{"id":"https://openalex.org/W2144691700","doi":"https://doi.org/10.1109/biotechno.2008.23","title":"A Data Fusion Approach in Protein Homology Detection","display_name":"A Data Fusion Approach in Protein Homology Detection","publication_year":2008,"publication_date":"2008-06-01","ids":{"openalex":"https://openalex.org/W2144691700","doi":"https://doi.org/10.1109/biotechno.2008.23","mag":"2144691700"},"language":"en","primary_location":{"id":"doi:10.1109/biotechno.2008.23","is_oa":false,"landing_page_url":"https://doi.org/10.1109/biotechno.2008.23","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2008 International Conference on Biocomputation, Bioinformatics, and Biomedical Technologies","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5034655780","display_name":"Aydin Can Polatkan","orcid":null},"institutions":[{"id":"https://openalex.org/I8087733","display_name":"University of T\u00fcbingen","ror":"https://ror.org/03a1kwz48","country_code":"DE","type":"education","lineage":["https://openalex.org/I8087733"]},{"id":"https://openalex.org/I188740104","display_name":"Ba\u015fkent University","ror":"https://ror.org/02v9bqx10","country_code":"TR","type":"education","lineage":["https://openalex.org/I188740104"]}],"countries":["DE","TR"],"is_corresponding":true,"raw_author_name":"Aydin Can Polatkan","raw_affiliation_strings":["Department of Computer Engineering, Baskent University, Turkey","Wilhelm-Schickard-Institute, Universitat Tubingen, Germany"],"affiliations":[{"raw_affiliation_string":"Department of Computer Engineering, Baskent University, Turkey","institution_ids":["https://openalex.org/I188740104"]},{"raw_affiliation_string":"Wilhelm-Schickard-Institute, Universitat Tubingen, Germany","institution_ids":["https://openalex.org/I8087733"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5086873572","display_name":"Hasan O\u011ful","orcid":"https://orcid.org/0000-0002-6043-1860"},"institutions":[{"id":"https://openalex.org/I188740104","display_name":"Ba\u015fkent University","ror":"https://ror.org/02v9bqx10","country_code":"TR","type":"education","lineage":["https://openalex.org/I188740104"]}],"countries":["TR"],"is_corresponding":false,"raw_author_name":"Hasan Ogul","raw_affiliation_strings":["Department of Computer Engineering, Baskent University, Turkey"],"affiliations":[{"raw_affiliation_string":"Department of Computer Engineering, Baskent University, Turkey","institution_ids":["https://openalex.org/I188740104"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5090834002","display_name":"Hayri Sever","orcid":"https://orcid.org/0000-0002-8261-0675"},"institutions":[{"id":"https://openalex.org/I106245021","display_name":"\u00c7ankaya University","ror":"https://ror.org/056wqre19","country_code":"TR","type":"education","lineage":["https://openalex.org/I106245021"]}],"countries":["TR"],"is_corresponding":false,"raw_author_name":"Hayri Sever","raw_affiliation_strings":["Department of Computer Engineering, Cankaya University, Turkey"],"affiliations":[{"raw_affiliation_string":"Department of Computer Engineering, Cankaya University, Turkey","institution_ids":["https://openalex.org/I106245021"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5034655780"],"corresponding_institution_ids":["https://openalex.org/I188740104","https://openalex.org/I8087733"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.12593645,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"7","last_page":"12"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9961000084877014,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9951000213623047,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/support-vector-machine","display_name":"Support vector machine","score":0.804661750793457},{"id":"https://openalex.org/keywords/discriminative-model","display_name":"Discriminative model","score":0.7772306799888611},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.6638725996017456},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.6593963503837585},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.633734405040741},{"id":"https://openalex.org/keywords/fusion","display_name":"Fusion","score":0.6336190700531006},{"id":"https://openalex.org/keywords/benchmarking","display_name":"Benchmarking","score":0.5644583702087402},{"id":"https://openalex.org/keywords/homology","display_name":"Homology (biology)","score":0.4708021879196167},{"id":"https://openalex.org/keywords/fusion-protein","display_name":"Fusion protein","score":0.448780357837677},{"id":"https://openalex.org/keywords/sequence-homology","display_name":"Sequence homology","score":0.42665913701057434},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.32278692722320557},{"id":"https://openalex.org/keywords/peptide-sequence","display_name":"Peptide sequence","score":0.21692946553230286},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.14672988653182983},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.10342741012573242},{"id":"https://openalex.org/keywords/amino-acid","display_name":"Amino