{"id":"https://openalex.org/W4387251467","doi":"https://doi.org/10.1109/cibcb56990.2023.10264875","title":"Neural Architecture Search for Genomic Sequence Data","display_name":"Neural Architecture Search for Genomic Sequence Data","publication_year":2023,"publication_date":"2023-08-29","ids":{"openalex":"https://openalex.org/W4387251467","doi":"https://doi.org/10.1109/cibcb56990.2023.10264875"},"language":"en","primary_location":{"id":"doi:10.1109/cibcb56990.2023.10264875","is_oa":false,"landing_page_url":"https://doi.org/10.1109/cibcb56990.2023.10264875","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2023 IEEE Conference on Computational Intelligence in Bioinformatics and Computational Biology (CIBCB)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref","datacite"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://doi.org/10.5282/ubm/epub.91037","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5092985090","display_name":"Amadeu Scheppach","orcid":null},"institutions":[{"id":"https://openalex.org/I3018771216","display_name":"LMU Klinikum","ror":"https://ror.org/02jet3w32","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I3018771216","https://openalex.org/I8204097"]},{"id":"https://openalex.org/I8204097","display_name":"Ludwig-Maximilians-Universit\u00e4t M\u00fcnchen","ror":"https://ror.org/05591te55","country_code":"DE","type":"education","lineage":["https://openalex.org/I8204097"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Amadeu Scheppach","raw_affiliation_strings":["LMU Munich,Department of Statistics,Munich,Germany","Department of Statistics, LMU Munich, Munich, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"LMU Munich,Department of Statistics,Munich,Germany","institution_ids":["https://openalex.org/I8204097"]},{"raw_affiliation_string":"Department of Statistics, LMU Munich, Munich, Germany","institution_ids":["https://openalex.org/I3018771216","https://openalex.org/I8204097"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5026986300","display_name":"H\u00fcseyin Anil G\u00fcnd\u00fcz","orcid":"https://orcid.org/0009-0007-1700-789X"},"institutions":[{"id":"https://openalex.org/I292141241","display_name":"Munich School of Philosophy","ror":"https://ror.org/02kqy4228","country_code":"DE","type":"education","lineage":["https://openalex.org/I292141241"]},{"id":"https://openalex.org/I4403386549","display_name":"Munich Center for Machine Learning","ror":"https://ror.org/02nfy3535","country_code":null,"type":"education","lineage":["https://openalex.org/I4403386549","https://openalex.org/I62916508","https://openalex.org/I8204097"]},{"id":"https://openalex.org/I8204097","display_name":"Ludwig-Maximilians-Universit\u00e4t M\u00fcnchen","ror":"https://ror.org/05591te55","country_code":"DE","type":"education","lineage":["https://openalex.org/I8204097"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"H\u00fcseyin Anil G\u00fcnd\u00fcz","raw_affiliation_strings":["LMU Munich and Munich Center for Machine Learning,Department of Statistics,Munich,Germany","Department of Statistics, LMU Munich and Munich Center for Machine Learning, Munich, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"LMU Munich and Munich Center for Machine Learning,Department of Statistics,Munich,Germany","institution_ids":["https://openalex.org/I8204097","https://openalex.org/I292141241"]},{"raw_affiliation_string":"Department of Statistics, LMU Munich and Munich Center for Machine Learning, Munich, Germany","institution_ids":["https://openalex.org/I8204097","https://openalex.org/I4403386549"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5067657199","display_name":"Emilio Dorigatti","orcid":"https://orcid.org/0000-0002-6829-7766"},"institutions":[{"id":"https://openalex.org/I292141241","display_name":"Munich School of Philosophy","ror":"https://ror.org/02kqy4228","country_code":"DE","type":"education","lineage":["https://openalex.org/I292141241"]},{"id":"https://openalex.org/I4403386549","display_name":"Munich Center for Machine Learning","ror":"https://ror.org/02nfy3535","country_code":null,"type":"education","lineage":["https://openalex.org/I4403386549","https://openalex.org/I62916508","https://openalex.org/I8204097"]},{"id":"https://openalex.org/I8204097","display_name":"Ludwig-Maximilians-Universit\u00e4t M\u00fcnchen","ror":"https://ror.org/05591te55","country_code":"DE","type":"education","lineage":["https://openalex.org/I8204097"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Emilio