{"id":"https://openalex.org/W4248562598","doi":"https://doi.org/10.1109/csb.2004.1332508","title":"Computational methods for predicting intramolecular g-quadruplexes in nucleotide sequences","display_name":"Computational methods for predicting intramolecular g-quadruplexes in nucleotide sequences","publication_year":2004,"publication_date":"2004-11-08","ids":{"openalex":"https://openalex.org/W4248562598","doi":"https://doi.org/10.1109/csb.2004.1332508"},"language":"en","primary_location":{"id":"doi:10.1109/csb.2004.1332508","is_oa":false,"landing_page_url":"https://doi.org/10.1109/csb.2004.1332508","pdf_url":null,"source":{"id":"https://openalex.org/S4363608884","display_name":"Proceedings. 2004 IEEE Computational Systems Bioinformatics Conference, 2004. CSB 2004.","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"conference"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings. 2004 IEEE Computational Systems Bioinformatics Conference, 2004. CSB 2004.","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5054401307","display_name":"Lawrence D\u2019Antonio","orcid":"https://orcid.org/0009-0007-2032-5004"},"institutions":[{"id":"https://openalex.org/I171851574","display_name":"Ramapo College","ror":"https://ror.org/03s2x9d90","country_code":"US","type":"education","lineage":["https://openalex.org/I171851574"]},{"id":"https://openalex.org/I64281891","display_name":"College of New Jersey","ror":"https://ror.org/02nx5r318","country_code":"US","type":"education","lineage":["https://openalex.org/I64281891"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"L. D'Antonio","raw_affiliation_strings":["Computer Science Department, Ramapo College of New Jersey"],"affiliations":[{"raw_affiliation_string":"Computer Science Department, Ramapo College of New Jersey","institution_ids":["https://openalex.org/I171851574","https://openalex.org/I64281891"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5112780624","display_name":"Paramjeet S. Bagga","orcid":null},"institutions":[{"id":"https://openalex.org/I171851574","display_name":"Ramapo College","ror":"https://ror.org/03s2x9d90","country_code":"US","type":"education","lineage":["https://openalex.org/I171851574"]},{"id":"https://openalex.org/I20089843","display_name":"Princeton University","ror":"https://ror.org/00hx57361","country_code":"US","type":"education","lineage":["https://openalex.org/I20089843"]},{"id":"https://openalex.org/I64281891","display_name":"College of New Jersey","ror":"https://ror.org/02nx5r318","country_code":"US","type":"education","lineage":["https://openalex.org/I64281891"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"P. Bagga","raw_affiliation_strings":["Bioinformatics Department, Ramapo College of New Jersey"],"affiliations":[{"raw_affiliation_string":"Bioinformatics Department, Ramapo College of New Jersey","institution_ids":["https://openalex.org/I171851574","https://openalex.org/I64281891","https://openalex.org/I20089843"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5054401307"],"corresponding_institution_ids":["https://openalex.org/I171851574","https://openalex.org/I64281891"],"apc_list":null,"apc_paid":null,"fwci":1.78867925,"has_fulltext":false,"cited_by_count":10,"citation_normalized_percentile":{"value":0.86788155,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":"21","issue":null,"first_page":"561","last_page":"562"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10432","display_name":"DNA and Nucleic Acid Chemistry","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10432","display_name":"DNA and Nucleic Acid Chemistry","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10207","display_name":"Advanced biosensing and bioanalysis techniques","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/g-quadruplex","display_name":"G-quadruplex","score":0.7479307055473328},{"id":"https://openalex.org/keywords/suite","display_name":"Suite","score":0.6957223415374756},{"id":"https://openalex.org/keywords/intramolecular-force","display_name":"Intramolecular force","score":0.5993081331253052},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5930362939834595},{"id":"https://openalex.org/keywords/guanine","display_name":"Guanine","score":0.530154287815094},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.4698929786682129},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4605938196182251},{"id":"https://openalex.org/keywords/motif","display_name":"Motif (music)","score":0.45495644211769104},{"id":"https://openalex.org/keywords/rna","display_name":"RNA","score":0.42276597023010254},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3768656253814697},{"id":"https://openalex.org/keywords/nucleotide","display_name":"Nucleotide","score":0.31464624404907227},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.25675737857818604},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.19590216875076294},{"id":"https://openalex.org/keywords/dna","display_name":"DNA","score":0.15448269248008728},{"id":"https://openalex.org/keywords/stereochemistry","display_name":"Stereochemistry","score":0.10426121950149536},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.0801180899143219}],"concepts":[{"id":"https://openalex.org/C83762044","wikidata":"https://www.wikidata.org/wiki/Q411641","display_name":"G-quadruplex","level":3,"score":0.7479307055473328},{"id":"https://openalex.org/C79581498","wikidata":"https://www.wikidata.org/wiki/Q1367530","display_name":"Suite","level":2,"score":0.6957223415374756},{"id":"https://openalex.org/C75079739","wikidata":"https://www.wikidata.org/wiki/Q1571801","display_name":"Intramolecular force","level":2,"score":0.5993081331253052},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5930362939834595},{"id":"https://openalex.org/C2778301229","wikidata":"https://www.wikidata.org/wiki/Q169313","display_name":"Guanine","level":4,"score":0.530154287815094},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.4698929786682129},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4605938196182251},{"id":"https://openalex.org/C32276052","wikidata":"https://www.wikidata.org/wiki/Q908349","display_name":"Motif (music)","level":2,"score":0.45495644211769104},{"id":"https://openalex.org/C67705224","wikidata":"https://www.wikidata.org/wiki/Q11053","display_name":"RNA","level":3,"score":0.42276597023010254},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3768656253814697},{"id":"https://openalex.org/C512185932","wikidata":"https://www.wikidata.org/wiki/Q28745","display_name":"Nucleotide","level":3,"score":0.31464624404907227},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.25675737857818604},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.19590216875076294},{"id":"https://openalex.org/C552990157","wikidata":"https://www.wikidata.org/wiki/Q7430","display_name":"DNA","level":2,"score":0.15448269248008728},{"id":"https://openalex.org/C71240020","wikidata":"https://www.wikidata.org/wiki/Q186011","display_name":"Stereochemistry","level":1,"score":0.10426121950149536},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0801180899143219},{"id":"https://openalex.org/C95457728","wikidata":"https://www.wikidata.org/wiki/Q309","display_name":"History","level":0,"score":0.0},{"id":"https://openalex.org/C166957645","wikidata":"https://www.wikidata.org/wiki/Q23498","display_name":"Archaeology","level":1,"score":0.0},{"id":"https://openalex.org/C24890656","wikidata":"https://www.wikidata.org/wiki/Q82811","display_name":"Acoustics","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/csb.2004.1332508","is_oa":false,"landing_page_url":"https://doi.org/10.1109/csb.2004.1332508","pdf_url":null,"source":{"id":"https://openalex.org/S4363608884","display_name":"Proceedings. 2004 IEEE Computational Systems Bioinformatics Conference, 2004. CSB 2004.","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"conference"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings. 2004 IEEE Computational Systems Bioinformatics Conference, 2004. CSB 2004.","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":6,"referenced_works":["https://openalex.org/W2015625843","https://openalex.org/W2058737848","https://openalex.org/W2136471718","https://openalex.org/W2149242389","https://openalex.org/W2164876360","https://openalex.org/W2912570624"],"related_works":["https://openalex.org/W2884169462","https://openalex.org/W2029041988","https://openalex.org/W4253853436","https://openalex.org/W3094279133","https://openalex.org/W2471444529","https://openalex.org/W2089598395","https://openalex.org/W2048123394","https://openalex.org/W2043187001","https://openalex.org/W2058886065","https://openalex.org/W1534696224"],"abstract_inverted_index":{"Guanine-rich":[0],"sequences,":[1],"including":[2],"those":[3],"that":[4],"form":[5],"G-quadruplexes,":[6],"are":[7],"abundant":[8],"in":[9],"regions":[10],"of":[11,29,41],"biological":[12],"significance.":[13],"In":[14],"order":[15],"to":[16,36],"map":[17],"putative":[18],"G-quadruplex":[19,43],"elements":[20],"within":[21],"mammalian":[22],"genes":[23,38],"we":[24],"have":[25],"created":[26],"a":[27],"suite":[28,33],"computational":[30],"tools.":[31],"This":[32],"contains":[34],"algorithms":[35],"search":[37],"for":[39],"occurrences":[40],"the":[42],"motif":[44],"and":[45],"determine":[46],"their":[47],"distribution":[48],"near":[49],"RNA":[50],"processing":[51],"sites.":[52]},"counts_by_year":[{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":2}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
