{"id":"https://openalex.org/W2568942351","doi":"https://doi.org/10.1109/cdc.2016.7798775","title":"Quantifying resource competition and its effects in the TX-TL system","display_name":"Quantifying resource competition and its effects in the TX-TL system","publication_year":2016,"publication_date":"2016-12-01","ids":{"openalex":"https://openalex.org/W2568942351","doi":"https://doi.org/10.1109/cdc.2016.7798775","mag":"2568942351"},"language":"en","primary_location":{"id":"doi:10.1109/cdc.2016.7798775","is_oa":false,"landing_page_url":"https://doi.org/10.1109/cdc.2016.7798775","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2016 IEEE 55th Conference on Decision and Control (CDC)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5002692025","display_name":"Andr\u00e1s Gy\u00f6rgy","orcid":"https://orcid.org/0000-0001-8103-260X"},"institutions":[{"id":"https://openalex.org/I95457486","display_name":"University of California, Berkeley","ror":"https://ror.org/01an7q238","country_code":"US","type":"education","lineage":["https://openalex.org/I95457486"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Andras Gyorgy","raw_affiliation_strings":["Department of Electrical Engineering and Computer Science, University of California, Berkeley, CA, USA"],"affiliations":[{"raw_affiliation_string":"Department of Electrical Engineering and Computer Science, University of California, Berkeley, CA, USA","institution_ids":["https://openalex.org/I95457486"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5068600217","display_name":"Richard M. Murray","orcid":"https://orcid.org/0000-0002-5785-7481"},"institutions":[{"id":"https://openalex.org/I95457486","display_name":"University of California, Berkeley","ror":"https://ror.org/01an7q238","country_code":"US","type":"education","lineage":["https://openalex.org/I95457486"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Richard M. Murray","raw_affiliation_strings":["Department of Electrical Engineering and Computer Science, University of California, Berkeley, CA, USA"],"affiliations":[{"raw_affiliation_string":"Department of Electrical Engineering and Computer Science, University of California, Berkeley, CA, USA","institution_ids":["https://openalex.org/I95457486"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5002692025"],"corresponding_institution_ids":["https://openalex.org/I95457486"],"apc_list":null,"apc_paid":null,"fwci":1.7431,"has_fulltext":false,"cited_by_count":34,"citation_normalized_percentile":{"value":0.85462555,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":null,"issue":null,"first_page":"3363","last_page":"3368"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10878","display_name":"CRISPR and Genetic Engineering","score":0.9878000020980835,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11178","display_name":"Receptor Mechanisms and Signaling","score":0.9861999750137329,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6776536107063293},{"id":"https://openalex.org/keywords/resource","display_name":"Resource (disambiguation)","score":0.6650875210762024},{"id":"https://openalex.org/keywords/competition","display_name":"Competition (biology)","score":0.6329391002655029},{"id":"https://openalex.org/keywords/interpretation","display_name":"Interpretation (philosophy)","score":0.49788427352905273},{"id":"https://openalex.org/keywords/expression","display_name":"Expression (computer science)","score":0.4755170941352844},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.43577584624290466},{"id":"https://openalex.org/keywords/distributed-computing","display_name":"Distributed computing","score":0.3829634487628937},{"id":"https://openalex.org/keywords/biological-system","display_name":"Biological system","score":0.34159260988235474},{"id":"https://openalex.org/keywords/ecology","display_name":"Ecology","score":0.16463327407836914},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.11784303188323975},{"id":"https://openalex.org/keywords/computer-network","display_name":"Computer network","score":0.10254096984863281}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6776536107063293},{"id":"https://openalex.org/C206345919","wikidata":"https://www.wikidata.org/wiki/Q20380951","display_name":"Resource (disambiguation)","level":2,"score":0.6650875210762024},{"id":"https://openalex.org/C91306197","wikidata":"https://www.wikidata.org/wiki/Q45767","display_name":"Competition (biology)","level":2,"score":0.6329391002655029},{"id":"https://openalex.org/C527412718","wikidata":"https://www.wikidata.org/wiki/Q855395","display_name":"Interpretation (philosophy)","level":2,"score":0.49788427352905273},{"id":"https://openalex.org/C90559484","wikidata":"https://www.wikidata.org/wiki/Q778379","display_name":"Expression (computer