Dorigatti","raw_affiliation_strings":["LMU Munich and Munich Center for Machine Learning,Department of Statistics,Munich,Germany","Department of Statistics, LMU Munich and Munich Center for Machine Learning, Munich, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"LMU Munich and Munich Center for Machine Learning,Department of Statistics,Munich,Germany","institution_ids":["https://openalex.org/I8204097","https://openalex.org/I292141241"]},{"raw_affiliation_string":"Department of Statistics, LMU Munich and Munich Center for Machine Learning, Munich, Germany","institution_ids":["https://openalex.org/I8204097","https://openalex.org/I4403386549"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5029781282","display_name":"Philipp C. M\u00fcnch","orcid":"https://orcid.org/0000-0003-3233-9693"},"institutions":[{"id":"https://openalex.org/I4210124929","display_name":"Helmholtz Centre for Infection Research","ror":"https://ror.org/03d0p2685","country_code":"DE","type":"facility","lineage":["https://openalex.org/I1305996414","https://openalex.org/I4210124929"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Philipp C. M\u00fcnch","raw_affiliation_strings":["Helmholtz Centre for Infection Research,Department for Computational Biology of Infection Research,Braunschweig,Germany","Department for Computational Biology of Infection Research, Helmholtz Centre for Infection Research, Braunschweig, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Helmholtz Centre for Infection Research,Department for Computational Biology of Infection Research,Braunschweig,Germany","institution_ids":["https://openalex.org/I4210124929"]},{"raw_affiliation_string":"Department for Computational Biology of Infection Research, Helmholtz Centre for Infection Research, Braunschweig, Germany","institution_ids":["https://openalex.org/I4210124929"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5081103408","display_name":"Alice C. McHardy","orcid":"https://orcid.org/0000-0003-2370-3430"},"institutions":[{"id":"https://openalex.org/I4210124929","display_name":"Helmholtz Centre for Infection Research","ror":"https://ror.org/03d0p2685","country_code":"DE","type":"facility","lineage":["https://openalex.org/I1305996414","https://openalex.org/I4210124929"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Alice C. McHardy","raw_affiliation_strings":["Helmholtz Centre for Infection Research,Department for Computational Biology of Infection Research,Braunschweig,Germany","Department for Computational Biology of Infection Research, Helmholtz Centre for Infection Research, Braunschweig, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Helmholtz Centre for Infection Research,Department for Computational Biology of Infection Research,Braunschweig,Germany","institution_ids":["https://openalex.org/I4210124929"]},{"raw_affiliation_string":"Department for Computational Biology of Infection Research, Helmholtz Centre for Infection Research, Braunschweig, Germany","institution_ids":["https://openalex.org/I4210124929"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5034720166","display_name":"Bernd Bischl","orcid":null},"institutions":[{"id":"https://openalex.org/I292141241","display_name":"Munich School of Philosophy","ror":"https://ror.org/02kqy4228","country_code":"DE","type":"education","lineage":["https://openalex.org/I292141241"]},{"id":"https://openalex.org/I4403386549","display_name":"Munich Center for Machine Learning","ror":"https://ror.org/02nfy3535","country_code":null,"type":"education","lineage":["https://openalex.org/I4403386549","https://openalex.org/I62916508","https://openalex.org/I8204097"]},{"id":"https://openalex.org/I8204097","display_name":"Ludwig-Maximilians-Universit\u00e4t M\u00fcnchen","ror":"https://ror.org/05591te55","country_code":"DE","type":"education","lineage":["https://openalex.org/I8204097"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Bernd Bischl","raw_affiliation_strings":["LMU Munich and Munich Center for Machine Learning,Department of Statistics,Munich,Germany","Department of Statistics, LMU Munich and Munich Center for Machine Learning, Munich, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"LMU Munich and Munich Center for Machine Learning,Department of Statistics,Munich,Germany","institution_ids":["https://openalex.org/I8204097","https://openalex.org/I292141241"]},{"raw_affiliation_string":"Department