{"id":"https://openalex.org/W1994645690","doi":"https://doi.org/10.1109/bmei.2011.6098516","title":"Identifying disease genes from gene expression data based on singular value decomposition","display_name":"Identifying disease genes from gene expression data based on singular value decomposition","publication_year":2011,"publication_date":"2011-10-01","ids":{"openalex":"https://openalex.org/W1994645690","doi":"https://doi.org/10.1109/bmei.2011.6098516","mag":"1994645690"},"language":"en","primary_location":{"id":"doi:10.1109/bmei.2011.6098516","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bmei.2011.6098516","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2011 4th International Conference on Biomedical Engineering and Informatics (BMEI)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5082440926","display_name":"Huanping Zhang","orcid":null},"institutions":[{"id":"https://openalex.org/I167027274","display_name":"Nanjing Forestry University","ror":"https://ror.org/03m96p165","country_code":"CN","type":"education","lineage":["https://openalex.org/I167027274"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Huanping Zhang","raw_affiliation_strings":["College of Mechanical and Electronic Engineering, Nanjing Forestry University, Nanjing, China","College of Mechanical and Electronic Engineering, Nanjing Forestry University , Nanjing, China"],"affiliations":[{"raw_affiliation_string":"College of Mechanical and Electronic Engineering, Nanjing Forestry University, Nanjing, China","institution_ids":["https://openalex.org/I167027274"]},{"raw_affiliation_string":"College of Mechanical and Electronic Engineering, Nanjing Forestry University , Nanjing, China","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5013359542","display_name":"Xiaofeng Song","orcid":"https://orcid.org/0000-0001-7445-4302"},"institutions":[{"id":"https://openalex.org/I9842412","display_name":"Nanjing University of Aeronautics and Astronautics","ror":"https://ror.org/01scyh794","country_code":"CN","type":"education","lineage":["https://openalex.org/I9842412"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xiaofeng Song","raw_affiliation_strings":["Department of Biomedical Engineering, Nanjing University of Aeronautics and Astronautics, Nanjing, China"],"affiliations":[{"raw_affiliation_string":"Department of Biomedical Engineering, Nanjing University of Aeronautics and Astronautics, Nanjing, China","institution_ids":["https://openalex.org/I9842412"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5018475553","display_name":"Xiaobai Zhang","orcid":"https://orcid.org/0000-0002-7736-7666"},"institutions":[{"id":"https://openalex.org/I9842412","display_name":"Nanjing University of Aeronautics and Astronautics","ror":"https://ror.org/01scyh794","country_code":"CN","type":"education","lineage":["https://openalex.org/I9842412"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xiaobai Zhang","raw_affiliation_strings":["Department of Biomedical Engineering, Nanjing University of Aeronautics and Astronautics, Nanjing, China"],"affiliations":[{"raw_affiliation_string":"Department of Biomedical Engineering, Nanjing University of Aeronautics and Astronautics, Nanjing, China","institution_ids":["https://openalex.org/I9842412"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5082440926"],"corresponding_institution_ids":["https://openalex.org/I167027274"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.07046374,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"1","issue":null,"first_page":"1743","last_page":"1747"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9873999953269958,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9433000087738037,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/support-vector-machine","display_name":"Support vector machine","score":0.7475558519363403},{"id":"https://openalex.org/keywords/logistic-regression","display_name":"Logistic regression","score":0.6745249032974243},{"id":"https://openalex.org/keywords/discriminative-model","display_name":"Discriminative model","score":0.6211332082748413},{"id":"https://openalex.org/keywords/classifier","display_name":"Classifier (UML)","score":0.5981760621070862},{"id":"https://openalex.org/keywords/singular-value-decomposition","display_name":"Singular value decomposition","score":0.5854451656341553},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.5159071683883667},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.48985812067985535},{"id":"https://openalex.org/keywords/regression","display_name":"Regression","score":0.4881337583065033},{"id":"https://openalex.org/keywords/disease","display_name":"Disease","score":0.4861986041069031},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.45585593581199646},{"id":"https://openalex.org/keywords/microarray-analysis-techniques","display_name":"Microarray analysis techniques","score":0.4549401104450226},{"id":"https://openalex.org/keywords/cluster-analysis","display_name":"Cluster analysis","score":0.42683666944503784},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3961840569972992},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3886237144470215},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.38390520215034485},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.3025074005126953},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.276486337184906},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.2635905146598816},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.24674615263938904},{"id":"https://openalex.org/keywords/statistics","display_name":"Statistics","score":0.2236582636833191},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.2011500895023346},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.137539803981781},{"id":"https://openalex.org/keywords/pathology","display_name":"Pathology","score":0.07395964860916138}],"concepts":[{"id":"https://openalex.org/C12267149","wikidata":"https://www.wikidata.org/wiki/Q282453","display_name":"Support