{"id":"https://openalex.org/W4403211495","doi":"https://doi.org/10.1109/cibcb58642.2024.10702168","title":"An Approach for Modeling and Analysis of Insulin Biosynthesis using Petri Nets","display_name":"An Approach for Modeling and Analysis of Insulin Biosynthesis using Petri Nets","publication_year":2024,"publication_date":"2024-08-27","ids":{"openalex":"https://openalex.org/W4403211495","doi":"https://doi.org/10.1109/cibcb58642.2024.10702168"},"language":"en","primary_location":{"id":"doi:10.1109/cibcb58642.2024.10702168","is_oa":false,"landing_page_url":"https://doi.org/10.1109/cibcb58642.2024.10702168","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2024 IEEE Conference on Computational Intelligence in Bioinformatics and Computational Biology (CIBCB)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5092820895","display_name":"Maria Leandra Guateque","orcid":"https://orcid.org/0000-0001-6649-9738"},"institutions":[{"id":"https://openalex.org/I2699952","display_name":"Pontifical Catholic University of Rio de Janeiro","ror":"https://ror.org/01dg47b60","country_code":"BR","type":"education","lineage":["https://openalex.org/I2699952"]}],"countries":["BR"],"is_corresponding":true,"raw_author_name":"Maria Leandra Guateque","raw_affiliation_strings":["PUC-Rio,Departamento de Informatica,Rio de Janeiro,Brazil"],"affiliations":[{"raw_affiliation_string":"PUC-Rio,Departamento de Informatica,Rio de Janeiro,Brazil","institution_ids":["https://openalex.org/I2699952"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103073124","display_name":"Ant\u00f4nio Bas\u00edlio de Miranda","orcid":"https://orcid.org/0000-0002-4977-7350"},"institutions":[{"id":"https://openalex.org/I52325","display_name":"Funda\u00e7\u00e3o Oswaldo Cruz","ror":"https://ror.org/04jhswv08","country_code":"BR","type":"facility","lineage":["https://openalex.org/I52325"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Antonio Basilio de Miranda","raw_affiliation_strings":["FIOCRUZ,Instituto Oswaldo Cruz,Rio de Janeiro,Brazil"],"affiliations":[{"raw_affiliation_string":"FIOCRUZ,Instituto Oswaldo Cruz,Rio de Janeiro,Brazil","institution_ids":["https://openalex.org/I52325"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5037254032","display_name":"Marcos Catanho","orcid":"https://orcid.org/0000-0002-9184-4158"},"institutions":[{"id":"https://openalex.org/I52325","display_name":"Funda\u00e7\u00e3o Oswaldo Cruz","ror":"https://ror.org/04jhswv08","country_code":"BR","type":"facility","lineage":["https://openalex.org/I52325"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Marcos Catanho","raw_affiliation_strings":["FIOCRUZ,Instituto Oswaldo Cruz,Rio de Janeiro,Brazil"],"affiliations":[{"raw_affiliation_string":"FIOCRUZ,Instituto Oswaldo Cruz,Rio de Janeiro,Brazil","institution_ids":["https://openalex.org/I52325"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5091129860","display_name":"Edward Hermann H\u00e6usler","orcid":"https://orcid.org/0000-0002-4999-7476"},"institutions":[{"id":"https://openalex.org/I2699952","display_name":"Pontifical Catholic University of Rio de Janeiro","ror":"https://ror.org/01dg47b60","country_code":"BR","type":"education","lineage":["https://openalex.org/I2699952"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Edward H. Haeusler","raw_affiliation_strings":["PUC-Rio,Departamento de Informatica,Rio de Janeiro,Brazil"],"affiliations":[{"raw_affiliation_string":"PUC-Rio,Departamento de Informatica,Rio de Janeiro,Brazil","institution_ids":["https://openalex.org/I2699952"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5085416987","display_name":"S\u00e9rgio Lifschitz","orcid":"https://orcid.org/0000-0003-3073-3734"},"institutions":[{"id":"https://openalex.org/I2699952","display_name":"Pontifical Catholic University of Rio de Janeiro","ror":"https://ror.org/01dg47b60","country_code":"BR","type":"education","lineage":["https://openalex.org/I2699952"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"S\u00e9rgio Lifschitz","raw_affiliation_strings":["PUC-Rio,Departamento de Informatica,Rio de Janeiro,Brazil"],"affiliations":[{"raw_affiliation_string":"PUC-Rio,Departamento de Informatica,Rio de Janeiro,Brazil","institution_ids":["https://openalex.org/I2699952"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5092820895"],"corresponding_institution_ids":["https://openalex.org/I2699952"],"apc_list":null,"apc_paid":null,"fwci":0.3804,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.65120499,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":null,"issue":null,"first_page":"1","last_page":"8"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11125","display_name":"Petri Nets in System Modeling","score":0.9603999853134155,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11125","display_name":"Petri Nets in System Modeling","score":0.9603999853134155,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10904","display_name":"Embedded Systems Design Techniques","score":0.9121000170707703,"subfield":{"id":"https://openalex.org/subfields/1708","display_name":"Hardware and Architecture"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/petri-net","display_name":"Petri net","score":0.8676249384880066},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6607540845870972},{"id":"https://openalex.org/keywords/process-architecture","display_name":"Process