{"id":"https://openalex.org/W3033908039","doi":"https://doi.org/10.1109/cbms49503.2020.00049","title":"iASiS Open Data Graph: Automated Semantic Integration of Disease-Specific Knowledge","display_name":"iASiS Open Data Graph: Automated Semantic Integration of Disease-Specific Knowledge","publication_year":2020,"publication_date":"2020-07-01","ids":{"openalex":"https://openalex.org/W3033908039","doi":"https://doi.org/10.1109/cbms49503.2020.00049","mag":"3033908039"},"language":"en","primary_location":{"id":"doi:10.1109/cbms49503.2020.00049","is_oa":false,"landing_page_url":"https://doi.org/10.1109/cbms49503.2020.00049","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2020 IEEE 33rd International Symposium on Computer-Based Medical Systems (CBMS)","raw_type":"proceedings-article"},"type":"preprint","indexed_in":["arxiv","crossref","datacite"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://arxiv.org/pdf/1912.08633","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5009767506","display_name":"Anastasios Nentidis","orcid":"https://orcid.org/0000-0002-3782-4412"},"institutions":[{"id":"https://openalex.org/I203474044","display_name":"National Centre of Scientific Research \"Demokritos\"","ror":"https://ror.org/038jp4m40","country_code":"GR","type":"facility","lineage":["https://openalex.org/I203474044"]},{"id":"https://openalex.org/I21370196","display_name":"Aristotle University of Thessaloniki","ror":"https://ror.org/02j61yw88","country_code":"GR","type":"education","lineage":["https://openalex.org/I21370196"]},{"id":"https://openalex.org/I4387152169","display_name":"Institute of Informatics & Telecommunications","ror":"https://ror.org/0396t6k89","country_code":null,"type":"facility","lineage":["https://openalex.org/I203474044","https://openalex.org/I4387152169"]}],"countries":["GR"],"is_corresponding":true,"raw_author_name":"Anastasios Nentidis","raw_affiliation_strings":["Institute of Informatics and Telecommunications, NCSR Demokritos, Athens, Greece","School of Informatics, Aristotle University of Thessaloniki, Thessaloniki, Greece","National Centre for Scientific Research Demokritos, Greece & Aristotle University of Thessaloniki, Greece"],"affiliations":[{"raw_affiliation_string":"Institute of Informatics and Telecommunications, NCSR Demokritos, Athens, Greece","institution_ids":["https://openalex.org/I203474044","https://openalex.org/I4387152169"]},{"raw_affiliation_string":"School of Informatics, Aristotle University of Thessaloniki, Thessaloniki, Greece","institution_ids":["https://openalex.org/I21370196"]},{"raw_affiliation_string":"National Centre for Scientific Research Demokritos, Greece & Aristotle University of Thessaloniki, Greece","institution_ids":["https://openalex.org/I203474044","https://openalex.org/I21370196"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5069071383","display_name":"Konstantinos Bougiatiotis","orcid":"https://orcid.org/0000-0002-1910-2758"},"institutions":[{"id":"https://openalex.org/I203474044","display_name":"National Centre of Scientific Research \"Demokritos\"","ror":"https://ror.org/038jp4m40","country_code":"GR","type":"facility","lineage":["https://openalex.org/I203474044"]},{"id":"https://openalex.org/I200777214","display_name":"National and Kapodistrian University of Athens","ror":"https://ror.org/04gnjpq42","country_code":"GR","type":"education","lineage":["https://openalex.org/I200777214"]},{"id":"https://openalex.org/I4387152169","display_name":"Institute of Informatics & Telecommunications","ror":"https://ror.org/0396t6k89","country_code":null,"type":"facility","lineage":["https://openalex.org/I203474044","https://openalex.org/I4387152169"]}],"countries":["GR"],"is_corresponding":false,"raw_author_name":"Konstantinos Bougiatiotis","raw_affiliation_strings":["Department of Informatics and Telecommunications, National and Kapodistrian University of Athens, Athens, Greece","Institute of Informatics and Telecommunications, NCSR Demokritos, Athens, Greece","National Centre for Scientific Research Demokritos, Greece & National and Kapodistrian University of Athens, Greece"],"affiliations":[{"raw_affiliation_string":"Department of Informatics and Telecommunications, National and Kapodistrian University of Athens, Athens, Greece","institution_ids":["https://openalex.org/I200777214"]},{"raw_affiliation_string":"Institute of Informatics and Telecommunications, NCSR Demokritos, Athens, Greece","institution_ids":["https://openalex.org/I203474044","https://openalex.org/I4387152169"]},{"raw_affiliation_string":"National Centre for Scientific Research Demokritos, Greece & National and Kapodistrian University of Athens, Greece","institution_ids":["https://openalex.org/I203474044","https://openalex.org/I200777214"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5058877446","display_name":"Anastasia