{"id":"https://openalex.org/W2150561871","doi":"https://doi.org/10.1109/cbms.2009.5255362","title":"Ontology driven data integration for autism research","display_name":"Ontology driven data integration for autism research","publication_year":2009,"publication_date":"2009-08-01","ids":{"openalex":"https://openalex.org/W2150561871","doi":"https://doi.org/10.1109/cbms.2009.5255362","mag":"2150561871"},"language":"en","primary_location":{"id":"doi:10.1109/cbms.2009.5255362","is_oa":false,"landing_page_url":"https://doi.org/10.1109/cbms.2009.5255362","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2009 22nd IEEE International Symposium on Computer-Based Medical Systems","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5051282335","display_name":"Lynn Young","orcid":null},"institutions":[{"id":"https://openalex.org/I1299303238","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88","country_code":"US","type":"government","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Lynn Young","raw_affiliation_strings":["Division of Computational Bioscience, CIT, U.S. National Institutes of Health, Bethesda, MD, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Division of Computational Bioscience, CIT, U.S. National Institutes of Health, Bethesda, MD, USA","institution_ids":["https://openalex.org/I1299303238"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5069923867","display_name":"Samson W. Tu","orcid":"https://orcid.org/0000-0002-0295-7821"},"institutions":[{"id":"https://openalex.org/I97018004","display_name":"Stanford University","ror":"https://ror.org/00f54p054","country_code":"US","type":"education","lineage":["https://openalex.org/I97018004"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Samson W. Tu","raw_affiliation_strings":["Center of Biomedical Informatics Research, University of Stanford, Stanford, CA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center of Biomedical Informatics Research, University of Stanford, Stanford, CA, USA","institution_ids":["https://openalex.org/I97018004"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5083964706","display_name":"Lakshika Tennakoon","orcid":"https://orcid.org/0000-0002-0149-9021"},"institutions":[{"id":"https://openalex.org/I97018004","display_name":"Stanford University","ror":"https://ror.org/00f54p054","country_code":"US","type":"education","lineage":["https://openalex.org/I97018004"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Lakshika Tennakoon","raw_affiliation_strings":["Center of Biomedical Informatics Research, University of Stanford, Stanford, CA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center of Biomedical Informatics Research, University of Stanford, Stanford, CA, USA","institution_ids":["https://openalex.org/I97018004"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5064051918","display_name":"David Vismer","orcid":null},"institutions":[{"id":"https://openalex.org/I1299303238","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88","country_code":"US","type":"government","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"David Vismer","raw_affiliation_strings":["Division of Computational Bioscience, CIT, U.S. National Institutes of Health, Bethesda, MD, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Division of Computational Bioscience, CIT, U.S. National Institutes of Health, Bethesda, MD, USA","institution_ids":["https://openalex.org/I1299303238"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5111988108","display_name":"Vadim Astakhov","orcid":null},"institutions":[{"id":"https://openalex.org/I36258959","display_name":"University of California San Diego","ror":"https://ror.org/0168r3w48","country_code":"US","type":"education","lineage":["https://openalex.org/I36258959"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Vadim Astakhov","raw_affiliation_strings":["Center of Research in Biological Systems, University of California, San Diego, CA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center of Research in Biological Systems, University of California, San Diego, CA, USA","institution_ids":["https://openalex.org/I36258959"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5057846313","display_name":"Amarnath Gupta","orcid":"https://orcid.org/0000-0003-0897-120X"},"institutions":[{"id":"https://openalex.org/I36258959","display_name":"University of California San Diego","ror":"https://ror.org/0168r3w48","country_code":"US","type":"education","lineage":["https://openalex.org/I36258959"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Amarnath Gupta","raw_affiliation_strings":["Center of Research in Biological Systems, University of California, San Diego, CA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center of Research in Biological Systems, University of California, San Diego, CA, USA","institution_ids":["https://openalex.org/I36258959"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076014872","display_name":"Jeffrey S. Grethe","orcid":"https://orcid.org/0000-0001-5212-7052"},"institutions":[{"id":"https://openalex.org/I36258959","display_name":"University