{"id":"https://openalex.org/W2054357508","doi":"https://doi.org/10.1109/coginfocom.2013.6719283","title":"Extending the visualization capabilities of a genome browser","display_name":"Extending the visualization capabilities of a genome browser","publication_year":2013,"publication_date":"2013-12-01","ids":{"openalex":"https://openalex.org/W2054357508","doi":"https://doi.org/10.1109/coginfocom.2013.6719283","mag":"2054357508"},"language":"en","primary_location":{"id":"doi:10.1109/coginfocom.2013.6719283","is_oa":false,"landing_page_url":"https://doi.org/10.1109/coginfocom.2013.6719283","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2013 IEEE 4th International Conference on Cognitive Infocommunications (CogInfoCom)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5012785595","display_name":"Csaba Lamfalusi","orcid":null},"institutions":[{"id":"https://openalex.org/I132735039","display_name":"University of Debrecen","ror":"https://ror.org/02xf66n48","country_code":"HU","type":"education","lineage":["https://openalex.org/I132735039"]}],"countries":["HU"],"is_corresponding":true,"raw_author_name":"Csaba Lamfalusi","raw_affiliation_strings":["Faculty of Informatics, University of Debrecen, Debrecen, Hungary","Fac. of Inf., Univ. of Debrecen, Debrecen, Hungary"],"affiliations":[{"raw_affiliation_string":"Faculty of Informatics, University of Debrecen, Debrecen, Hungary","institution_ids":["https://openalex.org/I132735039"]},{"raw_affiliation_string":"Fac. of Inf., Univ. of Debrecen, Debrecen, Hungary","institution_ids":["https://openalex.org/I132735039"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070747708","display_name":"David Girus","orcid":null},"institutions":[{"id":"https://openalex.org/I132735039","display_name":"University of Debrecen","ror":"https://ror.org/02xf66n48","country_code":"HU","type":"education","lineage":["https://openalex.org/I132735039"]}],"countries":["HU"],"is_corresponding":false,"raw_author_name":"David Girus","raw_affiliation_strings":["Faculty of Informatics, University of Debrecen, Debrecen, Hungary","Fac. of Inf., Univ. of Debrecen, Debrecen, Hungary"],"affiliations":[{"raw_affiliation_string":"Faculty of Informatics, University of Debrecen, Debrecen, Hungary","institution_ids":["https://openalex.org/I132735039"]},{"raw_affiliation_string":"Fac. of Inf., Univ. of Debrecen, Debrecen, Hungary","institution_ids":["https://openalex.org/I132735039"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005558038","display_name":"Kinga Kruppa","orcid":"https://orcid.org/0000-0001-5359-2829"},"institutions":[{"id":"https://openalex.org/I132735039","display_name":"University of Debrecen","ror":"https://ror.org/02xf66n48","country_code":"HU","type":"education","lineage":["https://openalex.org/I132735039"]}],"countries":["HU"],"is_corresponding":false,"raw_author_name":"Kinga Kruppa","raw_affiliation_strings":["Faculty of Informatics, University of Debrecen, Debrecen, Hungary","Fac. of Inf., Univ. of Debrecen, Debrecen, Hungary"],"affiliations":[{"raw_affiliation_string":"Faculty of Informatics, University of Debrecen, Debrecen, Hungary","institution_ids":["https://openalex.org/I132735039"]},{"raw_affiliation_string":"Fac. of Inf., Univ. of Debrecen, Debrecen, Hungary","institution_ids":["https://openalex.org/I132735039"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101442112","display_name":"J\u00e1nos T\u00f3th","orcid":"https://orcid.org/0000-0003-1958-5144"},"institutions":[{"id":"https://openalex.org/I132735039","display_name":"University of Debrecen","ror":"https://ror.org/02xf66n48","country_code":"HU","type":"education","lineage":["https://openalex.org/I132735039"]}],"countries":["HU"],"is_corresponding":false,"raw_author_name":"Janos Toth","raw_affiliation_strings":["Faculty of Informatics, University of Debrecen, Debrecen, Hungary","Fac. of Inf., Univ. of Debrecen, Debrecen, Hungary"],"affiliations":[{"raw_affiliation_string":"Faculty of Informatics, University of Debrecen, Debrecen, Hungary","institution_ids":["https://openalex.org/I132735039"]},{"raw_affiliation_string":"Fac. of Inf., Univ. of Debrecen, Debrecen, Hungary","institution_ids":["https://openalex.org/I132735039"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051062797","display_name":"Eniko Hajdune Pocsai","orcid":null},"institutions":[{"id":"https://openalex.org/I132735039","display_name":"University of Debrecen","ror":"https://ror.org/02xf66n48","country_code":"HU","type":"education","lineage":["https://openalex.org/I132735039"]}],"countries":["HU"],"is_corresponding":false,"raw_author_name":"Eniko Hajdune Pocsai","raw_affiliation_strings":["Faculty of Informatics, University of Debrecen, Debrecen, Hungary","Fac. of Inf., Univ. of Debrecen, Debrecen, Hungary"],"affiliations":[{"raw_affiliation_string":"Faculty of Informatics, University of Debrecen, Debrecen, Hungary","institution_ids":["https://openalex.org/I132735039"]},{"raw_affiliation_string":"Fac. of Inf., Univ. of Debrecen, Debrecen, Hungary","institution_ids":["https://openalex.org/I132735039"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5073016646","display_name":"Roland