{"id":"https://openalex.org/W2154957844","doi":"https://doi.org/10.1109/cbms.2009.5255438","title":"Enabling effective curation of cancer biomarker research data","display_name":"Enabling effective curation of cancer biomarker research data","publication_year":2009,"publication_date":"2009-08-01","ids":{"openalex":"https://openalex.org/W2154957844","doi":"https://doi.org/10.1109/cbms.2009.5255438","mag":"2154957844"},"language":"en","primary_location":{"id":"doi:10.1109/cbms.2009.5255438","is_oa":false,"landing_page_url":"https://doi.org/10.1109/cbms.2009.5255438","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2009 22nd IEEE International Symposium on Computer-Based Medical Systems","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5060618610","display_name":"Andrew F. Hart","orcid":null},"institutions":[{"id":"https://openalex.org/I1334627681","display_name":"Jet Propulsion Laboratory","ror":"https://ror.org/027k65916","country_code":"US","type":"facility","lineage":["https://openalex.org/I122411786","https://openalex.org/I1334627681","https://openalex.org/I4210124779"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Andrew F. Hart","raw_affiliation_strings":["Jet Propulsion Laboratory, California Institute of Technology, Pasadena, CA, USA"],"affiliations":[{"raw_affiliation_string":"Jet Propulsion Laboratory, California Institute of Technology, Pasadena, CA, USA","institution_ids":["https://openalex.org/I1334627681"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5087994664","display_name":"C. A. Mattmann","orcid":"https://orcid.org/0000-0001-7086-3889"},"institutions":[{"id":"https://openalex.org/I1334627681","display_name":"Jet Propulsion Laboratory","ror":"https://ror.org/027k65916","country_code":"US","type":"facility","lineage":["https://openalex.org/I122411786","https://openalex.org/I1334627681","https://openalex.org/I4210124779"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Chris A. Mattmann","raw_affiliation_strings":["Jet Propulsion Laboratory, California Institute of Technology, Pasadena, CA, USA"],"affiliations":[{"raw_affiliation_string":"Jet Propulsion Laboratory, California Institute of Technology, Pasadena, CA, USA","institution_ids":["https://openalex.org/I1334627681"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5083560161","display_name":"John Tran","orcid":null},"institutions":[{"id":"https://openalex.org/I1334627681","display_name":"Jet Propulsion Laboratory","ror":"https://ror.org/027k65916","country_code":"US","type":"facility","lineage":["https://openalex.org/I122411786","https://openalex.org/I1334627681","https://openalex.org/I4210124779"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"John J. Tran","raw_affiliation_strings":["Jet Propulsion Laboratory, California Institute of Technology, Pasadena, CA, USA"],"affiliations":[{"raw_affiliation_string":"Jet Propulsion Laboratory, California Institute of Technology, Pasadena, CA, USA","institution_ids":["https://openalex.org/I1334627681"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5080540067","display_name":"Daniel Crichton","orcid":"https://orcid.org/0000-0002-5487-7719"},"institutions":[{"id":"https://openalex.org/I1334627681","display_name":"Jet Propulsion Laboratory","ror":"https://ror.org/027k65916","country_code":"US","type":"facility","lineage":["https://openalex.org/I122411786","https://openalex.org/I1334627681","https://openalex.org/I4210124779"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Daniel J. Crichton","raw_affiliation_strings":["Jet Propulsion Laboratory, California Institute of Technology, Pasadena, CA, USA"],"affiliations":[{"raw_affiliation_string":"Jet Propulsion Laboratory, California Institute of Technology, Pasadena, CA, USA","institution_ids":["https://openalex.org/I1334627681"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5082482231","display_name":"J. Steven Hughes","orcid":"https://orcid.org/0000-0003-4851-293X"},"institutions":[{"id":"https://openalex.org/I1334627681","display_name":"Jet Propulsion Laboratory","ror":"https://ror.org/027k65916","country_code":"US","type":"facility","lineage":["https://openalex.org/I122411786","https://openalex.org/I1334627681","https://openalex.org/I4210124779"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"J. Steven Hughes","raw_affiliation_strings":["Jet Propulsion Laboratory, California Institute of Technology, Pasadena, CA, USA"],"affiliations":[{"raw_affiliation_string":"Jet Propulsion Laboratory, California Institute of Technology, Pasadena, CA, USA","institution_ids":["https://openalex.org/I1334627681"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5009731430","display_name":"Heather Kincaid","orcid":"https://orcid.org/0000-0001-5242-5471"},"institutions":[{"id":"https://openalex.org/I1334627681","display_name":"Jet Propulsion Laboratory","ror":"https://ror.org/027k65916","country_code":"US","type":"facility","lineage":["https://openalex.org/I122411786","https://openalex.org/I1334627681","https://openalex.org/I4210124779"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Heather Kincaid","raw_affiliation_strings":["Jet