of California San Diego","ror":"https://ror.org/0168r3w48","country_code":"US","type":"education","lineage":["https://openalex.org/I36258959"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jeffrey S. Grethe","raw_affiliation_strings":["Center of Research in Biological Systems, University of California, San Diego, CA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center of Research in Biological Systems, University of California, San Diego, CA, USA","institution_ids":["https://openalex.org/I36258959"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5061037631","display_name":"Maryann E. Martone","orcid":"https://orcid.org/0000-0002-8406-3871"},"institutions":[{"id":"https://openalex.org/I36258959","display_name":"University of California San Diego","ror":"https://ror.org/0168r3w48","country_code":"US","type":"education","lineage":["https://openalex.org/I36258959"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Maryann E. Martone","raw_affiliation_strings":["Center of Research in Biological Systems, University of California, San Diego, CA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center of Research in Biological Systems, University of California, San Diego, CA, USA","institution_ids":["https://openalex.org/I36258959"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5060076409","display_name":"Amar K. Das","orcid":"https://orcid.org/0000-0003-3556-0844"},"institutions":[{"id":"https://openalex.org/I97018004","display_name":"Stanford University","ror":"https://ror.org/00f54p054","country_code":"US","type":"education","lineage":["https://openalex.org/I97018004"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Amar K. Das","raw_affiliation_strings":["Center of Biomedical Informatics Research, University of Stanford, Stanford, CA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center of Biomedical Informatics Research, University of Stanford, Stanford, CA, USA","institution_ids":["https://openalex.org/I97018004"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5017236431","display_name":"Matthew McAuliffe","orcid":"https://orcid.org/0000-0002-2409-5126"},"institutions":[{"id":"https://openalex.org/I1299303238","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88","country_code":"US","type":"government","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Matthew J. McAuliffe","raw_affiliation_strings":["Division of Computational Bioscience, CIT, U.S. National Institutes of Health, Bethesda, MD, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Division of Computational Bioscience, CIT, U.S. National Institutes of Health, Bethesda, MD, USA","institution_ids":["https://openalex.org/I1299303238"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":5.9048,"has_fulltext":false,"cited_by_count":15,"citation_normalized_percentile":{"value":0.96290027,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":"105","issue":null,"first_page":"1","last_page":"7"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9932000041007996,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9932000041007996,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11642","display_name":"Genomics and Rare Diseases","score":0.9573000073432922,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10106","display_name":"Autism Spectrum Disorder Research","score":0.9516000151634216,"subfield":{"id":"https://openalex.org/subfields/2805","display_name":"Cognitive Neuroscience"},"field":{"id":"https://openalex.org/fields/28","display_name":"Neuroscience"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/ontology","display_name":"Ontology","score":0.8538744449615479},{"id":"https://openalex.org/keywords/autism","display_name":"Autism","score":0.7907001972198486},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.748649001121521},{"id":"https://openalex.org/keywords/ontology-based-data-integration","display_name":"Ontology-based data integration","score":0.5752503871917725},{"id":"https://openalex.org/keywords/autism-spectrum-disorder","display_name":"Autism spectrum disorder","score":0.5349107384681702},{"id":"https://openalex.org/keywords/data-integration","display_name":"Data integration","score":0.5083720088005066},{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.491091251373291},{"id":"https://openalex.org/keywords/architecture","display_name":"Architecture","score":0.4770980477333069},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.40320146083831787},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.3580652177333832},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.252515971660614},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.23653602600097656},{"id":"https://openalex.org/keywords/semantic-web","display_name":"Semantic