acid","score":0.07582321763038635}],"concepts":[{"id":"https://openalex.org/C12267149","wikidata":"https://www.wikidata.org/wiki/Q282453","display_name":"Support vector machine","level":2,"score":0.804661750793457},{"id":"https://openalex.org/C97931131","wikidata":"https://www.wikidata.org/wiki/Q5282087","display_name":"Discriminative model","level":2,"score":0.7772306799888611},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.6638725996017456},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.6593963503837585},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.633734405040741},{"id":"https://openalex.org/C158525013","wikidata":"https://www.wikidata.org/wiki/Q2593739","display_name":"Fusion","level":2,"score":0.6336190700531006},{"id":"https://openalex.org/C86251818","wikidata":"https://www.wikidata.org/wiki/Q816754","display_name":"Benchmarking","level":2,"score":0.5644583702087402},{"id":"https://openalex.org/C165525559","wikidata":"https://www.wikidata.org/wiki/Q224180","display_name":"Homology (biology)","level":3,"score":0.4708021879196167},{"id":"https://openalex.org/C123894998","wikidata":"https://www.wikidata.org/wiki/Q425158","display_name":"Fusion protein","level":4,"score":0.448780357837677},{"id":"https://openalex.org/C2779315201","wikidata":"https://www.wikidata.org/wiki/Q414601","display_name":"Sequence homology","level":4,"score":0.42665913701057434},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.32278692722320557},{"id":"https://openalex.org/C167625842","wikidata":"https://www.wikidata.org/wiki/Q899763","display_name":"Peptide sequence","level":3,"score":0.21692946553230286},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.14672988653182983},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.10342741012573242},{"id":"https://openalex.org/C515207424","wikidata":"https://www.wikidata.org/wiki/Q8066","display_name":"Amino acid","level":2,"score":0.07582321763038635},{"id":"https://openalex.org/C40767141","wikidata":"https://www.wikidata.org/wiki/Q285697","display_name":"Recombinant DNA","level":3,"score":0.0},{"id":"https://openalex.org/C162853370","wikidata":"https://www.wikidata.org/wiki/Q39809","display_name":"Marketing","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C144133560","wikidata":"https://www.wikidata.org/wiki/Q4830453","display_name":"Business","level":0,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/biotechno.2008.23","is_oa":false,"landing_page_url":"https://doi.org/10.1109/biotechno.2008.23","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2008 International Conference on Biocomputation, Bioinformatics, and Biomedical Technologies","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/10","score":0.7799999713897705,"display_name":"Reduced inequalities"}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":16,"referenced_works":["https://openalex.org/W1973714307","https://openalex.org/W2022247199","https://openalex.org/W2055043387","https://openalex.org/W2058336694","https://openalex.org/W2084787613","https://openalex.org/W2085277871","https://openalex.org/W2086204534","https://openalex.org/W2087064593","https://openalex.org/W2097892623","https://openalex.org/W2101220662","https://openalex.org/W2109109045","https://openalex.org/W2140244239","https://openalex.org/W2142375194","https://openalex.org/W2158714788","https://openalex.org/W2283504545","https://openalex.org/W4236236547"],"related_works":["https://openalex.org/W2373327015","https://openalex.org/W2365352214","https://openalex.org/W2034554207","https://openalex.org/W2386533626","https://openalex.org/W3151890006","https://openalex.org/W2370259341","https://openalex.org/W2163211634","https://openalex.org/W2387627227","https://openalex.org/W2084391532","https://openalex.org/W2464792902"],"abstract_inverted_index":{"The":[0,35],"discriminative":[1],"framework":[2],"for":[3,49],"protein":[4,51],"remote":[5],"homology":[6],"detection":[7],"based":[8,21],"on":[9,55,77],"support":[10],"vector":[11],"machines":[12],"(SVMs)":[13],"is":[14],"reconstructed":[15],"by":[16],"the":[17,63],"fusion":[18,64],"of":[19],"sequence":[20],"features.":[22],"In":[23],"this":[24],"respect,":[25],"n-peptide":[26],"compositions":[27],"are":[28,38],"partitioned":[29],"and":[30,43],"fed":[31],"into":[32],"separate":[33],"SVMs.":[34],"SVM":[36],"outputs":[37],"evaluated":[39],"with":[40,73],"different":[41],"techniques":[42],"tested":[44],"to":[45,67],"discern":[46],"their":[47],"ability":[48],"SCOP":[50],"super":[52],"family":[53],"classification":[54],"a":[56,74],"common":[57],"benchmarking":[58],"set.":[59],"It":[60],"reveals":[61],"that":[62],"approach":[65],"leads":[66],"an":[68],"improvement":[69],"in":[70],"prediction":[71],"accuracy":[72],"remarkable":[75],"gain":[76],"computer":[78],"memory":[79],"usage.":[80]},"counts_by_year":[],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
