{"id":"https://openalex.org/W2037312885","doi":"https://doi.org/10.1109/ccgrid.2005.1558554","title":"A semantic grid-based data access and integration service for bioinformatics","display_name":"A semantic grid-based data access and integration service for bioinformatics","publication_year":2005,"publication_date":"2005-01-01","ids":{"openalex":"https://openalex.org/W2037312885","doi":"https://doi.org/10.1109/ccgrid.2005.1558554","mag":"2037312885"},"language":"en","primary_location":{"id":"doi:10.1109/ccgrid.2005.1558554","is_oa":false,"landing_page_url":"https://doi.org/10.1109/ccgrid.2005.1558554","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"CCGrid 2005. IEEE International Symposium on Cluster Computing and the Grid, 2005.","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5068232148","display_name":"Giovanni Aloisio","orcid":"https://orcid.org/0000-0001-5902-6983"},"institutions":[{"id":"https://openalex.org/I4210095193","display_name":"Istituto Nazionale di Fisica Nucleare, Sezione di Lecce","ror":"https://ror.org/00qrf6g60","country_code":"IT","type":"facility","lineage":["https://openalex.org/I160013858","https://openalex.org/I4210095193"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"G. Aloisio","raw_affiliation_strings":["ISUFI/CA CT, University of Lecce, NNL/INFM and CNR, Italy","ISUFI/CACT, Lecce, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"ISUFI/CA CT, University of Lecce, NNL/INFM and CNR, Italy","institution_ids":["https://openalex.org/I4210095193"]},{"raw_affiliation_string":"ISUFI/CACT, Lecce, Italy","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5077589329","display_name":"Massimo Cafaro","orcid":"https://orcid.org/0000-0003-1118-7109"},"institutions":[{"id":"https://openalex.org/I4210095193","display_name":"Istituto Nazionale di Fisica Nucleare, Sezione di Lecce","ror":"https://ror.org/00qrf6g60","country_code":"IT","type":"facility","lineage":["https://openalex.org/I160013858","https://openalex.org/I4210095193"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"M. Cafaro","raw_affiliation_strings":["ISUFI/CA CT, University of Lecce, NNL/INFM and CNR, Italy","ISUFI/CACT, Lecce, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"ISUFI/CA CT, University of Lecce, NNL/INFM and CNR, Italy","institution_ids":["https://openalex.org/I4210095193"]},{"raw_affiliation_string":"ISUFI/CACT, Lecce, Italy","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5079559754","display_name":"Italo Epicoco","orcid":"https://orcid.org/0000-0002-6408-1335"},"institutions":[{"id":"https://openalex.org/I4210095193","display_name":"Istituto Nazionale di Fisica Nucleare, Sezione di Lecce","ror":"https://ror.org/00qrf6g60","country_code":"IT","type":"facility","lineage":["https://openalex.org/I160013858","https://openalex.org/I4210095193"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"I. Epicoco","raw_affiliation_strings":["ISUFI/CA CT, University of Lecce, NNL/INFM and CNR, Italy","ISUFI/CACT, Lecce, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"ISUFI/CA CT, University of Lecce, NNL/INFM and CNR, Italy","institution_ids":["https://openalex.org/I4210095193"]},{"raw_affiliation_string":"ISUFI/CACT, Lecce, Italy","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5022160194","display_name":"Sandro Fiore","orcid":"https://orcid.org/0000-0002-8430-6087"},"institutions":[{"id":"https://openalex.org/I4210095193","display_name":"Istituto Nazionale di Fisica Nucleare, Sezione di Lecce","ror":"https://ror.org/00qrf6g60","country_code":"IT","type":"facility","lineage":["https://openalex.org/I160013858","https://openalex.org/I4210095193"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"S. Fiore","raw_affiliation_strings":["ISUFI/CA CT, University of Lecce, NNL/INFM and CNR, Italy","ISUFI/CACT, Lecce, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"ISUFI/CA CT, University of Lecce, NNL/INFM and CNR, Italy","institution_ids":["https://openalex.org/I4210095193"]},{"raw_affiliation_string":"ISUFI/CACT, Lecce, Italy","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5052404540","display_name":"Maria Mirto","orcid":"https://orcid.org/0000-0001-9366-3169"},"institutions":[{"id":"https://openalex.org/I4210095193","display_name":"Istituto Nazionale di Fisica Nucleare, Sezione di Lecce","ror":"https://ror.org/00qrf6g60","country_code":"IT","type":"facility","lineage":["https://openalex.org/I160013858","https://openalex.org/I4210095193"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"M. Mirto","raw_affiliation_strings":["ISUFI/CA CT, University of Lecce, NNL/INFM and CNR, Italy","ISUFI/CACT, Lecce, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"ISUFI/CA CT, University of Lecce, NNL/INFM and CNR, Italy","institution_ids":["https://openalex.org/I4210095193"]},{"raw_affiliation_string":"ISUFI/CACT, Lecce, Italy","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I4210095193"],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":2,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"196","last_page":"203 Vol. 1"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10715","display_name":"Distributed and Parallel Computing Systems","score":0.9990000128746033,"subfield":{"id":"https://openalex.org/subfields/1705","display_name":"Computer Networks and