Propulsion Laboratory, California Institute of Technology, Pasadena, CA, USA"],"affiliations":[{"raw_affiliation_string":"Jet Propulsion Laboratory, California Institute of Technology, Pasadena, CA, USA","institution_ids":["https://openalex.org/I1334627681"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102772140","display_name":"Se\u00e1n Kelly","orcid":"https://orcid.org/0009-0001-1426-2410"},"institutions":[{"id":"https://openalex.org/I1334627681","display_name":"Jet Propulsion Laboratory","ror":"https://ror.org/027k65916","country_code":"US","type":"facility","lineage":["https://openalex.org/I122411786","https://openalex.org/I1334627681","https://openalex.org/I4210124779"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Sean Kelly","raw_affiliation_strings":["Jet Propulsion Laboratory, California Institute of Technology, Pasadena, CA, USA"],"affiliations":[{"raw_affiliation_string":"Jet Propulsion Laboratory, California Institute of Technology, Pasadena, CA, USA","institution_ids":["https://openalex.org/I1334627681"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5001508250","display_name":"Kristen Anton","orcid":"https://orcid.org/0000-0002-0773-4141"},"institutions":[{"id":"https://openalex.org/I107672454","display_name":"Dartmouth College","ror":"https://ror.org/049s0rh22","country_code":"US","type":"education","lineage":["https://openalex.org/I107672454"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Kristen Anton","raw_affiliation_strings":["Biostatistics and Epidemiology, Dartmouth Medical School, Lebanon, NH, USA"],"affiliations":[{"raw_affiliation_string":"Biostatistics and Epidemiology, Dartmouth Medical School, Lebanon, NH, USA","institution_ids":["https://openalex.org/I107672454"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5017546962","display_name":"Donald Johnsey","orcid":null},"institutions":[{"id":"https://openalex.org/I4210140884","display_name":"National Cancer Institute","ror":"https://ror.org/040gcmg81","country_code":"US","type":"government","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238","https://openalex.org/I4210140884"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Donald Johnsey","raw_affiliation_strings":["National Cancer Institute, National Institute of Health, Bethesda, MD, USA"],"affiliations":[{"raw_affiliation_string":"National Cancer Institute, National Institute of Health, Bethesda, MD, USA","institution_ids":["https://openalex.org/I4210140884"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5061198533","display_name":"Christos Patriotis","orcid":"https://orcid.org/0000-0001-6441-776X"},"institutions":[{"id":"https://openalex.org/I4210140884","display_name":"National Cancer Institute","ror":"https://ror.org/040gcmg81","country_code":"US","type":"government","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238","https://openalex.org/I4210140884"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Christos Patriotis","raw_affiliation_strings":["National Cancer Institute, National Institute of Health, Bethesda, MD, USA"],"affiliations":[{"raw_affiliation_string":"National Cancer Institute, National Institute of Health, Bethesda, MD, USA","institution_ids":["https://openalex.org/I4210140884"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":10,"corresponding_author_ids":["https://openalex.org/A5060618610"],"corresponding_institution_ids":["https://openalex.org/I1334627681"],"apc_list":null,"apc_paid":null,"fwci":2.8838,"has_fulltext":false,"cited_by_count":7,"citation_normalized_percentile":{"value":0.92533727,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":"2","issue":null,"first_page":"1","last_page":"4"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9976000189781189,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},"topics":[{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9976000189781189,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.996999979019165,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.9902999997138977,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/data-curation","display_name":"Data curation","score":0.7903627157211304},{"id":"https://openalex.org/keywords/context","display_name":"Context (archaeology)","score":0.6763869524002075},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6172972917556763},{"id":"https://openalex.org/keywords/informatics","display_name":"Informatics","score":0.5655794739723206},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.48828864097595215},{"id":"https://openalex.org/keywords/process","display_name":"Process (computing)","score":0.4598361849784851},{"id":"https://openalex.org/keywords/workflow","display_name":"Workflow","score":0.4447413980960846},{"id":"https://openalex.org/keywords/data-management","display_name":"Data management","score":0.4418218731880188},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.19044598937034607},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.15982115268707275}],"concepts":[{"id":"https://openalex.org/C91632574","wikidata":"https://www.wikidata.org/wiki/Q15088675","display_name":"Data