vector machine","level":2,"score":0.7475558519363403},{"id":"https://openalex.org/C151956035","wikidata":"https://www.wikidata.org/wiki/Q1132755","display_name":"Logistic regression","level":2,"score":0.6745249032974243},{"id":"https://openalex.org/C97931131","wikidata":"https://www.wikidata.org/wiki/Q5282087","display_name":"Discriminative model","level":2,"score":0.6211332082748413},{"id":"https://openalex.org/C95623464","wikidata":"https://www.wikidata.org/wiki/Q1096149","display_name":"Classifier (UML)","level":2,"score":0.5981760621070862},{"id":"https://openalex.org/C22789450","wikidata":"https://www.wikidata.org/wiki/Q420904","display_name":"Singular value decomposition","level":2,"score":0.5854451656341553},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.5159071683883667},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.48985812067985535},{"id":"https://openalex.org/C83546350","wikidata":"https://www.wikidata.org/wiki/Q1139051","display_name":"Regression","level":2,"score":0.4881337583065033},{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.4861986041069031},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.45585593581199646},{"id":"https://openalex.org/C8415881","wikidata":"https://www.wikidata.org/wiki/Q6839217","display_name":"Microarray analysis techniques","level":4,"score":0.4549401104450226},{"id":"https://openalex.org/C73555534","wikidata":"https://www.wikidata.org/wiki/Q622825","display_name":"Cluster analysis","level":2,"score":0.42683666944503784},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3961840569972992},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3886237144470215},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.38390520215034485},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.3025074005126953},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.276486337184906},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.2635905146598816},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.24674615263938904},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.2236582636833191},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.2011500895023346},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.137539803981781},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.07395964860916138}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/bmei.2011.6098516","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bmei.2011.6098516","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2011 4th International Conference on Biomedical Engineering and Informatics (BMEI)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/10","score":0.7900000214576721,"display_name":"Reduced inequalities"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320322769","display_name":"Natural Science Foundation of Jiangsu Province","ror":"https://ror.org/01h0zpd94"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":21,"referenced_works":["https://openalex.org/W1554590529","https://openalex.org/W1774711529","https://openalex.org/W1977908705","https://openalex.org/W1985849948","https://openalex.org/W2001650066","https://openalex.org/W2070040696","https://openalex.org/W2087684630","https://openalex.org/W2096863518","https://openalex.org/W2097169398","https://openalex.org/W2109363337","https://openalex.org/W2113654344","https://openalex.org/W2125015667","https://openalex.org/W2129208356","https://openalex.org/W2130395838","https://openalex.org/W2133462743","https://openalex.org/W2144018724","https://openalex.org/W2148541040","https://openalex.org/W2152844095","https://openalex.org/W2155236584","https://openalex.org/W2166874444","https://openalex.org/W2170798597"],"related_works":["https://openalex.org/W2965546495","https://openalex.org/W4389116644","https://openalex.org/W2153315159","https://openalex.org/W3103844505","https://openalex.org/W259157601","https://openalex.org/W4205463238","https://openalex.org/W2761785940","https://openalex.org/W1482209366","https://openalex.org/W2110523656","https://openalex.org/W1487808658"],"abstract_inverted_index":{"Identification":[0],"of":[1,10,22,54,60,89,97,103,113,128],"disease":[2,23,155],"genes":[3,80],"that":[4,34,81,138],"might":[5],"anticipate":[6],"the":[7,95,101,107],"clinical":[8],"behavior":[9],"human":[11],"cancers":[12],"is":[13,35,45,76,149],"very":[14],"important":[15],"for":[16,31,125],"understanding":[17],"cancer":[18,39],"pathogenesis.":[19],"Computational":[20],"analysis":[21],"gene":[24,32,120,134],"from":[25,41],"microarray":[26],"data":[27,136],"involves":[28],"a":[29,46,51,90,147],"search":[30],"subset":[33],"able":[36],"to":[37,50,57,78,93,106,153],"discriminate":[38],"samples":[40,55],"normal":[42],"samples,":[43],"which":[44],"challenging":[47],"task":[48],"due":[49],"small":[52],"number":[53,59,96],"compared":[56],"huge":[58],"genes.":[61,156],"In":[62],"this":[63],"paper,":[64],"an":[65,150],"algorithm":[66],"(LRSVD)":[67],"based":[68],"on":[69,132],"singular":[70,98],"value":[71,92],"decomposition":[72],"and":[73,116],"logistic":[74,114],"regression":[75,111],"proposed":[77],"find":[79],"are":[82],"associated":[83],"with":[84,141],"disease.":[85],"LRSVD":[86,139],"makes":[87],"use":[88],"threshold":[91],"control":[94],"vectors;":[99],"evaluates":[100],"contribution":[102],"each":[104,119],"eigengene":[105],"classifying":[108],"accuracy":[109],"by":[110,121],"coefficients":[112],"regression;":[115],"then":[117],"ranks":[118],"its":[122],"discriminative":[123],"power":[124],"two":[126],"kinds":[127],"samples.":[129],"The":[130],"results":[131],"colon":[133],"expression":[135],"indicate":[137],"method":[140,152],"support":[142],"vector":[143],"machine":[144],"(SVM)":[145],"as":[146],"classifier":[148],"encouraging":[151],"identify":[154]},"counts_by_year":[],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