science)","level":2,"score":0.4755170941352844},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.43577584624290466},{"id":"https://openalex.org/C120314980","wikidata":"https://www.wikidata.org/wiki/Q180634","display_name":"Distributed computing","level":1,"score":0.3829634487628937},{"id":"https://openalex.org/C186060115","wikidata":"https://www.wikidata.org/wiki/Q30336093","display_name":"Biological system","level":1,"score":0.34159260988235474},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.16463327407836914},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.11784303188323975},{"id":"https://openalex.org/C31258907","wikidata":"https://www.wikidata.org/wiki/Q1301371","display_name":"Computer network","level":1,"score":0.10254096984863281},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1109/cdc.2016.7798775","is_oa":false,"landing_page_url":"https://doi.org/10.1109/cdc.2016.7798775","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2016 IEEE 55th Conference on Decision and Control (CDC)","raw_type":"proceedings-article"},{"id":"pmh:oai:authors.library.caltech.edu:73447","is_oa":false,"landing_page_url":"https://resolver.caltech.edu/CaltechAUTHORS:20170111-150445053","pdf_url":null,"source":{"id":"https://openalex.org/S4306402161","display_name":"CaltechAUTHORS (California Institute of Technology)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I122411786","host_organization_name":"California Institute of Technology","host_organization_lineage":["https://openalex.org/I122411786"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Book Section"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320332162","display_name":"Centers for Disease Control and Prevention","ror":"https://ror.org/042twtr12"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":25,"referenced_works":["https://openalex.org/W1482637285","https://openalex.org/W1573819411","https://openalex.org/W1599969036","https://openalex.org/W1606784130","https://openalex.org/W1621540022","https://openalex.org/W1621921871","https://openalex.org/W1963204303","https://openalex.org/W1966645118","https://openalex.org/W1967635084","https://openalex.org/W1971548821","https://openalex.org/W1976865287","https://openalex.org/W1985161570","https://openalex.org/W2003847712","https://openalex.org/W2041179087","https://openalex.org/W2057001025","https://openalex.org/W2060603511","https://openalex.org/W2099705545","https://openalex.org/W2121806138","https://openalex.org/W2129149800","https://openalex.org/W2131135346","https://openalex.org/W2132724170","https://openalex.org/W2134759932","https://openalex.org/W2166499263","https://openalex.org/W2177943983","https://openalex.org/W2186962916"],"related_works":["https://openalex.org/W1965495149","https://openalex.org/W1571046024","https://openalex.org/W1596201972","https://openalex.org/W2160425906","https://openalex.org/W1485627940","https://openalex.org/W2152433827","https://openalex.org/W1986253068","https://openalex.org/W2385146268","https://openalex.org/W1598943142","https://openalex.org/W4313054100"],"abstract_inverted_index":{"Without":[0],"accounting":[1,108],"for":[2,40,109],"the":[3,10,48,73,91,118],"limited":[4],"availability":[5],"of":[6,13,34,58,75],"shared":[7,83],"cellular":[8],"resources,":[9],"standard":[11],"model":[12,33,52],"gene":[14,35],"expression":[15,36],"fails":[16],"to":[17,45,96],"reliably":[18],"predict":[19],"experimental":[20,49],"data":[21],"obtained":[22],"in":[23,101,114],"vitro.":[24],"To":[25],"overcome":[26],"this":[27,51,68],"limitation,":[28],"we":[29,70,88,105],"develop":[30],"a":[31,56],"dynamical":[32],"explicitly":[37],"modeling":[38],"competition":[39],"scarce":[41],"resources.":[42,84],"In":[43],"addition":[44],"accurately":[46],"describing":[47],"data,":[50],"only":[53],"depends":[54],"on":[55,67],"handful":[57],"easily":[59],"identifiable":[60],"parameters":[61],"with":[62,82],"clear":[63],"physical":[64],"interpretation.":[65],"Based":[66],"model,":[69],"then":[71],"characterize":[72],"combinations":[74],"protein":[76],"concentrations":[77],"that":[78,107],"are":[79],"simultaneously":[80],"realizable":[81],"As":[85],"application":[86],"examples,":[87],"demonstrate":[89],"how":[90],"results":[92],"can":[93],"be":[94],"used":[95],"explain":[97],"similarities/differences":[98],"among":[99],"different":[100],"vitro":[102],"extracts,":[103],"furthermore,":[104],"illustrate":[106],"resource":[110],"usage":[111],"is":[112],"essential":[113],"circuit":[115],"design":[116],"considering":[117],"toggle":[119],"switch.":[120]},"counts_by_year":[{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":4},{"year":2022,"cited_by_count":3},{"year":2021,"cited_by_count":4},{"year":2020,"cited_by_count":10},{"year":2019,"cited_by_count":5},{"year":2018,"cited_by_count":5}],"updated_date":"2026-04-04T16:13:02.066488","created_date":"2025-10-10T00:00:00"}
