{"id":"https://openalex.org/W2144504734","doi":"https://doi.org/10.1109/cibcb.2007.4221198","title":"Novel Data Mining Techniques in aCGH based Breast Cancer Subtypes Profiling: the Biological Perspective","display_name":"Novel Data Mining Techniques in aCGH based Breast Cancer Subtypes Profiling: the Biological Perspective","publication_year":2007,"publication_date":"2007-04-01","ids":{"openalex":"https://openalex.org/W2144504734","doi":"https://doi.org/10.1109/cibcb.2007.4221198","mag":"2144504734"},"language":"en","primary_location":{"id":"doi:10.1109/cibcb.2007.4221198","is_oa":false,"landing_page_url":"https://doi.org/10.1109/cibcb.2007.4221198","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2007 IEEE Symposium on Computational Intelligence and Bioinformatics and Computational Biology","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5083704013","display_name":"Filippo Menolascina","orcid":"https://orcid.org/0000-0002-4937-7912"},"institutions":[{"id":"https://openalex.org/I4210104343","display_name":"Radiation Oncology Institute","ror":"https://ror.org/019bz5n15","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210104343"]},{"id":"https://openalex.org/I4210134348","display_name":"National Cancer Institute","ror":"https://ror.org/044ybef51","country_code":"MY","type":"government","lineage":["https://openalex.org/I105292261","https://openalex.org/I4210134348"]}],"countries":["MY","US"],"is_corresponding":false,"raw_author_name":"F Menolascina","raw_affiliation_strings":["Clinical and Experimental Oncology Laboratory, National Cancer Institute, Bari, Italy","Clinical & Exp. Oncology Lab., National Cancer Inst., Bari"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Clinical and Experimental Oncology Laboratory, National Cancer Institute, Bari, Italy","institution_ids":["https://openalex.org/I4210104343","https://openalex.org/I4210134348"]},{"raw_affiliation_string":"Clinical & Exp. Oncology Lab., National Cancer Inst., Bari","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5053642255","display_name":"Stella Tommasi","orcid":"https://orcid.org/0000-0001-6897-4985"},"institutions":[{"id":"https://openalex.org/I4210104343","display_name":"Radiation Oncology Institute","ror":"https://ror.org/019bz5n15","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210104343"]},{"id":"https://openalex.org/I4210134348","display_name":"National Cancer Institute","ror":"https://ror.org/044ybef51","country_code":"MY","type":"government","lineage":["https://openalex.org/I105292261","https://openalex.org/I4210134348"]}],"countries":["MY","US"],"is_corresponding":false,"raw_author_name":"S Tommasi","raw_affiliation_strings":["Clinical and Experimental Oncology Laboratory, National Cancer Institute, Bari, Italy","Clinical & Exp. Oncology Lab., National Cancer Inst., Bari"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Clinical and Experimental Oncology Laboratory, National Cancer Institute, Bari, Italy","institution_ids":["https://openalex.org/I4210104343","https://openalex.org/I4210134348"]},{"raw_affiliation_string":"Clinical & Exp. Oncology Lab., National Cancer Inst., Bari","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5085211609","display_name":"Angelo Paradiso","orcid":"https://orcid.org/0000-0001-6495-2295"},"institutions":[{"id":"https://openalex.org/I4210104343","display_name":"Radiation Oncology Institute","ror":"https://ror.org/019bz5n15","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210104343"]},{"id":"https://openalex.org/I4210134348","display_name":"National Cancer Institute","ror":"https://ror.org/044ybef51","country_code":"MY","type":"government","lineage":["https://openalex.org/I105292261","https://openalex.org/I4210134348"]}],"countries":["MY","US"],"is_corresponding":false,"raw_author_name":"A Paradiso","raw_affiliation_strings":["Clinical and Experimental Oncology Laboratory, National Cancer Institute, Bari, Italy","Clinical & Exp. Oncology Lab., National Cancer Inst., Bari"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Clinical and Experimental Oncology Laboratory, National Cancer Institute, Bari, Italy","institution_ids":["https://openalex.org/I4210104343","https://openalex.org/I4210134348"]},{"raw_affiliation_string":"Clinical & Exp. Oncology Lab., National Cancer Inst., Bari","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5035480732","display_name":"Marco Cortellino","orcid":null},"institutions":[{"id":"https://openalex.org/I4210127672","display_name":"Engineering (Italy)","ror":"https://ror.org/045s9b323","country_code":"IT","type":"company","lineage":["https://openalex.org/I4210127672"]},{"id":"https://openalex.org/I68618741","display_name":"Polytechnic University of Bari","ror":"https://ror.org/03c44v465","country_code":"IT","type":"education","lineage":["https://openalex.org/I68618741"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"M Cortellino","raw_affiliation_strings":["Dept. of Electronics and Electrical Engineering, Polytechnic of