Web","score":0.1937902271747589},{"id":"https://openalex.org/keywords/psychology","display_name":"Psychology","score":0.15666452050209045}],"concepts":[{"id":"https://openalex.org/C25810664","wikidata":"https://www.wikidata.org/wiki/Q44325","display_name":"Ontology","level":2,"score":0.8538744449615479},{"id":"https://openalex.org/C205778803","wikidata":"https://www.wikidata.org/wiki/Q38404","display_name":"Autism","level":2,"score":0.7907001972198486},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.748649001121521},{"id":"https://openalex.org/C22550185","wikidata":"https://www.wikidata.org/wiki/Q7095047","display_name":"Ontology-based data integration","level":3,"score":0.5752503871917725},{"id":"https://openalex.org/C2778538070","wikidata":"https://www.wikidata.org/wiki/Q1436063","display_name":"Autism spectrum disorder","level":3,"score":0.5349107384681702},{"id":"https://openalex.org/C72634772","wikidata":"https://www.wikidata.org/wiki/Q386824","display_name":"Data integration","level":2,"score":0.5083720088005066},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.491091251373291},{"id":"https://openalex.org/C123657996","wikidata":"https://www.wikidata.org/wiki/Q12271","display_name":"Architecture","level":2,"score":0.4770980477333069},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.40320146083831787},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.3580652177333832},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.252515971660614},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.23653602600097656},{"id":"https://openalex.org/C2129575","wikidata":"https://www.wikidata.org/wiki/Q54837","display_name":"Semantic Web","level":2,"score":0.1937902271747589},{"id":"https://openalex.org/C15744967","wikidata":"https://www.wikidata.org/wiki/Q9418","display_name":"Psychology","level":0,"score":0.15666452050209045},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C153349607","wikidata":"https://www.wikidata.org/wiki/Q36649","display_name":"Visual arts","level":1,"score":0.0},{"id":"https://openalex.org/C138496976","wikidata":"https://www.wikidata.org/wiki/Q175002","display_name":"Developmental psychology","level":1,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C142362112","wikidata":"https://www.wikidata.org/wiki/Q735","display_name":"Art","level":0,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/cbms.2009.5255362","is_oa":false,"landing_page_url":"https://doi.org/10.1109/cbms.2009.5255362","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2009 22nd IEEE International Symposium on Computer-Based Medical Systems","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/17","score":0.49000000953674316,"display_name":"Partnerships for the goals"}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":15,"referenced_works":["https://openalex.org/W115643487","https://openalex.org/W184002052","https://openalex.org/W1540082526","https://openalex.org/W1577405294","https://openalex.org/W1977678574","https://openalex.org/W1993597101","https://openalex.org/W2004884668","https://openalex.org/W2032433853","https://openalex.org/W2055461575","https://openalex.org/W2079421846","https://openalex.org/W2109181563","https://openalex.org/W2117048009","https://openalex.org/W2169924903","https://openalex.org/W2415544584","https://openalex.org/W6632265085"],"related_works":["https://openalex.org/W2284058717","https://openalex.org/W2159818280","https://openalex.org/W2114954739","https://openalex.org/W2140329110","https://openalex.org/W1794266373","https://openalex.org/W2889792096","https://openalex.org/W1506177826","https://openalex.org/W1830516355","https://openalex.org/W2158851296","https://openalex.org/W4251889114"],"abstract_inverted_index":{"Autism":[0,25],"spectrum":[1],"disorder":[2],"is":[3,28,56,73],"an":[4],"inherently":[5],"complex":[6],"phenomenon":[7],"requiring":[8],"large":[9],"studies":[10],"of":[11,18,86,92],"many":[12],"different":[13],"types":[14],"to":[15,31,42,63],"further":[16],"understanding":[17],"its":[19],"causes.":[20],"The":[21,68],"National":[22],"Database":[23],"for":[24,40,59],"Research":[26],"(NDAR)":[27],"being":[29,57],"constructed":[30],"aid":[32],"in":[33],"this":[34,87],"effort":[35],"by":[36,51,61],"providing":[37],"a":[38,52],"means":[39],"researchers":[41],"share":[43],"and":[44,97,105],"integrate":[45],"data.":[46],"An":[47],"autism":[48,88],"ontology":[49,98],"drafted":[50],"group":[53],"at":[54],"Stanford":[55],"incorporated":[58],"use":[60,85],"NDAR":[62,72],"allow":[64],"semantic":[65],"data":[66,79,93],"integration.":[67],"architecture":[69],"upon":[70],"which":[71],"built":[74],"-":[75,82],"the":[76,84],"UCSD":[77],"developed":[78],"integration":[80],"environment":[81],"supports":[83],"ontology,":[89],"including":[90],"annotation":[91],"with":[94],"ontological":[95],"concepts":[96],"enhanced":[99],"queries":[100],"on":[101],"databases,":[102],"both":[103],"central":[104],"federated.":[106]},"counts_by_year":[{"year":2023,"cited_by_count":1},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":1},{"year":2017,"cited_by_count":1},{"year":2014,"cited_by_count":2},{"year":2013,"cited_by_count":2},{"year":2012,"cited_by_count":3}],"updated_date":"2026-07-29T14:22:42.915294","created_date":"2025-10-10T00:00:00"}