Krithara","orcid":"https://orcid.org/0000-0003-0491-4507"},"institutions":[{"id":"https://openalex.org/I4387152169","display_name":"Institute of Informatics & Telecommunications","ror":"https://ror.org/0396t6k89","country_code":null,"type":"facility","lineage":["https://openalex.org/I203474044","https://openalex.org/I4387152169"]},{"id":"https://openalex.org/I203474044","display_name":"National Centre of Scientific Research \"Demokritos\"","ror":"https://ror.org/038jp4m40","country_code":"GR","type":"facility","lineage":["https://openalex.org/I203474044"]}],"countries":["GR"],"is_corresponding":false,"raw_author_name":"Anastasia Krithara","raw_affiliation_strings":["Institute of Informatics and Telecommunications, NCSR Demokritos, Athens, Greece","National Centre for Scientific Research Demokritos, Greece"],"affiliations":[{"raw_affiliation_string":"Institute of Informatics and Telecommunications, NCSR Demokritos, Athens, Greece","institution_ids":["https://openalex.org/I203474044","https://openalex.org/I4387152169"]},{"raw_affiliation_string":"National Centre for Scientific Research Demokritos, Greece","institution_ids":["https://openalex.org/I203474044"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5010395244","display_name":"\u0393\u03b5\u03ce\u03c1\u03b3\u03b9\u03bf\u03c2 \u03a0\u03b1\u03bb\u03b9\u03bf\u03cd\u03c1\u03b1\u03c2","orcid":"https://orcid.org/0000-0001-9629-2367"},"institutions":[{"id":"https://openalex.org/I4387152169","display_name":"Institute of Informatics & Telecommunications","ror":"https://ror.org/0396t6k89","country_code":null,"type":"facility","lineage":["https://openalex.org/I203474044","https://openalex.org/I4387152169"]},{"id":"https://openalex.org/I203474044","display_name":"National Centre of Scientific Research \"Demokritos\"","ror":"https://ror.org/038jp4m40","country_code":"GR","type":"facility","lineage":["https://openalex.org/I203474044"]}],"countries":["GR"],"is_corresponding":false,"raw_author_name":"Georgios Paliouras","raw_affiliation_strings":["Institute of Informatics and Telecommunications, NCSR Demokritos, Athens, Greece","National Centre of Scientific Research \u201cDemokritos\u201d"],"affiliations":[{"raw_affiliation_string":"Institute of Informatics and Telecommunications, NCSR Demokritos, Athens, Greece","institution_ids":["https://openalex.org/I203474044","https://openalex.org/I4387152169"]},{"raw_affiliation_string":"National Centre of Scientific Research \u201cDemokritos\u201d","institution_ids":["https://openalex.org/I203474044"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5009767506"],"corresponding_institution_ids":["https://openalex.org/I203474044","https://openalex.org/I21370196","https://openalex.org/I4387152169"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":{"value":0.05232017,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"220","last_page":"225"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9961000084877014,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.9955000281333923,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8204890489578247},{"id":"https://openalex.org/keywords/graph","display_name":"Graph","score":0.5499526858329773},{"id":"https://openalex.org/keywords/reuse","display_name":"Reuse","score":0.4777999520301819},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.4647117853164673},{"id":"https://openalex.org/keywords/knowledge-graph","display_name":"Knowledge graph","score":0.43211206793785095},{"id":"https://openalex.org/keywords/domain-knowledge","display_name":"Domain knowledge","score":0.43135446310043335},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.34711340069770813},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.2784619927406311},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.13513842225074768}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8204890489578247},{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.5499526858329773},{"id":"https://openalex.org/C206588197","wikidata":"https://www.wikidata.org/wiki/Q846574","display_name":"Reuse","level":2,"score":0.4777999520301819},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.4647117853164673},{"id":"https://openalex.org/C2987255567","wikidata":"https://www.wikidata.org/wiki/Q33002955","display_name":"Knowledge graph","level":2,"score":0.43211206793785095},{"id":"https://openalex.org/C207685749","wikidata":"https://www.wikidata.org/wiki/Q2088941","display_name":"Domain knowledge","level":2,"score":0.43135446310043335},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.34711340069770813},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.2784619927406311},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.13513842225074768},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.1109/cbms49503.2020.00049","is_oa":false,"landing_page_url":"https://doi.org/10.1109/cbms49503.2020.00049","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2020 