architecture","score":0.5079062581062317},{"id":"https://openalex.org/keywords/insulin","display_name":"Insulin","score":0.47943633794784546},{"id":"https://openalex.org/keywords/biosynthesis","display_name":"Biosynthesis","score":0.44355759024620056},{"id":"https://openalex.org/keywords/petri-dish","display_name":"Petri dish","score":0.4404556453227997},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.269074946641922},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.1923401653766632},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.14964503049850464},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.13905742764472961},{"id":"https://openalex.org/keywords/biotechnology","display_name":"Biotechnology","score":0.12764516472816467}],"concepts":[{"id":"https://openalex.org/C38677869","wikidata":"https://www.wikidata.org/wiki/Q724168","display_name":"Petri net","level":2,"score":0.8676249384880066},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6607540845870972},{"id":"https://openalex.org/C136155141","wikidata":"https://www.wikidata.org/wiki/Q7247260","display_name":"Process architecture","level":3,"score":0.5079062581062317},{"id":"https://openalex.org/C2779306644","wikidata":"https://www.wikidata.org/wiki/Q2002370","display_name":"Insulin","level":2,"score":0.47943633794784546},{"id":"https://openalex.org/C553450214","wikidata":"https://www.wikidata.org/wiki/Q851162","display_name":"Biosynthesis","level":3,"score":0.44355759024620056},{"id":"https://openalex.org/C146763376","wikidata":"https://www.wikidata.org/wiki/Q81714","display_name":"Petri dish","level":2,"score":0.4404556453227997},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.269074946641922},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.1923401653766632},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.14964503049850464},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.13905742764472961},{"id":"https://openalex.org/C150903083","wikidata":"https://www.wikidata.org/wiki/Q7108","display_name":"Biotechnology","level":1,"score":0.12764516472816467},{"id":"https://openalex.org/C181199279","wikidata":"https://www.wikidata.org/wiki/Q8047","display_name":"Enzyme","level":2,"score":0.0},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/cibcb58642.2024.10702168","is_oa":false,"landing_page_url":"https://doi.org/10.1109/cibcb58642.2024.10702168","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2024 IEEE Conference on Computational Intelligence in Bioinformatics and Computational Biology (CIBCB)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/2","score":0.6499999761581421,"display_name":"Zero hunger"}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":38,"referenced_works":["https://openalex.org/W72627909","https://openalex.org/W1481048557","https://openalex.org/W1608205571","https://openalex.org/W1697788292","https://openalex.org/W1756240635","https://openalex.org/W2024503174","https://openalex.org/W2053012958","https://openalex.org/W2123372635","https://openalex.org/W2142340571","https://openalex.org/W2290568693","https://openalex.org/W2421023472","https://openalex.org/W2731303651","https://openalex.org/W2809544086","https://openalex.org/W2889562110","https://openalex.org/W2989244608","https://openalex.org/W2996406703","https://openalex.org/W3012300853","https://openalex.org/W3101785512","https://openalex.org/W3119743465","https://openalex.org/W3175069962","https://openalex.org/W3192284387","https://openalex.org/W3201132720","https://openalex.org/W4205953008","https://openalex.org/W4212938657","https://openalex.org/W4214718081","https://openalex.org/W4237794081","https://openalex.org/W4304806905","https://openalex.org/W4321748940","https://openalex.org/W4361010931","https://openalex.org/W4366688771","https://openalex.org/W4380235256","https://openalex.org/W4380790557","https://openalex.org/W4385186882","https://openalex.org/W4385727351","https://openalex.org/W4386363600","https://openalex.org/W4386435916","https://openalex.org/W6803197922","https://openalex.org/W7027108269"],"related_works":["https://openalex.org/W1938017683","https://openalex.org/W224189422","https://openalex.org/W2158814988","https://openalex.org/W1543378523","https://openalex.org/W2355954834","https://openalex.org/W2285444239","https://openalex.org/W2257573499","https://openalex.org/W2901841247","https://openalex.org/W2091260341","https://openalex.org/W597347111"],"abstract_inverted_index":{"Insulin":[0],"synthesis":[1],"is":[2],"a":[3,10,17,66],"complex":[4],"and":[5,23,49,64,71],"essential":[6],"biological":[7,62,75],"process":[8,22],"involving":[9],"series":[11],"of":[12,19,39],"interconnected":[13],"subprocesses.":[14],"We":[15],"present":[16],"model":[18],"the":[20,57],"translational":[21],"post-translational":[24],"modifications":[25],"occurring":[26],"in":[27],"insulin":[28],"biosynthesis.":[29],"Using":[30],"Colored":[31],"Petri":[32],"Nets":[33],"(CPNs),":[34],"we":[35],"accurately":[36],"represent":[37],"sets":[38],"interactions":[40],"among":[41],"components":[42],"such":[43],"as":[44],"amino":[45],"acids,":[46],"polypeptide":[47],"chains,":[48],"other":[50,73],"cellular":[51],"compounds.":[52],"This":[53],"CPN":[54],"framework":[55],"captures":[56],"intricate":[58],"state":[59],"changes":[60],"within":[61],"processes":[63],"establishes":[65],"theoretical":[67],"foundation":[68],"for":[69],"modeling":[70],"analyzing":[72],"critical":[74],"processes.":[76]},"counts_by_year":[{"year":2024,"cited_by_count":1}],"updated_date":"2025-12-27T23:08:20.325037","created_date":"2025-10-10T00:00:00"}