Communications"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10715","display_name":"Distributed and Parallel Computing Systems","score":0.9990000128746033,"subfield":{"id":"https://openalex.org/subfields/1705","display_name":"Computer Networks and Communications"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9944999814033508,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9830999970436096,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8029872179031372},{"id":"https://openalex.org/keywords/workflow","display_name":"Workflow","score":0.7430553436279297},{"id":"https://openalex.org/keywords/web-service","display_name":"Web service","score":0.6090685129165649},{"id":"https://openalex.org/keywords/data-integration","display_name":"Data integration","score":0.5582952499389648},{"id":"https://openalex.org/keywords/grid","display_name":"Grid","score":0.5543587803840637},{"id":"https://openalex.org/keywords/grid-computing","display_name":"Grid computing","score":0.5470777153968811},{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.5414474606513977},{"id":"https://openalex.org/keywords/service","display_name":"Service (business)","score":0.5093830823898315},{"id":"https://openalex.org/keywords/component","display_name":"Component (thermodynamics)","score":0.504447340965271},{"id":"https://openalex.org/keywords/biological-database","display_name":"Biological database","score":0.4988133907318115},{"id":"https://openalex.org/keywords/semantic-grid","display_name":"Semantic grid","score":0.46535971760749817},{"id":"https://openalex.org/keywords/data-access","display_name":"Data access","score":0.4579038619995117},{"id":"https://openalex.org/keywords/ontology","display_name":"Ontology","score":0.4532608985900879},{"id":"https://openalex.org/keywords/semantic-web","display_name":"Semantic Web","score":0.44697463512420654},{"id":"https://openalex.org/keywords/data-visualization","display_name":"Data visualization","score":0.4373306334018707},{"id":"https://openalex.org/keywords/biological-data","display_name":"Biological data","score":0.4356178045272827},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.42495909333229065},{"id":"https://openalex.org/keywords/data-grid","display_name":"Data grid","score":0.4197441041469574},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.32539641857147217},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.31595438718795776},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.24513989686965942}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8029872179031372},{"id":"https://openalex.org/C177212765","wikidata":"https://www.wikidata.org/wiki/Q627335","display_name":"Workflow","level":2,"score":0.7430553436279297},{"id":"https://openalex.org/C35578498","wikidata":"https://www.wikidata.org/wiki/Q193424","display_name":"Web service","level":2,"score":0.6090685129165649},{"id":"https://openalex.org/C72634772","wikidata":"https://www.wikidata.org/wiki/Q386824","display_name":"Data integration","level":2,"score":0.5582952499389648},{"id":"https://openalex.org/C187691185","wikidata":"https://www.wikidata.org/wiki/Q2020720","display_name":"Grid","level":2,"score":0.5543587803840637},{"id":"https://openalex.org/C70429105","wikidata":"https://www.wikidata.org/wiki/Q249999","display_name":"Grid computing","level":3,"score":0.5470777153968811},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.5414474606513977},{"id":"https://openalex.org/C2780378061","wikidata":"https://www.wikidata.org/wiki/Q25351891","display_name":"Service (business)","level":2,"score":0.5093830823898315},{"id":"https://openalex.org/C168167062","wikidata":"https://www.wikidata.org/wiki/Q1117970","display_name":"Component (thermodynamics)","level":2,"score":0.504447340965271},{"id":"https://openalex.org/C20901353","wikidata":"https://www.wikidata.org/wiki/Q4117139","display_name":"Biological database","level":2,"score":0.4988133907318115},{"id":"https://openalex.org/C103692084","wikidata":"https://www.wikidata.org/wiki/Q1765824","display_name":"Semantic grid","level":3,"score":0.46535971760749817},{"id":"https://openalex.org/C47487241","wikidata":"https://www.wikidata.org/wiki/Q5227230","display_name":"Data access","level":2,"score":0.4579038619995117},{"id":"https://openalex.org/C25810664","wikidata":"https://www.wikidata.org/wiki/Q44325","display_name":"Ontology","level":2,"score":0.4532608985900879},{"id":"https://openalex.org/C2129575","wikidata":"https://www.wikidata.org/wiki/Q54837","display_name":"Semantic Web","level":2,"score":0.44697463512420654},{"id":"https://openalex.org/C172367668","wikidata":"https://www.wikidata.org/wiki/Q6504956","display_name":"Data visualization","level":3,"score":0.4373306334018707},{"id":"https://openalex.org/C201797286","wikidata":"https://www.wikidata.org/wiki/Q4914986","display_name":"Biological data","level":2,"score":0.4356178045272827},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.42495909333229065},{"id":"https://openalex.org/C147639290","wikidata":"https://www.wikidata.org/wiki/Q56369138","display_name":"Data