{"id":"https://openalex.org/W4406461504","doi":"https://doi.org/10.1109/bigdata62323.2024.10825729","title":"FPP-Hunter: Expert-Guided Discovery Of Functional Path Patterns","display_name":"FPP-Hunter: Expert-Guided Discovery Of Functional Path Patterns","publication_year":2024,"publication_date":"2024-12-15","ids":{"openalex":"https://openalex.org/W4406461504","doi":"https://doi.org/10.1109/bigdata62323.2024.10825729"},"language":"en","primary_location":{"id":"doi:10.1109/bigdata62323.2024.10825729","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bigdata62323.2024.10825729","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2024 IEEE International Conference on Big Data (BigData)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5001438691","display_name":"Daniel Korn","orcid":"https://orcid.org/0000-0002-1780-9872"},"institutions":[{"id":"https://openalex.org/I114027177","display_name":"University of North Carolina at Chapel Hill","ror":"https://ror.org/0130frc33","country_code":"US","type":"education","lineage":["https://openalex.org/I114027177"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Daniel Korn","raw_affiliation_strings":["University of North Carolina at Chapel Hill,Chapel Hill,North Carolina,USA"],"affiliations":[{"raw_affiliation_string":"University of North Carolina at Chapel Hill,Chapel Hill,North Carolina,USA","institution_ids":["https://openalex.org/I114027177"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5069406546","display_name":"Jon-Michael Beasley","orcid":"https://orcid.org/0000-0002-2957-8792"},"institutions":[{"id":"https://openalex.org/I114027177","display_name":"University of North Carolina at Chapel Hill","ror":"https://ror.org/0130frc33","country_code":"US","type":"education","lineage":["https://openalex.org/I114027177"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jon-Michael Beasley","raw_affiliation_strings":["University of North Carolina at Chapel Hill,Chapel Hill,North Carolina,USA"],"affiliations":[{"raw_affiliation_string":"University of North Carolina at Chapel Hill,Chapel Hill,North Carolina,USA","institution_ids":["https://openalex.org/I114027177"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5045531668","display_name":"Kara Schatz","orcid":"https://orcid.org/0000-0003-2310-5131"},"institutions":[{"id":"https://openalex.org/I137902535","display_name":"North Carolina State University","ror":"https://ror.org/04tj63d06","country_code":"US","type":"education","lineage":["https://openalex.org/I137902535"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Kara Schatz","raw_affiliation_strings":["North Carolina State University,Raleigh,North Carolina,USA"],"affiliations":[{"raw_affiliation_string":"North Carolina State University,Raleigh,North Carolina,USA","institution_ids":["https://openalex.org/I137902535"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5115064219","display_name":"Pei-Yu Hou","orcid":"https://orcid.org/0000-0001-5429-476X"},"institutions":[{"id":"https://openalex.org/I137902535","display_name":"North Carolina State University","ror":"https://ror.org/04tj63d06","country_code":"US","type":"education","lineage":["https://openalex.org/I137902535"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Pei-Yu Hou","raw_affiliation_strings":["North Carolina State University,Raleigh,North Carolina,USA"],"affiliations":[{"raw_affiliation_string":"North Carolina State University,Raleigh,North Carolina,USA","institution_ids":["https://openalex.org/I137902535"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5078536199","display_name":"Alexander Tropsha","orcid":"https://orcid.org/0000-0003-3802-8896"},"institutions":[{"id":"https://openalex.org/I114027177","display_name":"University of North Carolina at Chapel Hill","ror":"https://ror.org/0130frc33","country_code":"US","type":"education","lineage":["https://openalex.org/I114027177"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Alexander Tropsha","raw_affiliation_strings":["University of North Carolina at Chapel Hill,Chapel Hill,North Carolina,USA"],"affiliations":[{"raw_affiliation_string":"University of North Carolina at Chapel Hill,Chapel Hill,North Carolina,USA","institution_ids":["https://openalex.org/I114027177"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5078910758","display_name":"Rada Chirkova","orcid":"https://orcid.org/0000-0003-4249-9690"},"institutions":[{"id":"https://openalex.org/I137902535","display_name":"North Carolina State University","ror":"https://ror.org/04tj63d06","country_code":"US","type":"education","lineage":["https://openalex.org/I137902535"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Rada Chirkova","raw_affiliation_strings":["North Carolina State University,Raleigh,North