Kunkli","orcid":"https://orcid.org/0000-0003-3947-6586"},"institutions":[{"id":"https://openalex.org/I132735039","display_name":"University of Debrecen","ror":"https://ror.org/02xf66n48","country_code":"HU","type":"education","lineage":["https://openalex.org/I132735039"]}],"countries":["HU"],"is_corresponding":false,"raw_author_name":"Roland Kunkli","raw_affiliation_strings":["Faculty of Informatics, University of Debrecen, Debrecen, Hungary","Fac. of Inf., Univ. of Debrecen, Debrecen, Hungary"],"affiliations":[{"raw_affiliation_string":"Faculty of Informatics, University of Debrecen, Debrecen, Hungary","institution_ids":["https://openalex.org/I132735039"]},{"raw_affiliation_string":"Fac. of Inf., Univ. of Debrecen, Debrecen, Hungary","institution_ids":["https://openalex.org/I132735039"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5061104387","display_name":"Andr\u00e1s Hajd\u00fa","orcid":"https://orcid.org/0000-0003-1718-9770"},"institutions":[{"id":"https://openalex.org/I132735039","display_name":"University of Debrecen","ror":"https://ror.org/02xf66n48","country_code":"HU","type":"education","lineage":["https://openalex.org/I132735039"]}],"countries":["HU"],"is_corresponding":false,"raw_author_name":"Andras Hajdu","raw_affiliation_strings":["Faculty of Informatics, University of Debrecen, Debrecen, Hungary","Fac. of Inf., Univ. of Debrecen, Debrecen, Hungary"],"affiliations":[{"raw_affiliation_string":"Faculty of Informatics, University of Debrecen, Debrecen, Hungary","institution_ids":["https://openalex.org/I132735039"]},{"raw_affiliation_string":"Fac. of Inf., Univ. of Debrecen, Debrecen, Hungary","institution_ids":["https://openalex.org/I132735039"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5055640941","display_name":"B\u00e1lint L. B\u00e1lint","orcid":"https://orcid.org/0000-0002-6163-7190"},"institutions":[{"id":"https://openalex.org/I132735039","display_name":"University of Debrecen","ror":"https://ror.org/02xf66n48","country_code":"HU","type":"education","lineage":["https://openalex.org/I132735039"]}],"countries":["HU"],"is_corresponding":false,"raw_author_name":"Balint L. Balint","raw_affiliation_strings":["Department of Biochemistry and Molecular Biology Medical and Health Science Center, University of Debrecen, Debrecen, Hungary","Dept. of Biochem. & Mol. Biol., Univ. of Debrecen, Debrecen, Hungary"],"affiliations":[{"raw_affiliation_string":"Department of Biochemistry and Molecular Biology Medical and Health Science Center, University of Debrecen, Debrecen, Hungary","institution_ids":["https://openalex.org/I132735039"]},{"raw_affiliation_string":"Dept. of Biochem. & Mol. Biol., Univ. of Debrecen, Debrecen, Hungary","institution_ids":["https://openalex.org/I132735039"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":8,"corresponding_author_ids":["https://openalex.org/A5012785595"],"corresponding_institution_ids":["https://openalex.org/I132735039"],"apc_list":null,"apc_paid":null,"fwci":0.1462,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.55953477,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":"1","issue":null,"first_page":"419","last_page":"422"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9958000183105469,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9958000183105469,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9950000047683716,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9941999912261963,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.8384326696395874},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7748202085494995},{"id":"https://openalex.org/keywords/genome-browser","display_name":"Genome browser","score":0.6510535478591919},{"id":"https://openalex.org/keywords/scalability","display_name":"Scalability","score":0.6417543888092041},{"id":"https://openalex.org/keywords/data-visualization","display_name":"Data visualization","score":0.5031291842460632},{"id":"https://openalex.org/keywords/human\u2013computer-interaction","display_name":"Human\u2013computer interaction","score":0.46579039096832275},{"id":"https://openalex.org/keywords/creative-visualization","display_name":"Creative visualization","score":0.4608241319656372},{"id":"https://openalex.org/keywords/graphical-user-interface","display_name":"Graphical user interface","score":0.4360084533691406},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.41673916578292847},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.38255470991134644},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.3602410852909088},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.340992271900177},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3048979938030243},{"id":"https://openalex.org/keywords/genomics","display_name":"Genomics","score":0.1911943256855011},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.13620609045028687},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.11664837598800659},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.10957574844360352},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.09894305467605591}],"concepts":[{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.8384326696395874},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7748202085494995},{"id":"https://openalex.org/C2781148417","wikidata":"https://www.wikidata.org/wiki/Q5533486","display_name":"Genome