of Statistics, LMU Munich and Munich Center for Machine Learning, Munich, Germany","institution_ids":["https://openalex.org/I8204097","https://openalex.org/I4403386549"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076635383","display_name":"Mina Rezaei","orcid":"https://orcid.org/0000-0001-6994-6345"},"institutions":[{"id":"https://openalex.org/I292141241","display_name":"Munich School of Philosophy","ror":"https://ror.org/02kqy4228","country_code":"DE","type":"education","lineage":["https://openalex.org/I292141241"]},{"id":"https://openalex.org/I4403386549","display_name":"Munich Center for Machine Learning","ror":"https://ror.org/02nfy3535","country_code":null,"type":"education","lineage":["https://openalex.org/I4403386549","https://openalex.org/I62916508","https://openalex.org/I8204097"]},{"id":"https://openalex.org/I8204097","display_name":"Ludwig-Maximilians-Universit\u00e4t M\u00fcnchen","ror":"https://ror.org/05591te55","country_code":"DE","type":"education","lineage":["https://openalex.org/I8204097"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Mina Rezaei","raw_affiliation_strings":["LMU Munich and Munich Center for Machine Learning,Department of Statistics,Munich,Germany","Department of Statistics, LMU Munich and Munich Center for Machine Learning, Munich, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"LMU Munich and Munich Center for Machine Learning,Department of Statistics,Munich,Germany","institution_ids":["https://openalex.org/I8204097","https://openalex.org/I292141241"]},{"raw_affiliation_string":"Department of Statistics, LMU Munich and Munich Center for Machine Learning, Munich, Germany","institution_ids":["https://openalex.org/I8204097","https://openalex.org/I4403386549"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5101680868","display_name":"Martin Binder","orcid":null},"institutions":[{"id":"https://openalex.org/I292141241","display_name":"Munich School of Philosophy","ror":"https://ror.org/02kqy4228","country_code":"DE","type":"education","lineage":["https://openalex.org/I292141241"]},{"id":"https://openalex.org/I4403386549","display_name":"Munich Center for Machine Learning","ror":"https://ror.org/02nfy3535","country_code":null,"type":"education","lineage":["https://openalex.org/I4403386549","https://openalex.org/I62916508","https://openalex.org/I8204097"]},{"id":"https://openalex.org/I8204097","display_name":"Ludwig-Maximilians-Universit\u00e4t M\u00fcnchen","ror":"https://ror.org/05591te55","country_code":"DE","type":"education","lineage":["https://openalex.org/I8204097"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Martin Binder","raw_affiliation_strings":["LMU Munich and Munich Center for Machine Learning,Department of Statistics,Munich,Germany","Department of Statistics, LMU Munich and Munich Center for Machine Learning, Munich, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"LMU Munich and Munich Center for Machine Learning,Department of Statistics,Munich,Germany","institution_ids":["https://openalex.org/I8204097","https://openalex.org/I292141241"]},{"raw_affiliation_string":"Department of Statistics, LMU Munich and Munich Center for Machine Learning, Munich, Germany","institution_ids":["https://openalex.org/I8204097","https://openalex.org/I4403386549"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.1359,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.57878415,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":null,"issue":null,"first_page":"1","last_page":"10"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9965000152587891,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7335109114646912},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.7186928987503052},{"id":"https://openalex.org/keywords/artificial-neural-network","display_name":"Artificial neural network","score":0.5567411184310913},{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.525288462638855},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5118962526321411},{"id":"https://openalex.org/keywords/genome-project","display_name":"Genome project","score":0.5110732316970825},{"id":"https://openalex.org/keywords/task","display_name":"Task (project management)","score":0.4802846610546112},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.4759773313999176},{"id":"https://openalex.org/keywords/human-genome","display_name":"Human