{"id":"https://openalex.org/W1941650907","doi":"https://doi.org/10.1109/cbms.2003.1212776","title":"A national virtual specimen database for early cancer detection","display_name":"A national virtual specimen database for early cancer detection","publication_year":2003,"publication_date":"2003-11-04","ids":{"openalex":"https://openalex.org/W1941650907","doi":"https://doi.org/10.1109/cbms.2003.1212776","mag":"1941650907"},"language":"en","primary_location":{"id":"doi:10.1109/cbms.2003.1212776","is_oa":false,"landing_page_url":"https://doi.org/10.1109/cbms.2003.1212776","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"16th IEEE Symposium Computer-Based Medical Systems, 2003. Proceedings.","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://zenodo.org/record/1265434","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5009731430","display_name":"Heather Kincaid","orcid":"https://orcid.org/0000-0001-5242-5471"},"institutions":[{"id":"https://openalex.org/I4210089486","display_name":"Fred Hutch Cancer Center","ror":"https://ror.org/007ps6h72","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210089486"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"H. Kincaid","raw_affiliation_strings":["Fred Hutchinson Cancer Research Center, USA"],"affiliations":[{"raw_affiliation_string":"Fred Hutchinson Cancer Research Center, USA","institution_ids":["https://openalex.org/I4210089486"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5080540067","display_name":"Daniel Crichton","orcid":"https://orcid.org/0000-0002-5487-7719"},"institutions":[{"id":"https://openalex.org/I1334627681","display_name":"Jet Propulsion Laboratory","ror":"https://ror.org/027k65916","country_code":"US","type":"facility","lineage":["https://openalex.org/I122411786","https://openalex.org/I1334627681","https://openalex.org/I4210124779"]},{"id":"https://openalex.org/I122411786","display_name":"California Institute of Technology","ror":"https://ror.org/05dxps055","country_code":"US","type":"education","lineage":["https://openalex.org/I122411786"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"D. Crichton","raw_affiliation_strings":["NASA Jet Propulsion Laboratory, California Institute of Technology, USA","[NASA Jet Propulsion Laboratory, California Institute of Technology, USA]"],"affiliations":[{"raw_affiliation_string":"NASA Jet Propulsion Laboratory, California Institute of Technology, USA","institution_ids":["https://openalex.org/I1334627681"]},{"raw_affiliation_string":"[NASA Jet Propulsion Laboratory, California Institute of Technology, USA]","institution_ids":["https://openalex.org/I122411786"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5028131202","display_name":"Marcy Winget","orcid":"https://orcid.org/0000-0002-5893-280X"},"institutions":[{"id":"https://openalex.org/I1334627681","display_name":"Jet Propulsion Laboratory","ror":"https://ror.org/027k65916","country_code":"US","type":"facility","lineage":["https://openalex.org/I122411786","https://openalex.org/I1334627681","https://openalex.org/I4210124779"]},{"id":"https://openalex.org/I122411786","display_name":"California Institute of Technology","ror":"https://ror.org/05dxps055","country_code":"US","type":"education","lineage":["https://openalex.org/I122411786"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"M. Winget","raw_affiliation_strings":["NASA Jet Propulsion Laboratory, California Institute of Technology, USA","[NASA Jet Propulsion Laboratory, California Institute of Technology, USA]"],"affiliations":[{"raw_affiliation_string":"NASA Jet Propulsion Laboratory, California Institute of Technology, USA","institution_ids":["https://openalex.org/I1334627681"]},{"raw_affiliation_string":"[NASA Jet Propulsion Laboratory, California Institute of Technology, USA]","institution_ids":["https://openalex.org/I122411786"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102772140","display_name":"Se\u00e1n Kelly","orcid":"https://orcid.org/0009-0001-1426-2410"},"institutions":[{"id":"https://openalex.org/I1299022934","display_name":"United States Department of Health and Human Services","ror":"https://ror.org/033jnv181","country_code":"US","type":"government","lineage":["https://openalex.org/I1299022934"]},{"id":"https://openalex.org/I1299303238","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88","country_code":"US","type":"government","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238"]},{"id":"https://openalex.org/I4210140884","display_name":"National Cancer Institute","ror":"https://ror.org/040gcmg81","country_code":"US","type":"government","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238","https://openalex.org/I4210140884"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"S. Kelly","raw_affiliation_strings":["National Cancer Institute, National Institutes of Health DHHS, USA","[National Cancer Institute, National Institutes of Health DHHS, USA]"],"affiliations":[{"raw_affiliation_string":"National Cancer Institute, National Institutes of Health