{"id":"https://openalex.org/W2102782795","doi":"https://doi.org/10.1109/cbms.2009.5255357","title":"Knowledge-based search for oncological literature","display_name":"Knowledge-based search for oncological literature","publication_year":2009,"publication_date":"2009-08-01","ids":{"openalex":"https://openalex.org/W2102782795","doi":"https://doi.org/10.1109/cbms.2009.5255357","mag":"2102782795"},"language":"en","primary_location":{"id":"doi:10.1109/cbms.2009.5255357","is_oa":false,"landing_page_url":"https://doi.org/10.1109/cbms.2009.5255357","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2009 22nd IEEE International Symposium on Computer-Based Medical Systems","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5102905135","display_name":"V\u00edt Nov\u00e1\u010dek","orcid":"https://orcid.org/0000-0003-4687-6043"},"institutions":[{"id":"https://openalex.org/I188760350","display_name":"Ollscoil na Gaillimhe \u2013 University of Galway","ror":"https://ror.org/03bea9k73","country_code":"IE","type":"education","lineage":["https://openalex.org/I188760350"]}],"countries":["IE"],"is_corresponding":true,"raw_author_name":"Vit Novacek","raw_affiliation_strings":["DERI, National University of Ireland, Galway, Ireland","DERI, National University of Ireland Galway, IDA Business Park, Galway, Ireland"],"affiliations":[{"raw_affiliation_string":"DERI, National University of Ireland, Galway, Ireland","institution_ids":["https://openalex.org/I188760350"]},{"raw_affiliation_string":"DERI, National University of Ireland Galway, IDA Business Park, Galway, Ireland","institution_ids":["https://openalex.org/I188760350"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5011041769","display_name":"Tudor Groza","orcid":"https://orcid.org/0000-0003-2267-8333"},"institutions":[{"id":"https://openalex.org/I188760350","display_name":"Ollscoil na Gaillimhe \u2013 University of Galway","ror":"https://ror.org/03bea9k73","country_code":"IE","type":"education","lineage":["https://openalex.org/I188760350"]}],"countries":["IE"],"is_corresponding":false,"raw_author_name":"Tudor Groza","raw_affiliation_strings":["DERI, National University of Ireland, Galway, Ireland","DERI, National University of Ireland Galway, IDA Business Park, Galway, Ireland"],"affiliations":[{"raw_affiliation_string":"DERI, National University of Ireland, Galway, Ireland","institution_ids":["https://openalex.org/I188760350"]},{"raw_affiliation_string":"DERI, National University of Ireland Galway, IDA Business Park, Galway, Ireland","institution_ids":["https://openalex.org/I188760350"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5024322708","display_name":"Siegfried Handschuh","orcid":"https://orcid.org/0000-0002-6195-9034"},"institutions":[{"id":"https://openalex.org/I188760350","display_name":"Ollscoil na Gaillimhe \u2013 University of Galway","ror":"https://ror.org/03bea9k73","country_code":"IE","type":"education","lineage":["https://openalex.org/I188760350"]}],"countries":["IE"],"is_corresponding":false,"raw_author_name":"Siegfried Handschuh","raw_affiliation_strings":["DERI, National University of Ireland, Galway, Ireland","DERI, National University of Ireland Galway, IDA Business Park, Galway, Ireland"],"affiliations":[{"raw_affiliation_string":"DERI, National University of Ireland, Galway, Ireland","institution_ids":["https://openalex.org/I188760350"]},{"raw_affiliation_string":"DERI, National University of Ireland Galway, IDA Business Park, Galway, Ireland","institution_ids":["https://openalex.org/I188760350"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5102905135"],"corresponding_institution_ids":["https://openalex.org/I188760350"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.14909461,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"1","last_page":"8"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9908999800682068,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7564276456832886},{"id":"https://openalex.org/keywords/semantic-search","display_name":"Semantic search","score":0.7478289604187012},{"id":"https://openalex.org/keywords/key","display_name":"Key (lock)","score":0.5610386729240417},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.5533959269523621},{"id":"https://openalex.org/keywords/software-deployment","display_name":"Software deployment","score":0.5368478894233704},{"id":"https://openalex.org/keywords/domain","display_name":"Domain (mathematical analysis)","score":0.5253880620002747},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.5162858366966248},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.4494395852088928},{"id":"https://openalex.org/keywords/semantics","display_name":"Semantics (computer science)","score":0.43938368558883667},{"id":"https://openalex.org/keywords/architecture","display_name":"Architecture","score":0.41881993412971497},{"id":"https://openalex.org/keywords/search-engine","display_name":"Search engine","score":0.40794044733047485},{"id":"https://openalex.org/keywords/software-engineering","display_name":"Software engineering","score":0.1878637671470642},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.08099541068077087}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7564276456832886},{"id":"https://openalex.org/C166423231","wikidata":"https://www.wikidata.org/wiki/Q1891170","display_name":"Semantic search","level":3,"score":0.7478289604187012},{"id":"https://openalex.org/C26517878","wikidata":"https://www.wikidata.org/wiki/Q228039","display_name":"Key (lock)","level":2,"score":0.5610386729240417},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.5533959269523621},{"id":"https://openalex.org/C105339364","wikidata":"https://www.wikidata.org/wiki/Q2297740","display_name":"Software deployment","level":2,"score":0.5368478894233704},{"id":"https://openalex.org/C36503486","wikidata":"https://www.wikidata.org/wiki/Q11235244","display_name":"Domain (mathematical analysis)","level":2,"score":0.5253880620002747},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.5162858366966248},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.4494395852088928},{"id":"https://openalex.org/C184337299","wikidata":"https://www.wikidata.org/wiki/Q1437428","display_name":"Semantics (computer science)","level":2,"score":0.43938368558883667},{"id":"https://openalex.org/C123657996","wikidata":"https://www.wikidata.org/wiki/Q12271","display_name":"Architecture","level":2,"score":0.41881993412971497},{"id":"https://openalex.org/C97854310","wikidata":"https://www.wikidata.org/wiki/Q19541","display_name":"Search engine","level":2,"score":0.40794044733047485},{"id":"https://openalex.org/C115903868","wikidata":"https://www.wikidata.org/wiki/Q80993","display_name":"Software engineering","level":1,"score":0.1878637671470642},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.08099541068077087},{"id":"https://openalex.org/C38652104","wikidata":"https://www.wikidata.org/wiki/Q3510521","display_name":"Computer security","level":1,"score":0.0},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0},{"id":"https://openalex.org/C153349607","wikidata":"https://www.wikidata.org/wiki/Q36649","display_name":"Visual arts","level":1,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0},{"id":"https://openalex.org/C142362112","wikidata":"https://www.wikidata.org/wiki/Q735","display_name":"Art","level":0,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1109/cbms.2009.5255357","is_oa":false,"landing_page_url":"https://doi.org/10.1109/cbms.2009.5255357","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2009 22nd IEEE International Symposium on Computer-Based Medical Systems","raw_type":"proceedings-article"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.166.113","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.166.113","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://siegfried-handschuh.net/pub/2009/oncological_cbms09.pdf","raw_type":"text"},{"id":"pmh:oai:espace.library.uq.edu.au:UQ:231409","is_oa":false,"landing_page_url":null,"pdf_url":null,"source":{"id":"https://openalex.org/S4306402388","display_name":"Queensland's institutional digital repository (The University of Queensland)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I165143802","host_organization_name":"The University of Queensland","host_organization_lineage":["https://openalex.org/I165143802"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Conference Paper"}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"Responsible consumption and production","score":0.5,"id":"https://metadata.un.org/sdg/12"}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":20,"referenced_works":["https://openalex.org/W136846643","https://openalex.org/W166849211","https://openalex.org/W1486670356","https://openalex.org/W1535530912","https://openalex.org/W1745539279","https://openalex.org/W1846742003","https://openalex.org/W1971676632","https://openalex.org/W2053673723","https://openalex.org/W2060907774","https://openalex.org/W2097032106","https://openalex.org/W2131429285","https://openalex.org/W2154687603","https://openalex.org/W2502933860","https://openalex.org/W2911262481","https://openalex.org/W2912565176","https://openalex.org/W4211007335","https://openalex.org/W4239696231","https://openalex.org/W4285719527","https://openalex.org/W6632110597","https://openalex.org/W6638830915"],"related_works":["https://openalex.org/W2359166167","https://openalex.org/W3590553","https://openalex.org/W4297963434","https://openalex.org/W2336826532","https://openalex.org/W3040185272","https://openalex.org/W3110844189","https://openalex.org/W2373953901","https://openalex.org/W2214614887","https://openalex.org/W2348367558","https://openalex.org/W1883184246"],"abstract_inverted_index":{"Using":[0],"the":[1,5,60,87,101],"current":[2],"state":[3],"of":[4,92],"art":[6],"in":[7,67],"life":[8],"science":[9],"publication":[10,81],"search":[11,17,30,56,82],"(e.g.,":[12,39],"PubMed),":[13],"one":[14],"can":[15],"efficiently":[16],"for":[18,31],"resources":[19],"containing":[20],"particular":[21],"key-words":[22],"or":[23,44],"their":[24],"combinations.":[25],"It":[26],"is":[27],"impossible":[28],"to":[29,63,77],"abstract":[32],"concepts":[33],"and":[34,89,108],"expressive":[35,52],"relations":[36],"between":[37],"them":[38],"type":[40],"of,":[41],"different":[42],"from":[43],"part":[45],"of),":[46],"though.":[47],"Nevertheless,":[48],"such":[49],"a":[50,79,93],"more":[51],"-":[53,55],"semantic":[54,80],"could":[57],"largely":[58],"reduce":[59],"efforts":[61],"related":[62,76],"finding":[64],"appropriate":[65],"answers":[66],"biomedical":[68],"articles.":[69],"In":[70],"this":[71],"paper":[72],"we":[73,85,98],"identify":[74],"challenges":[75],"building":[78],"engine.":[83],"Then":[84],"describe":[86],"architecture":[88],"usage":[90],"principles":[91],"tool":[94],"tackling":[95],"them.":[96],"Eventually,":[97],"report":[99],"on":[100,104],"tool's":[102],"deployment":[103],"oncological":[105],"literature":[106],"data":[107],"preliminary":[109],"tests":[110],"with":[111],"domain":[112],"experts.":[113]},"counts_by_year":[],"updated_date":"2026-04-05T17:49:38.594831","created_date":"2025-10-10T00:00:00"}