IEEE 33rd International Symposium on Computer-Based Medical Systems (CBMS)","raw_type":"proceedings-article"},{"id":"pmh:oai:arXiv.org:1912.08633","is_oa":true,"landing_page_url":"http://arxiv.org/abs/1912.08633","pdf_url":"https://arxiv.org/pdf/1912.08633","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":null},{"id":"mag:3033908039","is_oa":true,"landing_page_url":"http://export.arxiv.org/pdf/1912.08633","pdf_url":null,"source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"arXiv (Cornell University)","raw_type":null},{"id":"doi:10.48550/arxiv.1912.08633","is_oa":true,"landing_page_url":"https://doi.org/10.48550/arxiv.1912.08633","pdf_url":null,"source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"article"}],"best_oa_location":{"id":"pmh:oai:arXiv.org:1912.08633","is_oa":true,"landing_page_url":"http://arxiv.org/abs/1912.08633","pdf_url":"https://arxiv.org/pdf/1912.08633","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":null},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320332999","display_name":"Horizon 2020 Framework Programme","ror":"https://ror.org/00k4n6c32"}],"has_content":{"grobid_xml":false,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3033908039.pdf"},"referenced_works_count":25,"referenced_works":["https://openalex.org/W138612281","https://openalex.org/W1538085078","https://openalex.org/W1550258693","https://openalex.org/W2009313526","https://openalex.org/W2033237963","https://openalex.org/W2098201295","https://openalex.org/W2103017472","https://openalex.org/W2108798001","https://openalex.org/W2117446654","https://openalex.org/W2157272674","https://openalex.org/W2159092541","https://openalex.org/W2159583324","https://openalex.org/W2162965868","https://openalex.org/W2323427343","https://openalex.org/W2397364765","https://openalex.org/W2605630948","https://openalex.org/W2740698872","https://openalex.org/W2767891136","https://openalex.org/W2938937533","https://openalex.org/W2949311246","https://openalex.org/W3008417423","https://openalex.org/W6605610795","https://openalex.org/W6632766574","https://openalex.org/W6712446785","https://openalex.org/W6774166313"],"related_works":["https://openalex.org/W3092040302","https://openalex.org/W2785090265","https://openalex.org/W3122746303","https://openalex.org/W3193273225","https://openalex.org/W2866375256","https://openalex.org/W3092965216","https://openalex.org/W2008383518","https://openalex.org/W2084662183","https://openalex.org/W3197864488","https://openalex.org/W3126594737","https://openalex.org/W2947869079","https://openalex.org/W1487280517","https://openalex.org/W2965255154","https://openalex.org/W2896214266","https://openalex.org/W2169369091","https://openalex.org/W2002854996","https://openalex.org/W2511608403","https://openalex.org/W2902406879","https://openalex.org/W2887168851","https://openalex.org/W637926580"],"abstract_inverted_index":{"In":[0,69],"biomedical":[1],"research,":[2],"unified":[3],"access":[4,98],"to":[5,51,76,99,102,128],"up-to-date":[6,85],"domain-specific":[7],"knowledge":[8,13,36,57,82,100],"is":[9,14,28,120],"crucial,":[10],"as":[11,122,151],"such":[12],"continuously":[15],"accumulated":[16],"in":[17,41,109],"scientific":[18],"literature":[19],"and":[20,24,32,79,105,115,126,134,156],"structured":[21],"resources.":[22],"Identifying":[23],"extracting":[25],"specific":[26,103],"information":[27],"a":[29,74,152],"challenging":[30],"task":[31],"computational":[33],"analysis":[34,157],"of":[35,112,145,158],"bases":[37],"can":[38,66],"be":[39,67],"valuable":[40],"this":[42,70,146],"direction.":[43],"However,":[44],"for":[45,154],"disease-specific":[46,81,94,159],"analyses":[47],"researchers":[48],"often":[49],"need":[50],"compile":[52],"their":[53,106],"own":[54],"datasets,":[55,64],"integrating":[56],"from":[58],"different":[59],"resources,":[60],"or":[61],"reuse":[62],"existing":[63],"that":[65],"out-of-date.":[68],"study,":[71],"we":[72],"propose":[73],"framework":[75,125],"automatically":[77,147],"retrieve":[78],"integrate":[80],"into":[83],"an":[84,123],"semantic":[86,95,149],"graph,":[87],"the":[88,110,143],"iASiS":[89],"Open":[90],"Data":[91],"Graph.":[92],"This":[93],"graph":[96,150],"provides":[97],"relevant":[101],"concepts":[104],"individual":[107],"aspects,":[108],"form":[111],"concept":[113],"relations":[114],"attributes.":[116],"The":[117],"proposed":[118],"approach":[119],"implemented":[121],"open-source":[124],"applied":[127],"three":[129],"diseases":[130],"(Lung":[131],"Cancer,":[132],"Dementia,":[133],"Duchenne":[135],"Muscular":[136],"Dystrophy).":[137],"Exemplary":[138],"queries":[139],"are":[140],"presented,":[141],"investigating":[142],"potential":[144],"generated":[148],"basis":[153],"retrieval":[155],"knowledge.":[160]},"counts_by_year":[],"updated_date":"2026-03-10T16:38:18.471706","created_date":"2025-10-10T00:00:00"}