genome","score":0.4613371789455414},{"id":"https://openalex.org/keywords/genomics","display_name":"Genomics","score":0.45991694927215576},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.43118977546691895},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.4081823229789734},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3884945511817932},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3732408881187439},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.15486875176429749},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.13941192626953125},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.11691272258758545}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7335109114646912},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.7186928987503052},{"id":"https://openalex.org/C50644808","wikidata":"https://www.wikidata.org/wiki/Q192776","display_name":"Artificial neural network","level":2,"score":0.5567411184310913},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.525288462638855},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5118962526321411},{"id":"https://openalex.org/C89566754","wikidata":"https://www.wikidata.org/wiki/Q2273828","display_name":"Genome project","level":4,"score":0.5110732316970825},{"id":"https://openalex.org/C2780451532","wikidata":"https://www.wikidata.org/wiki/Q759676","display_name":"Task (project management)","level":2,"score":0.4802846610546112},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.4759773313999176},{"id":"https://openalex.org/C197077220","wikidata":"https://www.wikidata.org/wiki/Q720988","display_name":"Human genome","level":4,"score":0.4613371789455414},{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.45991694927215576},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.43118977546691895},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.4081823229789734},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3884945511817932},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3732408881187439},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.15486875176429749},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.13941192626953125},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.11691272258758545},{"id":"https://openalex.org/C187736073","wikidata":"https://www.wikidata.org/wiki/Q2920921","display_name":"Management","level":1,"score":0.0},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1109/cibcb56990.2023.10264875","is_oa":false,"landing_page_url":"https://doi.org/10.1109/cibcb56990.2023.10264875","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2023 IEEE Conference on Computational Intelligence in Bioinformatics and Computational Biology (CIBCB)","raw_type":"proceedings-article"},{"id":"pmh:oai:epub.ub.uni-muenchen.de:91037","is_oa":false,"landing_page_url":"https://epub.ub.uni-muenchen.de/91037/","pdf_url":null,"source":{"id":"https://openalex.org/S4306401845","display_name":"Open access LMU (Ludwid Maxmilian's Universitat Munchen)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I8204097","host_organization_name":"Ludwig-Maximilians-Universit\u00e4t M\u00fcnchen","host_organization_lineage":["https://openalex.org/I8204097"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"doc-type:masterThesis"},{"id":"doi:10.5282/ubm/epub.91037","is_oa":true,"landing_page_url":"https://doi.org/10.5282/ubm/epub.91037","pdf_url":null,"source":{"id":"https://openalex.org/S7407052039","display_name":"Universit\u00e4tsbibliothek der LMU","issn_l":null,"issn":[],"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"article-journal"}],"best_oa_location":{"id":"doi:10.5282/ubm/epub.91037","is_oa":true,"landing_page_url":"https://doi.org/10.5282/ubm/epub.91037","pdf_url":null,"source":{"id":"https://openalex.org/S7407052039","display_name":"Universit\u00e4tsbibliothek der LMU","issn_l":null,"issn":[],"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"article-journal"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320311649","display_name":"Ministry of