{"id":"https://openalex.org/W1927956380","doi":"https://doi.org/10.1109/cibcb.2015.7300316","title":"A high-speed real-time nanopore signal detector","display_name":"A high-speed real-time nanopore signal detector","publication_year":2015,"publication_date":"2015-08-01","ids":{"openalex":"https://openalex.org/W1927956380","doi":"https://doi.org/10.1109/cibcb.2015.7300316","mag":"1927956380"},"language":"en","primary_location":{"id":"doi:10.1109/cibcb.2015.7300316","is_oa":false,"landing_page_url":"https://doi.org/10.1109/cibcb.2015.7300316","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2015 IEEE Conference on Computational Intelligence in Bioinformatics and Computational Biology (CIBCB)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5058847164","display_name":"Yiyun Huang","orcid":"https://orcid.org/0000-0001-7004-4904"},"institutions":[{"id":"https://openalex.org/I192455969","display_name":"York University","ror":"https://ror.org/05fq50484","country_code":"CA","type":"education","lineage":["https://openalex.org/I192455969"]}],"countries":["CA"],"is_corresponding":true,"raw_author_name":"Yiyun Huang","raw_affiliation_strings":["Electrical Engineering and Computer Science York University, Toronto, Canada","Electrical Engineering and Computer Science, York University, Toronto, Canada M3J-1P3"],"affiliations":[{"raw_affiliation_string":"Electrical Engineering and Computer Science York University, Toronto, Canada","institution_ids":["https://openalex.org/I192455969"]},{"raw_affiliation_string":"Electrical Engineering and Computer Science, York University, Toronto, Canada M3J-1P3","institution_ids":["https://openalex.org/I192455969"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5048327293","display_name":"Sebastian Magierowski","orcid":"https://orcid.org/0000-0001-6333-0769"},"institutions":[{"id":"https://openalex.org/I192455969","display_name":"York University","ror":"https://ror.org/05fq50484","country_code":"CA","type":"education","lineage":["https://openalex.org/I192455969"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Sebastian Magierowski","raw_affiliation_strings":["Electrical Engineering and Computer Science York University, Toronto, Canada","Electrical Engineering and Computer Science, York University, Toronto, Canada M3J-1P3"],"affiliations":[{"raw_affiliation_string":"Electrical Engineering and Computer Science York University, Toronto, Canada","institution_ids":["https://openalex.org/I192455969"]},{"raw_affiliation_string":"Electrical Engineering and Computer Science, York University, Toronto, Canada M3J-1P3","institution_ids":["https://openalex.org/I192455969"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5085670931","display_name":"Ebrahim Ghafar\u2010Zadeh","orcid":"https://orcid.org/0000-0002-7090-2304"},"institutions":[{"id":"https://openalex.org/I192455969","display_name":"York University","ror":"https://ror.org/05fq50484","country_code":"CA","type":"education","lineage":["https://openalex.org/I192455969"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Ebrahim Ghafar-Zadeh","raw_affiliation_strings":["Electrical Engineering and Computer Science York University, Toronto, Canada","Electrical Engineering and Computer Science, York University, Toronto, Canada M3J-1P3"],"affiliations":[{"raw_affiliation_string":"Electrical Engineering and Computer Science York University, Toronto, Canada","institution_ids":["https://openalex.org/I192455969"]},{"raw_affiliation_string":"Electrical Engineering and Computer Science, York University, Toronto, Canada M3J-1P3","institution_ids":["https://openalex.org/I192455969"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5101560555","display_name":"Chengjie Wang","orcid":"https://orcid.org/0000-0001-8147-3704"},"institutions":[{"id":"https://openalex.org/I192455969","display_name":"York University","ror":"https://ror.org/05fq50484","country_code":"CA","type":"education","lineage":["https://openalex.org/I192455969"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Chengjie Wang","raw_affiliation_strings":["Electrical Engineering and Computer Science York University, Toronto, Canada","Electrical Engineering and Computer Science, York University, Toronto, Canada M3J-1P3"],"affiliations":[{"raw_affiliation_string":"Electrical Engineering and Computer Science York University, Toronto, Canada","institution_ids":["https://openalex.org/I192455969"]},{"raw_affiliation_string":"Electrical Engineering and Computer Science, York University, Toronto, Canada M3J-1P3","institution_ids":["https://openalex.org/I192455969"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5058847164"],"corresponding_institution_ids":["https://openalex.org/I192455969"],"apc_list":null,"apc_paid":null,"fwci":0.7081,"has_fulltext":false,"cited_by_count":8,"citation_normalized_percentile":{"value":0.70194972,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":"78","issue":null,"first_page":"1","last_page":"8"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11582","display_name":"Nanopore and Nanochannel Transport Studies","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/2204","display_name":"Biomedical Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11582","display_name":"Nanopore and Nanochannel Transport Studies","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/2204","display_name":"Biomedical Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10572","display_name":"Geophysical and Geoelectrical Methods","score":0.9887999892234802,"subfield":{"id":"https://openalex.org/subfields/1908","display_name":"Geophysics"},"field":{"id":"https://openalex.org/fields/19","display_name":"Earth and Planetary Sciences"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11255","display_name":"Microfluidic and Bio-sensing Technologies","score":0.9733999967575073,"subfield":{"id":"https://openalex.org/subfields/2204","display_name":"Biomedical Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/nanopore","display_name":"Nanopore","score":0.8247405290603638},{"id":"https://openalex.org/keywords/detector","display_name":"Detector","score":0.7508206367492676},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7092522382736206},{"id":"https://openalex.org/keywords/signal","display_name":"SIGNAL (programming language)","score":0.6151179075241089},{"id":"https://openalex.org/keywords/noise","display_name":"Noise (video)","score":0.5666382908821106},{"id":"https://openalex.org/keywords/detection-theory","display_name":"Detection theory","score":0.5249019861221313},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.45951026678085327},{"id":"https://openalex.org/keywords/base","display_name":"Base (topology)","score":0.43870818614959717},{"id":"https://openalex.org/keywords/real-time-computing","display_name":"Real-time computing","score":0.35242682695388794},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.24852722883224487},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.16401487588882446},{"id":"https://openalex.org/keywords/telecommunications","display_name":"Telecommunications","score":0.0955159068107605},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.09415248036384583}],"concepts":[{"id":"https://openalex.org/C141795571","wikidata":"https://www.wikidata.org/wiki/Q580942","display_name":"Nanopore","level":2,"score":0.8247405290603638},{"id":"https://openalex.org/C94915269","wikidata":"https://www.wikidata.org/wiki/Q1834857","display_name":"Detector","level":2,"score":0.7508206367492676},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7092522382736206},{"id":"https://openalex.org/C2779843651","wikidata":"https://www.wikidata.org/wiki/Q7390335","display_name":"SIGNAL (programming language)","level":2,"score":0.6151179075241089},{"id":"https://openalex.org/C99498987","wikidata":"https://www.wikidata.org/wiki/Q2210247","display_name":"Noise (video)","level":3,"score":0.5666382908821106},{"id":"https://openalex.org/C137270730","wikidata":"https://www.wikidata.org/wiki/Q120811","display_name":"Detection theory","level":3,"score":0.5249019861221313},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.45951026678085327},{"id":"https://openalex.org/C42058472","wikidata":"https://www.wikidata.org/wiki/Q810214","display_name":"Base (topology)","level":2,"score":0.43870818614959717},{"id":"https://openalex.org/C79403827","wikidata":"https://www.wikidata.org/wiki/Q3988","display_name":"Real-time computing","level":1,"score":0.35242682695388794},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.24852722883224487},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.16401487588882446},{"id":"https://openalex.org/C76155785","wikidata":"https://www.wikidata.org/wiki/Q418","display_name":"Telecommunications","level":1,"score":0.0955159068107605},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.09415248036384583},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.0},{"id":"https://openalex.org/C42360764","wikidata":"https://www.wikidata.org/wiki/Q83588","display_name":"Chemical engineering","level":1,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/cibcb.2015.7300316","is_oa":false,"landing_page_url":"https://doi.org/10.1109/cibcb.2015.7300316","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2015 IEEE Conference on Computational Intelligence in Bioinformatics and Computational Biology (CIBCB)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.6800000071525574,"display_name":"Peace, Justice and strong institutions","id":"https://metadata.un.org/sdg/16"}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":20,"referenced_works":["https://openalex.org/W1998948607","https://openalex.org/W2011993186","https://openalex.org/W2013027736","https://openalex.org/W2016656173","https://openalex.org/W2027506564","https://openalex.org/W2034456268","https://openalex.org/W2041545661","https://openalex.org/W2051903196","https://openalex.org/W2075617494","https://openalex.org/W2094013156","https://openalex.org/W2099674667","https://openalex.org/W2118609874","https://openalex.org/W2127407003","https://openalex.org/W2137018822","https://openalex.org/W2142121482","https://openalex.org/W2142827832","https://openalex.org/W2152953137","https://openalex.org/W2159396143","https://openalex.org/W2325150501","https://openalex.org/W6659104803"],"related_works":["https://openalex.org/W2043302357","https://openalex.org/W2359093779","https://openalex.org/W1856957993","https://openalex.org/W1978047861","https://openalex.org/W1966535600","https://openalex.org/W1965991469","https://openalex.org/W2063020798","https://openalex.org/W1995192376","https://openalex.org/W2156410490","https://openalex.org/W2028943099"],"abstract_inverted_index":{"An":[0],"improved-accuracy":[1],"algorithm":[2],"for":[3],"real-time":[4],"nanopore-based":[5],"signal":[6],"detection":[7,87],"(e.g.":[8],"base":[9],"calling)":[10],"is":[11,15],"introduced.":[12],"The":[13],"approach":[14],"based":[16],"on":[17],"the":[18,36,62],"cumulative":[19],"sum":[20],"technique":[21,64],"but":[22],"employs":[23],"a":[24,29,43,48,60],"decision-directed":[25],"policy":[26],"coupled":[27],"with":[28],"post-decision":[30],"correction":[31],"mechanism.":[32],"These":[33],"additions":[34],"allow":[35],"improved":[37],"detector":[38],"to":[39],"achieve":[40],"at":[41],"least":[42],"10\u00d7":[44],"accuracy":[45],"improvement":[46],"over":[47],"previously":[49],"reported":[50],"method":[51],"while":[52],"tolerating":[53],"much":[54],"greater":[55],"decision":[56],"threshold":[57],"variation.":[58],"As":[59],"result":[61],"new":[63],"can":[65],"better":[66],"accommodate":[67],"high-speed":[68],"embedded":[69],"nanopore":[70],"measurement":[71],"applications":[72],"such":[73],"as":[74],"DNA":[75],"sequencing":[76],"where":[77],"high-frequency":[78],"noise":[79],"and":[80],"coarse":[81],"data":[82],"conversion":[83],"otherwise":[84],"profoundly":[85],"degrade":[86],"accuracy.":[88]},"counts_by_year":[{"year":2023,"cited_by_count":1},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":2},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
