{"id":"https://openalex.org/W1983297363","doi":"https://doi.org/10.1109/coginf.2010.5599703","title":"Predicting RNA secondary structure with Tabu Search","display_name":"Predicting RNA secondary structure with Tabu Search","publication_year":2010,"publication_date":"2010-07-01","ids":{"openalex":"https://openalex.org/W1983297363","doi":"https://doi.org/10.1109/coginf.2010.5599703","mag":"1983297363"},"language":"en","primary_location":{"id":"doi:10.1109/coginf.2010.5599703","is_oa":false,"landing_page_url":"https://doi.org/10.1109/coginf.2010.5599703","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"9th IEEE International Conference on Cognitive Informatics (ICCI'10)","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5009444945","display_name":"Yongguo Liu","orcid":"https://orcid.org/0000-0002-4906-7025"},"institutions":[{"id":"https://openalex.org/I150229711","display_name":"University of Electronic Science and Technology of China","ror":"https://ror.org/04qr3zq92","country_code":"CN","type":"education","lineage":["https://openalex.org/I150229711"]},{"id":"https://openalex.org/I4610292","display_name":"Xiangtan University","ror":"https://ror.org/00xsfaz62","country_code":"CN","type":"education","lineage":["https://openalex.org/I4610292"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yongguo Liu","raw_affiliation_strings":["Key Laboratory of Intelligent Computing & Information Processing of Ministry of Education, Xiangtan University, Xiangtan, China","School of Computer Science and Engineering, University of Electronic Science and Technology, Chengdu, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Key Laboratory of Intelligent Computing & Information Processing of Ministry of Education, Xiangtan University, Xiangtan, China","institution_ids":["https://openalex.org/I4610292"]},{"raw_affiliation_string":"School of Computer Science and Engineering, University of Electronic Science and Technology, Chengdu, China","institution_ids":["https://openalex.org/I150229711"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5055588565","display_name":"Jianrui Hao -","orcid":null},"institutions":[{"id":"https://openalex.org/I150229711","display_name":"University of Electronic Science and Technology of China","ror":"https://ror.org/04qr3zq92","country_code":"CN","type":"education","lineage":["https://openalex.org/I150229711"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jianrui Hao","raw_affiliation_strings":["School of Computer Science and Engineering, University of Electronic Science and Technology, Chengdu, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Science and Engineering, University of Electronic Science and Technology, Chengdu, China","institution_ids":["https://openalex.org/I150229711"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5081340968","display_name":"Jun Peng","orcid":"https://orcid.org/0000-0001-6800-0064"},"institutions":[{"id":"https://openalex.org/I168337820","display_name":"Chongqing University of Science and Technology","ror":"https://ror.org/03n3v6d52","country_code":"CN","type":"education","lineage":["https://openalex.org/I168337820"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jun Peng","raw_affiliation_strings":["College of Electronic Information Engineering, Chongqing University of Science and Technology, Chongqing, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Electronic Information Engineering, Chongqing University of Science and Technology, Chongqing, China","institution_ids":["https://openalex.org/I168337820"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.9236,"has_fulltext":false,"cited_by_count":5,"citation_normalized_percentile":{"value":0.74465593,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":"154","issue":null,"first_page":"409","last_page":"414"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9876999855041504,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10604","display_name":"RNA Research and Splicing","score":0.9829999804496765,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/tabu-search","display_name":"Tabu search","score":0.894410252571106},{"id":"https://openalex.org/keywords/guided-local-search","display_name":"Guided Local Search","score":0.5792579054832458},{"id":"https://openalex.org/keywords/exploit","display_name":"Exploit","score":0.576729416847229},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5474456548690796},{"id":"https://openalex.org/keywords/protein-secondary-structure","display_name":"Protein secondary structure","score":0.5050652623176575},{"id":"https://openalex.org/keywords/nucleic-acid-secondary-structure","display_name":"Nucleic acid secondary structure","score":0.5024242401123047},{"id":"https://openalex.org/keywords/space","display_name":"Space (punctuation)","score":0.4921252131462097},{"id":"https://openalex.org/keywords/rna","display_name":"RNA","score":0.48670104146003723},{"id":"https://openalex.org/keywords/diversification","display_name":"Diversification (marketing strategy)","score":0.45600593090057373},{"id":"https://openalex.org/keywords/search-algorithm","display_name":"Search algorithm","score":0.4328063130378723},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.3487415313720703},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.10223349928855896},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.08699297904968262}],"concepts":[{"id":"https://openalex.org/C123370116","wikidata":"https://www.wikidata.org/wiki/Q1424540","display_name":"Tabu search","level":2,"score":0.894410252571106},{"id":"https://openalex.org/C90189156","wikidata":"https://www.wikidata.org/wiki/Q5615481","display_name":"Guided Local Search","level":3,"score":0.5792579054832458},{"id":"https://openalex.org/C165696696","wikidata":"https://www.wikidata.org/wiki/Q11287","display_name":"Exploit","level":2,"score":0.576729416847229},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5474456548690796},{"id":"https://openalex.org/C62614982","wikidata":"https://www.wikidata.org/wiki/Q904984","display_name":"Protein secondary structure","level":2,"score":0.5050652623176575},{"id":"https://openalex.org/C85468374","wikidata":"https://www.wikidata.org/wiki/Q6589957","display_name":"Nucleic acid secondary structure","level":4,"score":0.5024242401123047},{"id":"https://openalex.org/C2778572836","wikidata":"https://www.wikidata.org/wiki/Q380933","display_name":"Space (punctuation)","level":2,"score":0.4921252131462097},{"id":"https://openalex.org/C67705224","wikidata":"https://www.wikidata.org/wiki/Q11053","display_name":"RNA","level":3,"score":0.48670104146003723},{"id":"https://openalex.org/C180916674","wikidata":"https://www.wikidata.org/wiki/Q3711935","display_name":"Diversification (marketing strategy)","level":2,"score":0.45600593090057373},{"id":"https://openalex.org/C125583679","wikidata":"https://www.wikidata.org/wiki/Q755673","display_name":"Search algorithm","level":2,"score":0.4328063130378723},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.3487415313720703},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.10223349928855896},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.08699297904968262},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C162853370","wikidata":"https://www.wikidata.org/wiki/Q39809","display_name":"Marketing","level":1,"score":0.0},{"id":"https://openalex.org/C38652104","wikidata":"https://www.wikidata.org/wiki/Q3510521","display_name":"Computer security","level":1,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C144133560","wikidata":"https://www.wikidata.org/wiki/Q4830453","display_name":"Business","level":0,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/coginf.2010.5599703","is_oa":false,"landing_page_url":"https://doi.org/10.1109/coginf.2010.5599703","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"9th IEEE International Conference on Cognitive Informatics (ICCI'10)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":16,"referenced_works":["https://openalex.org/W1541914161","https://openalex.org/W1877068375","https://openalex.org/W1975975525","https://openalex.org/W1979988863","https://openalex.org/W1988884185","https://openalex.org/W2001914834","https://openalex.org/W2007799540","https://openalex.org/W2025763720","https://openalex.org/W2028162268","https://openalex.org/W2036643266","https://openalex.org/W2077997858","https://openalex.org/W2102934142","https://openalex.org/W2103138948","https://openalex.org/W4234667141","https://openalex.org/W4241089154","https://openalex.org/W6632371923"],"related_works":["https://openalex.org/W1987877777","https://openalex.org/W2370323645","https://openalex.org/W4247343174","https://openalex.org/W2168643831","https://openalex.org/W2494989913","https://openalex.org/W2146653473","https://openalex.org/W3022707108","https://openalex.org/W2181360821","https://openalex.org/W2378762226","https://openalex.org/W1232705"],"abstract_inverted_index":{"In":[0,23],"this":[1],"paper,":[2],"a":[3],"novel":[4],"method":[5,63],"for":[6,54],"predicting":[7],"RNA":[8,12,56],"secondary":[9,13],"structure":[10,14],"called":[11],"prediction":[15],"based":[16],"on":[17],"Tabu":[18],"Search":[19],"(RNATS)":[20],"is":[21,64],"proposed.":[22],"RNATS,":[24],"two":[25],"search":[26,29],"models,":[27],"intensification":[28],"and":[30,44,66],"diversification":[31],"search,":[32],"are":[33,52],"designed":[34],"to":[35,58],"exploit":[36],"the":[37,41,46,61],"local":[38],"regions":[39],"around":[40],"current":[42],"solution":[43],"explore":[45],"unvisited":[47],"space,":[48],"respectively.":[49],"Simulation":[50],"experiments":[51],"conducted":[53],"six":[55],"sequences":[57],"show":[59],"that":[60],"proposed":[62],"feasible":[65],"effective.":[67]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2020,"cited_by_count":1},{"year":2015,"cited_by_count":2},{"year":2013,"cited_by_count":1}],"updated_date":"2026-07-29T14:22:42.915294","created_date":"2025-10-10T00:00:00"}