Education","ror":"https://ror.org/036nq5137"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":63,"referenced_works":["https://openalex.org/W1575029535","https://openalex.org/W1901129140","https://openalex.org/W2064675550","https://openalex.org/W2097998348","https://openalex.org/W2126559945","https://openalex.org/W2131241448","https://openalex.org/W2161136893","https://openalex.org/W2194775991","https://openalex.org/W2198606573","https://openalex.org/W2212703438","https://openalex.org/W2336509392","https://openalex.org/W2553303224","https://openalex.org/W2554247923","https://openalex.org/W2789367970","https://openalex.org/W2885311373","https://openalex.org/W2896262061","https://openalex.org/W2918598256","https://openalex.org/W2919115771","https://openalex.org/W2944959599","https://openalex.org/W2951104886","https://openalex.org/W2962746461","https://openalex.org/W2963815651","https://openalex.org/W2964015378","https://openalex.org/W2964081807","https://openalex.org/W2964515685","https://openalex.org/W2971635962","https://openalex.org/W2972036023","https://openalex.org/W2973098646","https://openalex.org/W2981985696","https://openalex.org/W2989915159","https://openalex.org/W3036780692","https://openalex.org/W3092832969","https://openalex.org/W3093858143","https://openalex.org/W3095194728","https://openalex.org/W3118324533","https://openalex.org/W3120084484","https://openalex.org/W3134762218","https://openalex.org/W3139240024","https://openalex.org/W3177828909","https://openalex.org/W3203588026","https://openalex.org/W4246413330","https://openalex.org/W4291652457","https://openalex.org/W4385245566","https://openalex.org/W6634542218","https://openalex.org/W6639824700","https://openalex.org/W6674385629","https://openalex.org/W6678664249","https://openalex.org/W6678911119","https://openalex.org/W6688167117","https://openalex.org/W6726873649","https://openalex.org/W6729956949","https://openalex.org/W6730169791","https://openalex.org/W6739901393","https://openalex.org/W6752515464","https://openalex.org/W6753278433","https://openalex.org/W6757628026","https://openalex.org/W6759828284","https://openalex.org/W6766225098","https://openalex.org/W6767500049","https://openalex.org/W6772036788","https://openalex.org/W6785063415","https://openalex.org/W6791394245","https://openalex.org/W6828183479"],"related_works":["https://openalex.org/W2162782320","https://openalex.org/W2059565715","https://openalex.org/W3111061871","https://openalex.org/W2009940763","https://openalex.org/W2114034054","https://openalex.org/W4232413416","https://openalex.org/W45826765","https://openalex.org/W1585937270","https://openalex.org/W2537312848","https://openalex.org/W1760213857"],"abstract_inverted_index":{"Deep":[0],"learning":[1,146],"has":[2],"enabled":[3],"outstanding":[4],"progress":[5],"on":[6,85,119,139],"bioinformatics":[7,158],"datasets":[8],"and":[9,25,33,54,105,115,120,131],"a":[10,52,76,140],"variety":[11],"of":[12,20,27,35,124],"tasks,":[13],"such":[14],"as":[15],"protein":[16],"structure":[17],"prediction,":[18],"identification":[19],"regulatory":[21],"regions,":[22],"genome":[23,86,143],"annotation,":[24],"interpretation":[26],"the":[28,122,128],"noncoding":[29],"genome.":[30],"The":[31],"layout":[32],"configuration":[34],"neural":[36,64,137],"networks":[37],"used":[38,142],"for":[39,80,91,95,157],"these":[40],"tasks":[41],"have":[42],"mostly":[43],"been":[44],"developed":[45,173],"manually":[46,135,172],"by":[47,167],"human":[48],"experts,":[49],"which":[50],"is":[51,59],"time-consuming":[53],"error-prone":[55],"process.":[56],"Therefore,":[57],"there":[58],"growing":[60],"interest":[61],"in":[62,69],"automated":[63],"architecture":[65],"search":[66,78],"(NAS)":[67],"methods":[68,130,152,170],"bioinformatics.":[70],"In":[71],"this":[72],"paper,":[73],"we":[74,99,108],"present":[75],"novel":[77,111],"space":[79],"NAS":[81,93,112,151,169],"algorithms":[82,94],"that":[83,98,117,150,164],"operate":[84],"data,":[87],"thus":[88],"creating":[89],"extensions":[90],"existing":[92],"sequence":[96,144,159],"data":[97],"name":[100],"Genome-DARTS,":[101],"Genome-P-DARTS,":[102],"Genome-BONAS,":[103],"Genome-SH,":[104],"Genome-RS.":[106],"Moreover,":[107],"introduce":[109],"two":[110],"algorithms,":[113],"CWP-DARTS":[114],"EDPDARTS,":[116],"build":[118],"extend":[121],"idea":[123],"P-DARTS.":[125],"We":[126],"evaluate":[127],"presented":[129],"compare":[132],"them":[133],"to":[134,148],"designed":[136],"architectures":[138,165,174],"widely":[141],"machine":[145],"task":[147],"show":[149,163],"can":[153],"be":[154],"adapted":[155],"well":[156],"datasets.":[160],"Our":[161],"experiments":[162],"optimized":[166],"our":[168],"outperform":[171],"while":[175],"having":[176],"significantly":[177],"fewer":[178],"parameters.":[179]},"counts_by_year":[{"year":2024,"cited_by_count":1}],"updated_date":"2026-07-02T09:51:11.867554","created_date":"2025-10-10T00:00:00"}
