{"id":"https://openalex.org/W2913644380","doi":"https://doi.org/10.1109/cdc.2018.8618943","title":"Control-theoretic methods for biological networks","display_name":"Control-theoretic methods for biological networks","publication_year":2018,"publication_date":"2018-12-01","ids":{"openalex":"https://openalex.org/W2913644380","doi":"https://doi.org/10.1109/cdc.2018.8618943","mag":"2913644380"},"language":"en","primary_location":{"id":"doi:10.1109/cdc.2018.8618943","is_oa":false,"landing_page_url":"https://doi.org/10.1109/cdc.2018.8618943","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2018 IEEE Conference on Decision and Control (CDC)","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5054472321","display_name":"Franco Blanchini","orcid":"https://orcid.org/0000-0002-4109-5531"},"institutions":[{"id":"https://openalex.org/I129043915","display_name":"University of Udine","ror":"https://ror.org/05ht0mh31","country_code":"IT","type":"education","lineage":["https://openalex.org/I129043915"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Franco Blanchini","raw_affiliation_strings":["Dipartimento di Scienze Matematiche, Informatiche e Fisiche, Universita degli Studi di Udine, Udine, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Dipartimento di Scienze Matematiche, Informatiche e Fisiche, Universita degli Studi di Udine, Udine, Italy","institution_ids":["https://openalex.org/I129043915"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5053033605","display_name":"Hana EI-Samad","orcid":null},"institutions":[{"id":"https://openalex.org/I180670191","display_name":"University of California, San Francisco","ror":"https://ror.org/043mz5j54","country_code":"US","type":"education","lineage":["https://openalex.org/I180670191"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Hana EI-Samad","raw_affiliation_strings":["Department of Biochemistry and Biophysics, University of California San Francisco, San Francisco, CA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biochemistry and Biophysics, University of California San Francisco, San Francisco, CA, USA","institution_ids":["https://openalex.org/I180670191"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5081090445","display_name":"Giulia Giordano","orcid":"https://orcid.org/0000-0002-8600-1738"},"institutions":[{"id":"https://openalex.org/I98358874","display_name":"Delft University of Technology","ror":"https://ror.org/02e2c7k09","country_code":"NL","type":"education","lineage":["https://openalex.org/I98358874"]}],"countries":["NL"],"is_corresponding":false,"raw_author_name":"Giulia Giordano","raw_affiliation_strings":["Delft Center for Systems and Control, Delft University of Technology, Delft, CD, The Netherlands"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Delft Center for Systems and Control, Delft University of Technology, Delft, CD, The Netherlands","institution_ids":["https://openalex.org/I98358874"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5068753451","display_name":"Eduardo D. Sontag","orcid":"https://orcid.org/0000-0001-8020-5783"},"institutions":[{"id":"https://openalex.org/I12912129","display_name":"Northeastern University","ror":"https://ror.org/04t5xt781","country_code":"US","type":"education","lineage":["https://openalex.org/I12912129"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Eduardo D. Sontag","raw_affiliation_strings":["Department of Bioengineering and Department of Electrical and Computer Engineering, Northeastern University, Boston, MA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Bioengineering and Department of Electrical and Computer Engineering, Northeastern University, Boston, MA, USA","institution_ids":["https://openalex.org/I12912129"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":4,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":10.3335,"has_fulltext":false,"cited_by_count":18,"citation_normalized_percentile":{"value":0.98406736,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":null,"issue":null,"first_page":"466","last_page":"483"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.9876000285148621,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9801999926567078,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/robustness","display_name":"Robustness (evolution)","score":0.6853580474853516},{"id":"https://openalex.org/keywords/biological-network","display_name":"Biological network","score":0.6495649814605713},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6345837712287903},{"id":"https://openalex.org/keywords/feedback-control","display_name":"Feedback control","score":0.5791977047920227},{"id":"https://openalex.org/keywords/systems-biology","display_name":"Systems biology","score":0.5253564715385437},{"id":"https://openalex.org/keywords/biological-cell","display_name":"Biological cell","score":0.5053179860115051},{"id":"https://openalex.org/keywords/control","display_name":"Control (management)","score":0.4659354090690613},{"id":"https://openalex.org/keywords/stability","display_name":"Stability (learning theory)","score":0.42257562279701233},{"id":"https://openalex.org/keywords/control-system","display_name":"Control system","score":0.4118995666503906},{"id":"https://openalex.org/keywords/control-engineering","display_name":"Control engineering","score":0.32961446046829224},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.21465188264846802},{"id":"https://openalex.org/keywords/biochemical-engineering","display_name":"Biochemical engineering","score":0.19954004883766174},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.16789308190345764},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.14885902404785156},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.13746115565299988},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.10112264752388}],"concepts":[{"id":"https://openalex.org/C63479239","wikidata":"https://www.wikidata.org/wiki/Q7353546","display_name":"Robustness (evolution)","level":3,"score":0.6853580474853516},{"id":"https://openalex.org/C28225019","wikidata":"https://www.wikidata.org/wiki/Q4915005","display_name":"Biological network","level":2,"score":0.6495649814605713},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6345837712287903},{"id":"https://openalex.org/C3018651601","wikidata":"https://www.wikidata.org/wiki/Q183635","display_name":"Feedback control","level":2,"score":0.5791977047920227},{"id":"https://openalex.org/C152662350","wikidata":"https://www.wikidata.org/wiki/Q815297","display_name":"Systems biology","level":2,"score":0.5253564715385437},{"id":"https://openalex.org/C2983013280","wikidata":"https://www.wikidata.org/wiki/Q7868","display_name":"Biological cell","level":2,"score":0.5053179860115051},{"id":"https://openalex.org/C2775924081","wikidata":"https://www.wikidata.org/wiki/Q55608371","display_name":"Control (management)","level":2,"score":0.4659354090690613},{"id":"https://openalex.org/C112972136","wikidata":"https://www.wikidata.org/wiki/Q7595718","display_name":"Stability (learning theory)","level":2,"score":0.42257562279701233},{"id":"https://openalex.org/C17500928","wikidata":"https://www.wikidata.org/wiki/Q959968","display_name":"Control system","level":2,"score":0.4118995666503906},{"id":"https://openalex.org/C133731056","wikidata":"https://www.wikidata.org/wiki/Q4917288","display_name":"Control engineering","level":1,"score":0.32961446046829224},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.21465188264846802},{"id":"https://openalex.org/C183696295","wikidata":"https://www.wikidata.org/wiki/Q2487696","display_name":"Biochemical engineering","level":1,"score":0.19954004883766174},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.16789308190345764},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.14885902404785156},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.13746115565299988},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.10112264752388},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C119599485","wikidata":"https://www.wikidata.org/wiki/Q43035","display_name":"Electrical engineering","level":1,"score":0.0}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.1109/cdc.2018.8618943","is_oa":false,"landing_page_url":"https://doi.org/10.1109/cdc.2018.8618943","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2018 IEEE Conference on Decision and Control (CDC)","raw_type":"proceedings-article"},{"id":"pmh:oai:air.uniud.it:11390/1146513","is_oa":false,"landing_page_url":"http://hdl.handle.net/11390/1146513","pdf_url":null,"source":{"id":"https://openalex.org/S4306401163","display_name":"Institutional