grid","level":4,"score":0.4197441041469574},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.32539641857147217},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.31595438718795776},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.24513989686965942},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0},{"id":"https://openalex.org/C136264566","wikidata":"https://www.wikidata.org/wiki/Q159810","display_name":"Economy","level":1,"score":0.0},{"id":"https://openalex.org/C97355855","wikidata":"https://www.wikidata.org/wiki/Q11473","display_name":"Thermodynamics","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C2524010","wikidata":"https://www.wikidata.org/wiki/Q8087","display_name":"Geometry","level":1,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.1109/ccgrid.2005.1558554","is_oa":false,"landing_page_url":"https://doi.org/10.1109/ccgrid.2005.1558554","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"CCGrid 2005. IEEE International Symposium on Cluster Computing and the Grid, 2005.","raw_type":"proceedings-article"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.910.1594","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.910.1594","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"https://www.researchgate.net/profile/Massimo_Cafaro/publication/220941789_A_semantic_grid-based_data_access_and_integration_service_for_bioinformatics/links/0deec52df5fd39e5a8000000.pdf","raw_type":"text"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.915.7006","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.915.7006","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"https://www.researchgate.net/profile/Massimo_Cafaro/publication/220941789_A_semantic_grid-based_data_access_and_integration_service_for_bioinformatics/links/0deec52df5fd39e5a8000000.pdf?origin%3Dpublication_detail","raw_type":"text"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.93.9347","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.93.9347","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://ftp.informatik.rwth-aachen.de/Publications/CEUR-WS/Vol-138/paper7.pdf","raw_type":"text"}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.550000011920929,"display_name":"Industry, innovation and infrastructure","id":"https://metadata.un.org/sdg/9"}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":28,"referenced_works":["https://openalex.org/W90002972","https://openalex.org/W140129305","https://openalex.org/W258172371","https://openalex.org/W1239375374","https://openalex.org/W1502629466","https://openalex.org/W1542485367","https://openalex.org/W1567971565","https://openalex.org/W1572133045","https://openalex.org/W1966041739","https://openalex.org/W1992673035","https://openalex.org/W1996423252","https://openalex.org/W2026258231","https://openalex.org/W2055043387","https://openalex.org/W2066468520","https://openalex.org/W2091257550","https://openalex.org/W2103017472","https://openalex.org/W2105637701","https://openalex.org/W2108067237","https://openalex.org/W2111996486","https://openalex.org/W2141824507","https://openalex.org/W2148853951","https://openalex.org/W2154646200","https://openalex.org/W2160493209","https://openalex.org/W2160948978","https://openalex.org/W4236236547","https://openalex.org/W4238003946","https://openalex.org/W4240605432","https://openalex.org/W6605726139"],"related_works":["https://openalex.org/W2188979397","https://openalex.org/W1580346733","https://openalex.org/W836263687","https://openalex.org/W2149895487","https://openalex.org/W4381571608","https://openalex.org/W1541285588","https://openalex.org/W2097927520","https://openalex.org/W2021378496","https://openalex.org/W2470010699","https://openalex.org/W2122052575"],"abstract_inverted_index":{"Given":[0],"the":[1,29,33,56,65,103],"heterogeneous":[2,118],"nature":[3],"of":[4,55,69,102,130],"biological":[5,119],"data":[6,21,43,114,120,133],"and":[7,23,67,85,90,113,125],"their":[8],"intensive":[9],"use":[10],"in":[11,14,48],"many":[12],"tools,":[13],"this":[15,49],"paper":[16],"we":[17],"propose":[18],"a":[19,52,59,70,97],"semantic":[20],"access":[22,134],"integration":[24,115],"(DAI)":[25],"service,":[26],"based":[27],"on":[28],"grid":[30],"paradigm,":[31],"for":[32,40,117,136],"bioinformatics":[34,108],"domain.":[35],"This":[36],"service":[37,135],"uses":[38],"ontologies":[39],"correlating":[41],"different":[42],"sets.":[44],"The":[45,99],"DAI":[46,104],"proposed":[47],"work":[50],"is":[51,105,141],"fundamental":[53],"component":[54],"ProGenGrid":[57],"system,":[58],"grid-enabled":[60],"platform,":[61],"which":[62],"aims":[63],"at":[64],"design":[66],"implementation":[68],"virtual":[71],"laboratory":[72],"where":[73],"e-scientists":[74],"could":[75],"simulate":[76],"complex":[77],"\"in":[78],"silico\"":[79],"experiments,":[80],"composing":[81],"some":[82],"popular":[83],"analysis":[84],"visualization":[86],"tools":[87,109],"(e.g.":[88],"Blast":[89],"Rasmol)":[91],"available":[92],"as":[93,123],"Web":[94],"services,":[95],"into":[96],"workflow.":[98],"main":[100],"goal":[101],"to":[106],"provide":[107],"with":[110],"advanced":[111],"functionalities":[112],"services":[116],"banks,":[121],"such":[122],"PDB":[124],"Swiss-Prot.":[126],"A":[127],"case":[128],"study":[129],"our":[131],"specialized":[132],"locating":[137],"similar":[138],"protein":[139],"sequences":[140],"presented.":[142]},"counts_by_year":[{"year":2015,"cited_by_count":1},{"year":2012,"cited_by_count":1}],"updated_date":"2026-07-14T23:27:15.235271","created_date":"2025-10-10T00:00:00"}
