"apc_paid":null,"fwci":12.0082,"has_fulltext":false,"cited_by_count":25,"citation_normalized_percentile":{"value":0.98725573,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":"2","issue":null,"first_page":"1662","last_page":"1669"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9779999852180481,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9779999852180481,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10492","display_name":"Microtubule and mitosis dynamics","score":0.013399999588727951,"subfield":{"id":"https://openalex.org/subfields/1307","display_name":"Cell Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10540","display_name":"Advanced Fluorescence Microscopy Techniques","score":0.0010000000474974513,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/microtubule-tracking","display_name":"microtubule tracking","score":0.9240000247955322},{"id":"https://openalex.org/keywords/microtubule-dynamics","display_name":"microtubule dynamics","score":0.9559999704360962},{"id":"https://openalex.org/keywords/hidden-markov-models","display_name":"hidden Markov models","score":0.7950000166893005},{"id":"https://openalex.org/keywords/mixture-models","display_name":"mixture models","score":0.9229999780654907},{"id":"https://openalex.org/keywords/cytoskeleton","display_name":"cytoskeleton","score":0.9340000152587891},{"id":"https://openalex.org/keywords/automated-cell-tracking","display_name":"automated cell tracking","score":0.6539999842643738},{"id":"https://openalex.org/keywords/video-analysis","display_name":"video analysis","score":0.5139999985694885},{"id":"https://openalex.org/keywords/spatial-and-temporal-patterns","display_name":"spatial and temporal patterns","score":0.6399999856948853}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7825912237167358},{"id":"https://openalex.org/C4679612","wikidata":"https://www.wikidata.org/wiki/Q866298","display_name":"Aggregate (composite)","level":2,"score":0.5442041754722595},{"id":"https://openalex.org/C98763669","wikidata":"https://www.wikidata.org/wiki/Q176645","display_name":"Markov chain","level":2,"score":0.5371236801147461},{"id":"https://openalex.org/C23224414","wikidata":"https://www.wikidata.org/wiki/Q176769","display_name":"Hidden Markov model","level":2,"score":0.4874284565448761},{"id":"https://openalex.org/C145912823","wikidata":"https://www.wikidata.org/wiki/Q113558","display_name":"Dynamics (music)","level":2,"score":0.4656579792499542},{"id":"https://openalex.org/C2775936607","wikidata":"https://www.wikidata.org/wiki/Q466845","display_name":"Tracking (education)","level":2,"score":0.4553043246269226},{"id":"https://openalex.org/C20418707","wikidata":"https://www.wikidata.org/wiki/Q189933","display_name":"Microtubule","level":2,"score":0.42522993683815},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.4120626747608185},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3501494526863098},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.248087078332901},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.07163232564926147},{"id":"https://openalex.org/C19417346","wikidata":"https://www.wikidata.org/wiki/Q7922","display_name":"Pedagogy","level":1,"score":0.0},{"id":"https://openalex.org/C159985019","wikidata":"https://www.wikidata.org/wiki/Q181790","display_name":"Composite material","level":1,"score":0.0},{"id":"https://openalex.org/C24890656","wikidata":"https://www.wikidata.org/wiki/Q82811","display_name":"Acoustics","level":1,"score":0.0},{"id":"https://openalex.org/C15744967","wikidata":"https://www.wikidata.org/wiki/Q9418","display_name":"Psychology","level":0,"score":0.0},{"id":"https://openalex.org/C95444343","wikidata":"https://www.wikidata.org/wiki/Q7141","display_name":"Cell biology","level":1,"score":0.0},{"id":"https://openalex.org/C192562407","wikidata":"https://www.wikidata.org/wiki/Q228736","display_name":"Materials science","level":0,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1109/cvpr.2006.48","is_oa":false,"landing_page_url":"https://doi.org/10.1109/cvpr.2006.48","pdf_url":null,"source":{"id":"https://openalex.org/S4210176548","display_name":"IEEE Computer Society Conference on Computer Vision and Pattern Recognition/Proceedings - IEEE Computer Society Conference on Computer Vision and Pattern