browser","level":5,"score":0.6510535478591919},{"id":"https://openalex.org/C48044578","wikidata":"https://www.wikidata.org/wiki/Q727490","display_name":"Scalability","level":2,"score":0.6417543888092041},{"id":"https://openalex.org/C172367668","wikidata":"https://www.wikidata.org/wiki/Q6504956","display_name":"Data visualization","level":3,"score":0.5031291842460632},{"id":"https://openalex.org/C107457646","wikidata":"https://www.wikidata.org/wiki/Q207434","display_name":"Human\u2013computer interaction","level":1,"score":0.46579039096832275},{"id":"https://openalex.org/C14669888","wikidata":"https://www.wikidata.org/wiki/Q4014850","display_name":"Creative visualization","level":3,"score":0.4608241319656372},{"id":"https://openalex.org/C37789001","wikidata":"https://www.wikidata.org/wiki/Q782543","display_name":"Graphical user interface","level":2,"score":0.4360084533691406},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.41673916578292847},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.38255470991134644},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.3602410852909088},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.340992271900177},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3048979938030243},{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.1911943256855011},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.13620609045028687},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.11664837598800659},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.10957574844360352},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.09894305467605591},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1109/coginfocom.2013.6719283","is_oa":false,"landing_page_url":"https://doi.org/10.1109/coginfocom.2013.6719283","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2013 IEEE 4th International Conference on Cognitive Infocommunications (CogInfoCom)","raw_type":"proceedings-article"},{"id":"pmh:oai:dea.lib.unideb.hu:2437/194513","is_oa":false,"landing_page_url":"http://hdl.handle.net/2437/194513","pdf_url":null,"source":{"id":"https://openalex.org/S4306402089","display_name":"University of Debrecen Electronic Archive (University of Debrecen)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I132735039","host_organization_name":"University of Debrecen","host_organization_lineage":["https://openalex.org/I132735039"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"el\u0151ad\u00e1skivonat"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":5,"referenced_works":["https://openalex.org/W643775974","https://openalex.org/W1969691479","https://openalex.org/W1990095531","https://openalex.org/W2102771000","https://openalex.org/W2769954494"],"related_works":["https://openalex.org/W2791266083","https://openalex.org/W2066122355","https://openalex.org/W2888682129","https://openalex.org/W1608544587","https://openalex.org/W2168321020","https://openalex.org/W2105200106","https://openalex.org/W2129488645","https://openalex.org/W2816876164","https://openalex.org/W2163058551","https://openalex.org/W4236693374"],"abstract_inverted_index":{"Scalable":[0],"visualization":[1,76,99,142],"of":[2,50,90,103,115,126,149],"big":[3],"data":[4,152],"is":[5,14,54],"highly":[6],"desired":[7],"in":[8,36,44,64,83,147],"several":[9],"fields.":[10],"A":[11],"demonstrative":[12],"example":[13],"annotated":[15,118],"genetic":[16],"data,":[17],"where":[18],"the":[19,37,45,104,108,116,124,140,145],"DNA":[20,119],"sequence":[21],"can":[22,121],"be":[23],"better":[24],"visualized":[25],"using":[26],"space-filling":[27],"fractal":[28],"curves.":[29],"Though":[30],"such":[31],"approaches":[32],"are":[33,40],"already":[34],"available":[35],"literature,":[38],"they":[39],"not":[41],"applied":[42],"routinely":[43],"clinical":[46,109],"practice.":[47],"The":[48,101],"reason":[49],"this":[51,81,84],"undesired":[52],"fact":[53],"that":[55],"clinicians":[56],"use":[57],"well-established,":[58],"but":[59],"rather":[60],"old":[61],"gene":[62],"browsers":[63,69],"their":[65],"work.":[66],"Naturally,":[67],"these":[68],"lack":[70],"state-of-the-art":[71],"programming":[72],"support":[73],"and":[74,154],"also":[75],"features.":[77],"To":[78],"help":[79],"with":[80,97],"problem,":[82],"paper,":[85],"we":[86],"propose":[87],"a":[88,91,112,155],"completion":[89],"very":[92],"widely":[93],"used":[94],"genome":[95],"browser":[96,146],"scalable":[98,156],"techniques.":[100],"motivation":[102],"work":[105],"came":[106],"from":[107],"partner,":[110],"since":[111],"good":[113],"overview":[114],"whole":[117],"segment":[120],"lead":[122],"to":[123,138,144],"recognition":[125],"currently":[127],"unknown":[128],"relations":[129],"between":[130],"genes.":[131],"We":[132],"explain":[133],"what":[134],"steps":[135],"were":[136],"needed":[137],"add":[139],"new":[141],"feature":[143],"terms":[148],"graphical":[150],"elements,":[151],"extraction,":[153],"user":[157],"interface.":[158]},"counts_by_year":[{"year":2016,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