DHHS, USA","institution_ids":["https://openalex.org/I1299022934","https://openalex.org/I1299303238","https://openalex.org/I4210140884"]},{"raw_affiliation_string":"[National Cancer Institute, National Institutes of Health DHHS, USA]","institution_ids":["https://openalex.org/I1299303238"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5017546962","display_name":"Donald Johnsey","orcid":null},"institutions":[{"id":"https://openalex.org/I4210089486","display_name":"Fred Hutch Cancer Center","ror":"https://ror.org/007ps6h72","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210089486"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"D. Johnsey","raw_affiliation_strings":["Fred Hutchinson Cancer Research Center, USA"],"affiliations":[{"raw_affiliation_string":"Fred Hutchinson Cancer Research Center, USA","institution_ids":["https://openalex.org/I4210089486"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101623259","display_name":"Sudhir Srivastava","orcid":"https://orcid.org/0000-0002-7798-9772"},"institutions":[{"id":"https://openalex.org/I1299303238","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88","country_code":"US","type":"government","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238"]},{"id":"https://openalex.org/I4210140884","display_name":"National Cancer Institute","ror":"https://ror.org/040gcmg81","country_code":"US","type":"government","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238","https://openalex.org/I4210140884"]},{"id":"https://openalex.org/I1299022934","display_name":"United States Department of Health and Human Services","ror":"https://ror.org/033jnv181","country_code":"US","type":"government","lineage":["https://openalex.org/I1299022934"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"S. Srivastava","raw_affiliation_strings":["National Cancer Institute, National Institutes of Health DHHS, USA","[National Cancer Institute, National Institutes of Health DHHS, USA]"],"affiliations":[{"raw_affiliation_string":"National Cancer Institute, National Institutes of Health DHHS, USA","institution_ids":["https://openalex.org/I1299022934","https://openalex.org/I1299303238","https://openalex.org/I4210140884"]},{"raw_affiliation_string":"[National Cancer Institute, National Institutes of Health DHHS, USA]","institution_ids":["https://openalex.org/I1299303238"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5110261102","display_name":"Mark Thornquist","orcid":null},"institutions":[{"id":"https://openalex.org/I4210089486","display_name":"Fred Hutch Cancer Center","ror":"https://ror.org/007ps6h72","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210089486"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"M. Thornquist","raw_affiliation_strings":["Fred Hutchinson Cancer Research Center, USA"],"affiliations":[{"raw_affiliation_string":"Fred Hutchinson Cancer Research Center, USA","institution_ids":["https://openalex.org/I4210089486"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5009731430"],"corresponding_institution_ids":["https://openalex.org/I4210089486"],"apc_list":null,"apc_paid":null,"fwci":1.1809,"has_fulltext":false,"cited_by_count":9,"citation_normalized_percentile":{"value":0.8735813,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":96},"biblio":{"volume":"65","issue":null,"first_page":"117","last_page":"123"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9939000010490417,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},"topics":[{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9939000010490417,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.98580002784729,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10862","display_name":"AI in cancer detection","score":0.9787999987602234,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6166759133338928},{"id":"https://openalex.org/keywords/cancer","display_name":"Cancer","score":0.4426814317703247},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.4258680045604706},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.14869478344917297}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6166759133338928},{"id":"https://openalex.org/C121608353","wikidata":"https://www.wikidata.org/wiki/Q12078","display_name":"Cancer","level":2,"score":0.4426814317703247},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.4258680045604706},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.14869478344917297},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1109/cbms.2003.1212776","is_oa":false,"landing_page_url":"https://doi.org/10.1109/cbms.2003.1212776","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"16th IEEE Symposium Computer-Based Medical Systems, 2003. Proceedings.","raw_type":"proceedings-article"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.117.2772","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.117.2772","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://oodt.jpl.nasa.gov/oodt-site/docs/papers/specimen/cbms.pdf","raw_type":"text"},{"id":"pmh:oai:zenodo.org:1265434","is_oa":true,"landing_page_url":"https://zenodo.org/record/1265434","pdf_url":null,"source":{"id":"https://openalex.org/S4306400562","display_name":"Zenodo (CERN European Organization for Nuclear Research)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I67311998","host_organization_name":"European Organization for Nuclear Research","host_organization_lineage":["https://openalex.org/I67311998"],"host_organization_lineage_names":[],"type":"repository"},"license":"public-domain","license_id":"https://openalex.org/licenses/public-domain","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"info:eu-repo/semantics/conferencePaper"}],"best_oa_location":{"id":"pmh:oai:zenodo.org:1265434","is_oa":true,"landing_page_url":"https://zenodo.org/record/1265434","pdf_url":null,"source":{"id":"https://openalex.org/S4306400562","display_name":"Zenodo (CERN European Organization for Nuclear Research)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I67311998","host_organization_name":"European Organization for Nuclear Research","host_organization_lineage":["https://openalex.org/I67311998"],"host_organization_lineage_names":[],"type":"repository"},"license":"public-domain","license_id":"https://openalex.org/licenses/public-domain","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"info:eu-repo/semantics/conferencePaper"},"sustainable_development_goals":[{"display_name":"Industry, innovation and infrastructure","id":"https://metadata.un.org/sdg/9","score":0.6000000238418579}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":5,"referenced_works":["https://openalex.org/W32772682","https://openalex.org/W1590601550","https://openalex.org/W1879254926","https://openalex.org/W1982545858","https://openalex.org/W2068312256"],"related_works":["https://openalex.org/W2748952813","https://openalex.org/W2390279801","https://openalex.org/W2358668433","https://openalex.org/W2376932109","https://openalex.org/W2001405890","https://openalex.org/W2382290278","https://openalex.org/W2350741829","https://openalex.org/W2530322880","https://openalex.org/W1596801655","https://openalex.org/W2359140296"],"abstract_inverted_index":{"Access":[0],"to":[1,35,41,109,141,162,195,202,206],"biospecimens":[2],"is":[3],"essential":[4],"for":[5,61],"enabling":[6],"cancer":[7,27,70],"biomarker":[8],"discovery.":[9],"The":[10,47,91],"National":[11,98],"Cancer":[12,94,99],"Institute's":[13],"(NCI)":[14],"Early":[15],"Detection":[16],"Research":[17,95],"Network":[18],"(EDRN)":[19],"comprises":[20],"and":[21,43,53,73,75,101,123,172,187,192],"integrates":[22],"a":[23,31,37,115,154,164,210],"large":[24],"number":[25],"of":[26,49,82,126,219],"research":[28,118],"institutions":[29,52],"into":[30,189],"network":[32],"in":[33,69,150,209],"order":[34],"establish":[36],"collaborative":[38,55,80],"scientific":[39],"environment":[40,119],"discover":[42],"validate":[44],"disease":[45],"markers.":[46],"diversity":[48],"both":[50],"the":[51,54,59,79,83,85,97,121,127,133,139,147,156],"focus":[56],"has":[57],"created":[58],"need":[60,140],"establishing":[62],"cross-disciplinary":[63],"teams":[64],"focused":[65],"on":[66],"integrating":[67],"expertise":[68],"research,":[71],"computational":[72],"biostatistics,":[74],"computer":[76],"science.":[77],"Given":[78],"design":[81],"network,":[84],"EDRN":[86,136],"needed":[87,205],"an":[88,111,160],"informatics":[89,112,157],"infrastructure.":[90],"Fred":[92],"Hutchinson":[93],"Center,":[96],"Institute,":[100],"NASA's":[102],"Jet":[103],"Propulsion":[104],"Laboratory":[105],"(JPL)":[106],"teamed":[107],"up":[108],"build":[110],"infrastructure":[113],"creating":[114],"collaborative,":[116],"science-driven":[117],"despite":[120],"geographic":[122],"morphologic":[124],"differences":[125],"information":[128],"systems":[129],"that":[130,200,212],"existed":[131],"within":[132],"diverse":[134],"network.":[135],"investigators":[137],"identified":[138],"share":[142],"biospecimen":[143,166],"data":[144],"captured":[145],"across":[146],"country":[148],"managed":[149],"disparate":[151],"databases.":[152],"As":[153],"result,":[155],"team":[158],"initiated":[159],"effort":[161],"create":[163],"virtual":[165],"database":[167],"whereby":[168],"scientists":[169],"could":[170],"search":[171],"retrieve":[173],"details":[174],"about":[175],"specimens":[176],"located":[177],"at":[178],"collaborating":[179],"institutions.":[180],"Each":[181],"database,":[182],"however,":[183],"was":[184],"locally":[185],"implemented":[186],"integrated":[188],"collection":[190],"processes":[191],"methods":[193],"unique":[194],"each":[196],"institution.":[197],"This":[198],"meant":[199],"efforts":[201],"integrate":[203],"databases":[204],"be":[207],"done":[208],"manner":[211],"did":[213],"not":[214],"require":[215],"redesign":[216],"or":[217],"re-implementation":[218],"existing":[220],"systems.":[221]},"counts_by_year":[{"year":2022,"cited_by_count":1},{"year":2014,"cited_by_count":2},{"year":2012,"cited_by_count":1}],"updated_date":"2026-04-05T17:49:38.594831","created_date":"2025-10-10T00:00:00"}