Recognition/Proceedings","issn_l":"1063-6919","issn":["1063-6919","2332-564X","2575-7075"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","norway-1"],"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"conference"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2006 IEEE Computer Society Conference on Computer Vision and Pattern Recognition - Volume 2 (CVPR'06)","raw_type":"proceedings-article"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.73.7292","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.73.7292","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://vision.ece.ucsb.edu/publications/Altinok_cvpr06.pdf","raw_type":"text"}],"best_oa_location":null,"sustainable_development_goals":[],"sustainable_development_goals_aurora":[],"study_designs":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":29,"referenced_works":["https://openalex.org/W1500582373","https://openalex.org/W1541134818","https://openalex.org/W1560013842","https://openalex.org/W1585151117","https://openalex.org/W1877570817","https://openalex.org/W1989416101","https://openalex.org/W2007909950","https://openalex.org/W2018594151","https://openalex.org/W2026275287","https://openalex.org/W2041976798","https://openalex.org/W2092266133","https://openalex.org/W2097502814","https://openalex.org/W2100649932","https://openalex.org/W2101733470","https://openalex.org/W2105738688","https://openalex.org/W2107892375","https://openalex.org/W2116018917","https://openalex.org/W2130768248","https://openalex.org/W2143220837","https://openalex.org/W2146688665","https://openalex.org/W2150330984","https://openalex.org/W2159994020","https://openalex.org/W2161179221","https://openalex.org/W2615765930","https://openalex.org/W2998023265","https://openalex.org/W4241396067","https://openalex.org/W6629901015","https://openalex.org/W6654828055","https://openalex.org/W6675915270"],"related_works":["https://openalex.org/W2389529561","https://openalex.org/W2358941527","https://openalex.org/W3136955865","https://openalex.org/W3097953955","https://openalex.org/W2542256560","https://openalex.org/W3128571556","https://openalex.org/W1578117154","https://openalex.org/W1971776229","https://openalex.org/W1800033570","https://openalex.org/W2347219288"],"abstract_inverted_index":{"We":[0],"present":[1],"an":[2,131],"automated":[3,93,138],"method":[4,35],"for":[5,89],"the":[6,17,38],"tracking":[7,40],"and":[8,30,41,48,59,83,121,135,142],"dynamics":[9,78,116],"modeling":[10],"of":[11,16,27,77,110,118,140],"microtubules":[12],"-a":[13],"major":[14],"component":[15],"cytoskeleton-":[18],"which":[19],"provides":[20],"researchers":[21],"with":[22],"a":[23],"previously":[24,146],"unattainable":[25,147],"level":[26],"data":[28,53],"analysis":[29,42,139],"quantification":[31],"capabilities.":[32],"The":[33],"proposed":[34,96],"improves":[36],"upon":[37],"manual":[39],"techniques":[43],"by":[44,108],"i)":[45],"increasing":[46],"accuracy":[47],"quantified":[49],"sample":[50],"size":[51],"in":[52],"collection,":[54],"ii)":[55],"eliminating":[56],"user":[57],"bias":[58],"standardizing":[60],"analysis,":[61],"iii)":[62],"making":[63],"available":[64],"new":[65],"features":[66],"that":[67],"are":[68],"impractical":[69],"to":[70,97,114,149],"capture":[71],"manually,":[72],"iv)":[73],"enabling":[74],"statistical":[75],"extraction":[76],"patterns":[79,117,144],"from":[80],"cellular":[81,120,150],"processes,":[82],"v)":[84],"greatly":[85],"reducing":[86],"required":[87],"time":[88],"entire":[90],"studies.":[91],"An":[92],"procedure":[94],"is":[95,105],"track":[98],"each":[99],"resolvable":[100],"microtubule,":[101],"whose":[102],"aggregate":[103],"activity":[104],"then":[106],"modeled":[107],"mixtures":[109],"Hidden":[111],"Markov":[112],"Models":[113],"uncover":[115],"underlying":[119],"experimental":[122],"conditions.":[123],"Our":[124],"results":[125],"support":[126],"manually":[127],"established":[128],"findings":[129],"on":[130],"actual":[132],"microtubule":[133],"dataset":[134],"illustrate":[136],"how":[137],"spatial":[141],"temporal":[143],"offers":[145],"insights":[148],"processes.":[151]},"counts_by_year":[{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":1},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":3},{"year":2014,"cited_by_count":1},{"year":2013,"cited_by_count":1},{"year":2012,"cited_by_count":2}],"updated_date":"2026-10-06T10:28:23.643775","created_date":"2025-10-10T00:00:00"}