Bari, Bari, Italy","Dept. of Electronics and Electrical Engineering, Polytechnic of Bari, Bari, 70125, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Dept. of Electronics and Electrical Engineering, Polytechnic of Bari, Bari, Italy","institution_ids":["https://openalex.org/I68618741"]},{"raw_affiliation_string":"Dept. of Electronics and Electrical Engineering, Polytechnic of Bari, Bari, 70125, Italy","institution_ids":["https://openalex.org/I4210127672","https://openalex.org/I68618741"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5050013557","display_name":"Vitoantonio Bevilacqua","orcid":"https://orcid.org/0000-0002-3088-0788"},"institutions":[{"id":"https://openalex.org/I68618741","display_name":"Polytechnic University of Bari","ror":"https://ror.org/03c44v465","country_code":"IT","type":"education","lineage":["https://openalex.org/I68618741"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"V Bevilacqua","raw_affiliation_strings":["Dept. of Electronics and Electrical Engineering, Polytechnic of Bari, Bari, Italy","Dept. of Electronics and Electrical Engineering, Polytechnic of Bari, Bari, 70125, Italy. bevilacqua@poliba.it"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Dept. of Electronics and Electrical Engineering, Polytechnic of Bari, Bari, Italy","institution_ids":["https://openalex.org/I68618741"]},{"raw_affiliation_string":"Dept. of Electronics and Electrical Engineering, Polytechnic of Bari, Bari, 70125, Italy. bevilacqua@poliba.it","institution_ids":["https://openalex.org/I68618741"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5112701792","display_name":"Giuseppe Mastronardi","orcid":null},"institutions":[{"id":"https://openalex.org/I4210127672","display_name":"Engineering (Italy)","ror":"https://ror.org/045s9b323","country_code":"IT","type":"company","lineage":["https://openalex.org/I4210127672"]},{"id":"https://openalex.org/I68618741","display_name":"Polytechnic University of Bari","ror":"https://ror.org/03c44v465","country_code":"IT","type":"education","lineage":["https://openalex.org/I68618741"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"G Mastronardi","raw_affiliation_strings":["Dept. of Electronics and Electrical Engineering, Polytechnic of Bari, Bari, Italy","Dept. of Electronics and Electrical Engineering, Polytechnic of Bari, Bari, 70125, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Dept. of Electronics and Electrical Engineering, Polytechnic of Bari, Bari, Italy","institution_ids":["https://openalex.org/I68618741"]},{"raw_affiliation_string":"Dept. of Electronics and Electrical Engineering, Polytechnic of Bari, Bari, 70125, Italy","institution_ids":["https://openalex.org/I4210127672","https://openalex.org/I68618741"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":4,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":4.1328,"has_fulltext":false,"cited_by_count":27,"citation_normalized_percentile":{"value":0.93645585,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":null,"issue":null,"first_page":"9","last_page":"16"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9757000207901001,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13937","display_name":"Genetics, Bioinformatics, and Biomedical Research","score":0.968999981880188,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/c4.5-algorithm","display_name":"C4.5 algorithm","score":0.7518419623374939},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7344862222671509},{"id":"https://openalex.org/keywords/profiling","display_name":"Profiling (computer programming)","score":0.5545051097869873},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.5293025970458984},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.5037471652030945},{"id":"https://openalex.org/keywords/pipeline","display_name":"Pipeline (software)","score":0.49944400787353516},{"id":"https://openalex.org/keywords/naive-bayes-classifier","display_name":"Naive Bayes classifier","score":0.4888112246990204},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.48219361901283264},{"id":"https://openalex.org/keywords/breast-cancer","display_name":"Breast cancer","score":0.47585102915763855},{"id":"https://openalex.org/keywords/cancer","display_name":"Cancer","score":0.21356967091560364},{"id":"https://openalex.org/keywords/support-vector-machine","display_name":"Support vector machine","score":0.19828268885612488},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.09210523962974548}],"concepts":[{"id":"https://openalex.org/C52003472","wikidata":"https://www.wikidata.org/wiki/Q1022655","display_name":"C4.5 algorithm","level":4,"score":0.7518419623374939},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7344862222671509},{"id":"https://openalex.org/C187191949","wikidata":"https://www.wikidata.org/wiki/Q1138496","display_name":"Profiling (computer programming)","level":2,"score":0.5545051097869873},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.5293025970458984},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.5037471652030945},{"id":"https://openalex.org/C43521106","wikidata":"https://www.wikidata.org/wiki/Q2165493","display_name":"Pipeline (software)","level":2,"score":0.49944400787353516},{"id":"https://openalex.org/C52001869","wikidata":"https://www.wikidata.org/wiki/Q812530","display_name":"Naive Bayes classifier","level":3,"score":0.4888112246990204},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.48219361901283264},{"id":"https://openalex.org/C530470458","wikidata":"https://www.wikidata.org/wiki/Q128581","display_name":"Breast cancer","level":3,"score":0.47585102915763855},{"id":"https://openalex.org/C121608353","wikidata":"https://www.wikidata.org/wiki/Q12078","display_name":"Cancer","level":2,"score":0.21356967091560364},{"id":"https://openalex.org/C12267149","wikidata":"https://www.wikidata.org/wiki/Q282453","display_name":"Support vector machine","level":2,"score":0.19828268885612488},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.09210523962974548},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1109/cibcb.2007.4221198","is_oa":false,"landing_page_url":"https://doi.org/10.1109/cibcb.2007.4221198","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2007 IEEE Symposium on Computational Intelligence and Bioinformatics and Computational Biology","raw_type":"proceedings-article"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.628.4889","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.628.4889","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://s3.amazonaws.com/publicationslist.org/data/bevilacqua/ref-30/cibcib.pdf","raw_type":"text"}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/10","display_name":"Reduced inequalities","score":0.5600000023841858}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":27,"referenced_works":["https://openalex.org/W42884220","https://openalex.org/W1484187172","https://openalex.org/W1485477604","https://openalex.org/W1501347617","https://openalex.org/W1566446310","https://openalex.org/W1893730733","https://openalex.org/W2029555993","https://openalex.org/W2070009756","https://openalex.org/W2102627654","https://openalex.org/W2109363337","https://openalex.org/W2110065044","https://openalex.org/W2114922831","https://openalex.org/W2115358726","https://openalex.org/W2125055259","https://openalex.org/W2125965138","https://openalex.org/W2128904081","https://openalex.org/W2137646016","https://openalex.org/W2139703939","https://openalex.org/W2148115950","https://openalex.org/W2154361640","https://openalex.org/W2157132621","https://openalex.org/W2169690625","https://openalex.org/W2170828133","https://openalex.org/W2171802582","https://openalex.org/W4253904398","https://openalex.org/W6601692866","https://openalex.org/W6630229783"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W125190552","https://openalex.org/W2997511728","https://openalex.org/W4214653893","https://openalex.org/W2149097950","https://openalex.org/W2505282017","https://openalex.org/W3124731355","https://openalex.org/W3036853918","https://openalex.org/W3211372245","https://openalex.org/W3013263334"],"abstract_inverted_index":{"In":[0],"this":[1,35,87,124,132],"paper":[2],"we":[3,89],"present":[4],"a":[5],"comparative":[6],"study":[7,36,88],"among":[8],"well":[9],"established":[10],"data":[11],"mining":[12],"algorithm":[13],"(namely":[14],"J48":[15],"and":[16,20,28,44,54,64,77,109],"naive":[17],"Bayes":[18],"tree)":[19],"novel":[21],"machine":[22],"learning":[23],"paradigms":[24],"like":[25],"ant":[26],"miner":[27],"gene":[29,65],"expression":[30],"programming.":[31],"The":[32],"aim":[33],"of":[34,46,57,71,84,102],"was":[37],"to":[38,91,127],"discover":[39],"significant":[40],"rules":[41],"discriminating":[42],"ER+":[43],"ER-cases":[45],"breast":[47],"cancer.":[48],"We":[49],"compared":[50],"both":[51],"statistical":[52,62],"accuracy":[53],"biological":[55],"validity":[56],"the":[58,100],"results":[59,113],"using":[60,117],"common":[61],"methods":[63],"ontology.":[66],"Some":[67],"worth":[68],"noting":[69],"characteristics":[70],"these":[72],"systems":[73,95],"have":[74],"been":[75],"observed":[76],"analysed":[78],"even":[79],"giving":[80],"some":[81],"possible":[82],"interpretations":[83],"findings.":[85],"With":[86],"tried":[90],"show":[92],"how":[93,110],"intelligent":[94],"can":[96,114],"be":[97,115],"employed":[98],"in":[99,105,131],"design":[101],"experimental":[103],"pipeline":[104],"disease":[106],"processes":[107],"investigation":[108],"deriving":[111],"high-throughput":[112],"validated":[116],"new":[118,129],"computational":[119],"tools.":[120],"Results":[121],"returned":[122],"by":[123],"approach":[125],"seem":[126],"encourage":[128],"efforts":[130],"field":[133]},"counts_by_year":[{"year":2019,"cited_by_count":4},{"year":2018,"cited_by_count":5},{"year":2017,"cited_by_count":6},{"year":2016,"cited_by_count":2},{"year":2015,"cited_by_count":2},{"year":2012,"cited_by_count":1}],"updated_date":"2026-07-29T14:22:42.915294","created_date":"2025-10-10T00:00:00"}
