{"id":"https://openalex.org/W1945094131","doi":"https://doi.org/10.1109/cbms.2001.941767","title":"TEST: a Web-based T-cell epitope search tool","display_name":"TEST: a Web-based T-cell epitope search tool","publication_year":2002,"publication_date":"2002-11-13","ids":{"openalex":"https://openalex.org/W1945094131","doi":"https://doi.org/10.1109/cbms.2001.941767","mag":"1945094131"},"language":"en","primary_location":{"id":"doi:10.1109/cbms.2001.941767","is_oa":false,"landing_page_url":"https://doi.org/10.1109/cbms.2001.941767","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings 14th IEEE Symposium on Computer-Based Medical Systems. CBMS 2001","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5063843258","display_name":"Yingdong Zhao","orcid":"https://orcid.org/0000-0002-8514-0293"},"institutions":[{"id":"https://openalex.org/I4210140884","display_name":"National Cancer Institute","ror":"https://ror.org/040gcmg81","country_code":"US","type":"government","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238","https://openalex.org/I4210140884"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Yingdong Zhao","raw_affiliation_strings":["Molecular Statistics and Bioinformatics Section Biometric Research Branch, National Cancer Institute, Rockville, MD, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Molecular Statistics and Bioinformatics Section Biometric Research Branch, National Cancer Institute, Rockville, MD, USA","institution_ids":["https://openalex.org/I4210140884"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5008240997","display_name":"Lawrence M. Grover","orcid":"https://orcid.org/0000-0001-6212-0911"},"institutions":[{"id":"https://openalex.org/I4210140884","display_name":"National Cancer Institute","ror":"https://ror.org/040gcmg81","country_code":"US","type":"government","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238","https://openalex.org/I4210140884"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"L. Grover","raw_affiliation_strings":["Molecular Statistics and Bioinformatics Section Biometric Research Branch, National Cancer Institute, Rockville, MD, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Molecular Statistics and Bioinformatics Section Biometric Research Branch, National Cancer Institute, Rockville, MD, USA","institution_ids":["https://openalex.org/I4210140884"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5101715307","display_name":"Richard Simon","orcid":"https://orcid.org/0000-0003-3558-4598"},"institutions":[{"id":"https://openalex.org/I4210140884","display_name":"National Cancer Institute","ror":"https://ror.org/040gcmg81","country_code":"US","type":"government","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238","https://openalex.org/I4210140884"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"R. Simon","raw_affiliation_strings":["Molecular Statistics and Bioinformatics Section Biometric Research Branch, National Cancer Institute, Rockville, MD, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Molecular Statistics and Bioinformatics Section Biometric Research Branch, National Cancer Institute, Rockville, MD, USA","institution_ids":["https://openalex.org/I4210140884"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I4210140884"],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":5,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":"5","issue":null,"first_page":"493","last_page":"497"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12576","display_name":"vaccines and immunoinformatics approaches","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12576","display_name":"vaccines and immunoinformatics approaches","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11016","display_name":"Monoclonal and Polyclonal Antibodies Research","score":0.9969000220298767,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10602","display_name":"Glycosylation and Glycoproteins Research","score":0.9968000054359436,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7336136698722839},{"id":"https://openalex.org/keywords/epitope","display_name":"Epitope","score":0.7302344441413879},{"id":"https://openalex.org/keywords/java","display_name":"Java","score":0.6022356748580933},{"id":"https://openalex.org/keywords/web-application","display_name":"Web application","score":0.558718740940094},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.4696233570575714},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.44847533106803894},{"id":"https://openalex.org/keywords/relational-database","display_name":"Relational