curation","level":2,"score":0.7903627157211304},{"id":"https://openalex.org/C2779343474","wikidata":"https://www.wikidata.org/wiki/Q3109175","display_name":"Context (archaeology)","level":2,"score":0.6763869524002075},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6172972917556763},{"id":"https://openalex.org/C191630685","wikidata":"https://www.wikidata.org/wiki/Q4027615","display_name":"Informatics","level":2,"score":0.5655794739723206},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.48828864097595215},{"id":"https://openalex.org/C98045186","wikidata":"https://www.wikidata.org/wiki/Q205663","display_name":"Process (computing)","level":2,"score":0.4598361849784851},{"id":"https://openalex.org/C177212765","wikidata":"https://www.wikidata.org/wiki/Q627335","display_name":"Workflow","level":2,"score":0.4447413980960846},{"id":"https://openalex.org/C1668388","wikidata":"https://www.wikidata.org/wiki/Q1149776","display_name":"Data management","level":2,"score":0.4418218731880188},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.19044598937034607},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.15982115268707275},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0},{"id":"https://openalex.org/C119599485","wikidata":"https://www.wikidata.org/wiki/Q43035","display_name":"Electrical engineering","level":1,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1109/cbms.2009.5255438","is_oa":false,"landing_page_url":"https://doi.org/10.1109/cbms.2009.5255438","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2009 22nd IEEE International Symposium on Computer-Based Medical Systems","raw_type":"proceedings-article"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.594.4363","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.594.4363","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://sunset.usc.edu/~mattmann/pubs/CBMS09.pdf","raw_type":"text"}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.6000000238418579,"display_name":"Industry, innovation and infrastructure","id":"https://metadata.un.org/sdg/9"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320309398","display_name":"California Institute of Technology","ror":"https://ror.org/05dxps055"},{"id":"https://openalex.org/F4320337351","display_name":"National Cancer Institute","ror":"https://ror.org/040gcmg81"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":16,"referenced_works":["https://openalex.org/W325662236","https://openalex.org/W1538181710","https://openalex.org/W1840306201","https://openalex.org/W1879254926","https://openalex.org/W1941650907","https://openalex.org/W1982545858","https://openalex.org/W1997900506","https://openalex.org/W2023172750","https://openalex.org/W2038476425","https://openalex.org/W2053699121","https://openalex.org/W2062393851","https://openalex.org/W2091940856","https://openalex.org/W2154010459","https://openalex.org/W2949835970","https://openalex.org/W3141037274","https://openalex.org/W6611188778"],"related_works":["https://openalex.org/W4306317641","https://openalex.org/W4312975090","https://openalex.org/W1488337274","https://openalex.org/W1262652238","https://openalex.org/W2291862366","https://openalex.org/W1906169760","https://openalex.org/W1206524024","https://openalex.org/W2218801124","https://openalex.org/W2216178707","https://openalex.org/W2087563320"],"abstract_inverted_index":{"The":[0,28,64],"dramatic":[1],"increase":[2],"in":[3,5,69,97,113],"data":[4,123],"the":[6,13,18,55,81,95,98,101,111,126],"area":[7],"of":[8,15,22,42,52,59,83,100],"cancer":[9,84],"research":[10,23,86,122],"has":[11,75],"elevated":[12],"importance":[14],"effectively":[16],"managing":[17],"quality":[19],"and":[20,93,106,119],"consistency":[21],"results":[24],"from":[25],"multiple":[26],"providers.":[27],"U.S.":[29],"National":[30],"Cancer":[31],"Institute's":[32],"Early":[33],"Detection":[34],"Research":[35],"Network":[36],"(EDRN)":[37],"is":[38],"a":[39,43,60,77],"prime":[40],"example":[41],"virtual":[44],"organization,":[45],"sponsoring":[46],"distributed,":[47],"collaborative":[48],"work":[49],"at":[50],"dozens":[51],"institutions":[53],"around":[54],"country.":[56],"As":[57],"part":[58],"comprehensive":[61],"informatics":[62],"infrastructure,":[63],"NASA":[65],"Jet":[66],"Propulsion":[67],"Laboratory,":[68],"collaboration":[70],"with":[71],"Dartmouth":[72],"Medical":[73],"School,":[74],"developed":[76],"web":[78],"application":[79,96],"for":[80],"curation":[82],"biomarker":[85,121],"results.":[87],"In":[88],"this":[89],"paper,":[90],"we":[91],"describe":[92],"evaluate":[94],"context":[99],"EDRN":[102],"content":[103],"management":[104],"process,":[105],"detail":[107],"our":[108],"experience":[109],"using":[110],"tool":[112],"an":[114],"operational":[115],"environment":[116],"to":[117],"capture":[118],"annotate":[120],"generated":[124],"by":[125],"EDRN.":[127]},"counts_by_year":[{"year":2017,"cited_by_count":1},{"year":2014,"cited_by_count":1},{"year":2013,"cited_by_count":1},{"year":2012,"cited_by_count":1}],"updated_date":"2026-04-04T16:13:02.066488","created_date":"2025-10-10T00:00:00"}