Research Information System (University of Udine)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I129043915","host_organization_name":"University of Udine","host_organization_lineage":["https://openalex.org/I129043915"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"info:eu-repo/semantics/conferenceObject"},{"id":"pmh:oai:iris.unitn.it:11572/249882","is_oa":false,"landing_page_url":"http://hdl.handle.net/11572/249882","pdf_url":null,"source":{"id":"https://openalex.org/S4306401913","display_name":"Institutional Research Information System (Universit\u00e0 degli Studi di Trento)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I193223587","host_organization_name":"University of Trento","host_organization_lineage":["https://openalex.org/I193223587"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/conferenceObject"},{"id":"pmh:oai:tudelft.nl:uuid:a3e192e7-d42f-4cd1-9170-73d0cb31d149","is_oa":false,"landing_page_url":"http://resolver.tudelft.nl/uuid:a3e192e7-d42f-4cd1-9170-73d0cb31d149","pdf_url":null,"source":{"id":"https://openalex.org/S4306400906","display_name":"Research Repository (Delft University of Technology)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I98358874","host_organization_name":"Delft University of Technology","host_organization_lineage":["https://openalex.org/I98358874"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"conference paper"}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/16","display_name":"Peace, Justice and strong institutions","score":0.5400000214576721},{"id":"https://metadata.un.org/sdg/10","display_name":"Reduced inequalities","score":0.46000000834465027}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":108,"referenced_works":["https://openalex.org/W67322803","https://openalex.org/W114979488","https://openalex.org/W130245595","https://openalex.org/W240844920","https://openalex.org/W353076664","https://openalex.org/W645177025","https://openalex.org/W843405416","https://openalex.org/W897674100","https://openalex.org/W1484739396","https://openalex.org/W1491267144","https://openalex.org/W1549251788","https://openalex.org/W1575783483","https://openalex.org/W1587662245","https://openalex.org/W1599969036","https://openalex.org/W1607684789","https://openalex.org/W1629051378","https://openalex.org/W1637936532","https://openalex.org/W1702807065","https://openalex.org/W1850618887","https://openalex.org/W1851248039","https://openalex.org/W1880805667","https://openalex.org/W1953863407","https://openalex.org/W1963691549","https://openalex.org/W1970321745","https://openalex.org/W1971023242","https://openalex.org/W1974336206","https://openalex.org/W1975686246","https://openalex.org/W1978486653","https://openalex.org/W1979833590","https://openalex.org/W1980077650","https://openalex.org/W1981995596","https://openalex.org/W1983722334","https://openalex.org/W1984817899","https://openalex.org/W1985579600","https://openalex.org/W1985795125","https://openalex.org/W1987198995","https://openalex.org/W1997682553","https://openalex.org/W2000296764","https://openalex.org/W2010893185","https://openalex.org/W2014654602","https://openalex.org/W2015745168","https://openalex.org/W2016382979","https://openalex.org/W2017932779","https://openalex.org/W2023061016","https://openalex.org/W2023363172","https://openalex.org/W2030505644","https://openalex.org/W2030740572","https://openalex.org/W2030764181","https://openalex.org/W2030945597","https://openalex.org/W2036546758","https://openalex.org/W2041594648","https://openalex.org/W2044760528","https://openalex.org/W2046649943","https://openalex.org/W2047365291","https://openalex.org/W2058221907","https://openalex.org/W2058473414","https://openalex.org/W2061425021","https://openalex.org/W2063268016","https://openalex.org/W2065207199","https://openalex.org/W2066718612","https://openalex.org/W2074759798","https://openalex.org/W2076678051","https://openalex.org/W2077745478","https://openalex.org/W2082679953","https://openalex.org/W2086298643","https://openalex.org/W2093070837","https://openalex.org/W2093263026","https://openalex.org/W2094781369","https://openalex.org/W2097755389","https://openalex.org/W2098199730","https://openalex.org/W2098974515","https://openalex.org/W2117056464","https://openalex.org/W2118331730","https://openalex.org/W2126596902","https://openalex.org/W2133254839","https://openalex.org/W2133403209","https://openalex.org/W2134408956","https://openalex.org/W2147741970","https://openalex.org/W2157737080","https://openalex.org/W2160170449","https://openalex.org/W2164741971","https://openalex.org/W2166499263","https://openalex.org/W2169623616","https://openalex.org/W2169896356","https://openalex.org/W2170237364","https://openalex.org/W2186962916","https://openalex.org/W2209489473","https://openalex.org/W2247294682","https://openalex.org/W2277751768","https://openalex.org/W2414036001","https://openalex.org/W2495442861","https://openalex.org/W2502908839","https://openalex.org/W2528271650","https://openalex.org/W2745839206","https://openalex.org/W2750346291","https://openalex.org/W2758156712","https://openalex.org/W2964163153","https://openalex.org/W2964175275","https://openalex.org/W3102138651","https://openalex.org/W3104629153","https://openalex.org/W4211017114","https://openalex.org/W4211232706","https://openalex.org/W4231039456","https://openalex.org/W4234683275","https://openalex.org/W4252292900","https://openalex.org/W4285719527","https://openalex.org/W4300672336","https://openalex.org/W6812250624"],"related_works":["https://openalex.org/W2158714033","https://openalex.org/W3213185671","https://openalex.org/W4210989272","https://openalex.org/W4386628104","https://openalex.org/W4206945140","https://openalex.org/W2300879143","https://openalex.org/W2509687359","https://openalex.org/W4212865750","https://openalex.org/W2362023034","https://openalex.org/W78967844"],"abstract_inverted_index":{"Feedback":[0],"is":[1,123,155],"both":[2],"a":[3,9,45],"pillar":[4],"of":[5,12,26,55,67,71,86,135,168,201],"control":[6,69],"theory":[7],"and":[8,29,70,96,98,117,131,171],"pervasive":[10],"principle":[11],"nature.":[13],"For":[14],"this":[15],"reason,":[16],"control-theoretic":[17,56,82,144],"methods":[18,57],"are":[19,150,204],"powerful":[20],"to":[21,37,108,126,139,198],"analyse":[22],"the":[23,53,72,84,91,106,110,133,187,199],"dynamic":[24],"behaviour":[25],"biological":[27,39,59,68,136,180,202],"systems":[28,40,148,163,203],"mathematically":[30],"explain":[31],"their":[32,140],"properties,":[33],"as":[34,36,114,174,176],"well":[35,175],"engineer":[38],"so":[41],"that":[42,191],"they":[43],"perform":[44],"specific":[46],"task":[47],"by":[48,185],"design.":[49],"This":[50],"paper":[51],"illustrates":[52],"relevance":[54],"for":[58,159],"systems.":[60],"The":[61,120,152],"first":[62],"part":[63,122,154],"gives":[64],"an":[65],"overview":[66],"versatile":[73],"ways":[74],"in":[75,90,105,129,147,162,193],"which":[76],"cells":[77],"use":[78],"feedback.":[79],"By":[80],"employing":[81],"methods,":[83],"complexity":[85],"interlaced":[87],"feedback":[88,100,172],"loops":[89,101],"cell":[92,107],"can":[93,102,182],"be":[94,103,183],"revealed":[95],"explained,":[97],"layered":[99],"designed":[104],"induce":[109],"desired":[111],"behaviours,":[112],"such":[113],"oscillations,":[115],"multi-stability":[116],"activity":[118],"regulation.":[119],"second":[121],"mainly":[124],"devoted":[125],"modelling":[127],"uncertainty":[128],"biology":[130,149],"understanding":[132,167],"robustness":[134],"phenomena":[137],"due":[138],"inherent":[141],"structure.":[142],"Important":[143],"tools":[145,158],"used":[146],"surveyed.":[151],"third":[153],"focused":[156],"on":[157,179],"model":[160],"discrimination":[161],"biology.":[164],"A":[165],"deeper":[166],"molecular":[169],"pathways":[170],"loops,":[173],"qualitative":[177],"information":[178],"networks,":[181],"achieved":[184],"studying":[186],"\u201cdynamic":[188],"response":[189],"phenotypes\u201d":[190],"appear":[192],"temporal":[194],"responses.":[195],"Several":[196],"applications":[197],"analysis":[200],"showcased.":[205]},"counts_by_year":[{"year":2025,"cited_by_count":4},{"year":2024,"cited_by_count":2},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":3},{"year":2020,"cited_by_count":6},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":1}],"updated_date":"2026-07-29T14:22:42.915294","created_date":"2019-02-21T00:00:00"}