database","score":0.4420667290687561},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3975411653518677},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.33299002051353455},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.3313967287540436},{"id":"https://openalex.org/keywords/antigen","display_name":"Antigen","score":0.31603628396987915},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.17861270904541016},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.13805419206619263},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.13673675060272217},{"id":"https://openalex.org/keywords/immunology","display_name":"Immunology","score":0.10877561569213867}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7336136698722839},{"id":"https://openalex.org/C195616568","wikidata":"https://www.wikidata.org/wiki/Q128711","display_name":"Epitope","level":3,"score":0.7302344441413879},{"id":"https://openalex.org/C548217200","wikidata":"https://www.wikidata.org/wiki/Q251","display_name":"Java","level":2,"score":0.6022356748580933},{"id":"https://openalex.org/C118643609","wikidata":"https://www.wikidata.org/wiki/Q189210","display_name":"Web application","level":2,"score":0.558718740940094},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.4696233570575714},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.44847533106803894},{"id":"https://openalex.org/C5655090","wikidata":"https://www.wikidata.org/wiki/Q192588","display_name":"Relational database","level":2,"score":0.4420667290687561},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3975411653518677},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.33299002051353455},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.3313967287540436},{"id":"https://openalex.org/C147483822","wikidata":"https://www.wikidata.org/wiki/Q103537","display_name":"Antigen","level":2,"score":0.31603628396987915},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.17861270904541016},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.13805419206619263},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.13673675060272217},{"id":"https://openalex.org/C203014093","wikidata":"https://www.wikidata.org/wiki/Q101929","display_name":"Immunology","level":1,"score":0.10877561569213867},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/cbms.2001.941767","is_oa":false,"landing_page_url":"https://doi.org/10.1109/cbms.2001.941767","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings 14th IEEE Symposium on Computer-Based Medical Systems. CBMS 2001","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3","score":0.4300000071525574}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":4,"referenced_works":["https://openalex.org/W1806734377","https://openalex.org/W2109906495","https://openalex.org/W2141824594","https://openalex.org/W6680919631"],"related_works":["https://openalex.org/W2021824670","https://openalex.org/W2009867644","https://openalex.org/W2363997565","https://openalex.org/W1981120125","https://openalex.org/W3036615648","https://openalex.org/W2408448169","https://openalex.org/W2182598264","https://openalex.org/W2075879923","https://openalex.org/W1978626146","https://openalex.org/W2060253881"],"abstract_inverted_index":{"Presents":[0],"the":[1,39,50,60,105,120],"World":[2],"Wide":[3],"Web-based":[4],"tool":[5,41,81],"TEST":[6,40,80],"(T-cell":[7],"Epitope":[8],"Search":[9],"Tool)":[10],"for":[11,104,119],"searching":[12],"T-cell":[13,89],"epitopes":[14],"based":[15],"on":[16],"experimental":[17],"data":[18,69,71,74],"from":[19],"positional":[20],"scanning":[21],"synthesized":[22],"combinatorial":[23],"libraries":[24],"(PS-SCL).":[25],"Implemented":[26],"with":[27,96],"a":[28,33,44,86],"strong":[29],"statistical":[30],"analysis":[31],"package,":[32],"relational":[34],"database":[35],"and":[36,47,54,73,115,117],"Java":[37],"applets,":[38],"first":[42],"generates":[43],"scoring":[45],"matrix":[46,51],"then":[48],"uses":[49],"to":[52,85],"scan":[53],"score":[55],"all":[56],"possible":[57],"peptides":[58],"in":[59,110],"user-specified":[61],"protein":[62],"database.":[63],"Laboratory":[64],"information":[65],"management,":[66],"such":[67],"as":[68],"storage,":[70],"retrieval":[72],"comparison,":[75],"is":[76],"also":[77,118],"provided.":[78],"The":[79,99],"has":[82],"been":[83],"applied":[84],"variety":[87],"of":[88,107,122],"clones":[90],"having":[91],"known":[92],"or":[93],"unknown":[94],"specificities":[95],"reliable":[97],"predictions.":[98],"system":[100],"should":[101],"prove":[102],"useful":[103],"identification":[106],"target":[108],"antigens":[109],"infectious":[111],"diseases,":[112],"autoimmune":[113],"disorders":[114],"tumors,":[116],"development":[121],"vaccines.":[123]},"counts_by_year":[{"year":2022,"cited_by_count":1},{"year":2012,"cited_by_count":1}],"updated_date":"2026-07-14T23:27:15.235271","created_date":"2025-10-10T00:00:00"}