Carolina,USA"],"affiliations":[{"raw_affiliation_string":"North Carolina State University,Raleigh,North Carolina,USA","institution_ids":["https://openalex.org/I137902535"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5001438691"],"corresponding_institution_ids":["https://openalex.org/I114027177"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.22177121,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"4023","last_page":"4032"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9839000105857849,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9839000105857849,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10799","display_name":"Data Visualization and Analytics","score":0.980400025844574,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11063","display_name":"Rough Sets and Fuzzy Logic","score":0.9746999740600586,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6519549489021301},{"id":"https://openalex.org/keywords/path","display_name":"Path (computing)","score":0.6274040341377258},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.11127036809921265}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6519549489021301},{"id":"https://openalex.org/C2777735758","wikidata":"https://www.wikidata.org/wiki/Q817765","display_name":"Path (computing)","level":2,"score":0.6274040341377258},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.11127036809921265}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/bigdata62323.2024.10825729","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bigdata62323.2024.10825729","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2024 IEEE International Conference on Big Data (BigData)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":36,"referenced_works":["https://openalex.org/W1606357646","https://openalex.org/W2011726136","https://openalex.org/W2029017735","https://openalex.org/W2120303002","https://openalex.org/W2153504150","https://openalex.org/W2154851992","https://openalex.org/W2187089797","https://openalex.org/W2743104969","https://openalex.org/W2750303327","https://openalex.org/W2767891136","https://openalex.org/W2802532163","https://openalex.org/W2896002881","https://openalex.org/W2918518506","https://openalex.org/W2962756421","https://openalex.org/W2963224980","https://openalex.org/W2968353232","https://openalex.org/W3005925976","https://openalex.org/W3010336026","https://openalex.org/W3022514719","https://openalex.org/W3030709095","https://openalex.org/W3104097132","https://openalex.org/W3127311830","https://openalex.org/W4211123915","https://openalex.org/W4212931201","https://openalex.org/W4247714388","https://openalex.org/W4282593722","https://openalex.org/W4295198017","https://openalex.org/W4302339081","https://openalex.org/W4386254278","https://openalex.org/W4389104801","https://openalex.org/W4390242417","https://openalex.org/W4391147364","https://openalex.org/W4398234827","https://openalex.org/W6636400922","https://openalex.org/W6678914141","https://openalex.org/W7026878154"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2899084033","https://openalex.org/W2748952813","https://openalex.org/W2390279801","https://openalex.org/W4391913857","https://openalex.org/W2358668433","https://openalex.org/W4396701345","https://openalex.org/W2376932109","https://openalex.org/W2001405890","https://openalex.org/W4396696052"],"abstract_inverted_index":{"In":[0],"the":[1,23,80,87,91,115,131,137,141],"context":[2],"of":[3,25,49,75,82,93,121],"using":[4,152],"big":[5],"data":[6],"to":[7,43,67,143],"improve":[8],"healthcare":[9],"and":[10,13,47,55,98,113,158],"life":[11],"sciences":[12],"with":[14,130],"a":[15,122],"specific":[16,35,38],"focus":[17],"on":[18,57,72],"drug":[19,53,156],"discovery,":[20],"we":[21,65,127],"consider":[22],"problem":[24,70],"formulating":[26],"biomedical":[27,59,132],"mechanism-of-action":[28],"(MOA)":[29],"hypotheses":[30,51,78,151],"that":[31,64,104,126,136],"can":[32],"explain":[33],"how":[34],"drugs":[36,97],"treat":[37],"diseases.":[39,99],"Our":[40],"aim":[41],"is":[42],"enable":[44],"scalable":[45],"mining":[46],"interpretation":[48],"MOA":[50,77,150],"enabling":[52],"discovery":[54],"repurposing":[56,157],"large-scale":[58,153],"knowledge":[60],"graphs":[61],"(KGs).The":[62],"approach":[63,117,139],"introduce":[66],"address":[68,144],"this":[69],"centers":[71],"expert-guided":[73],"generation":[74],"candidate":[76,107],"in":[79,147,155],"form":[81],"regular-path":[83],"KG":[84,88,133],"patterns":[85,103,111],"between":[86],"nodes":[89],"for":[90],"entities":[92],"interest,":[94],"such":[95],"as":[96],"We":[100],"call":[101,114],"those":[102],"represent":[105],"promising":[106,149],"MOAs":[108],"functional":[109],"path":[110],"(FPPs),":[112],"proposed":[116,138],"FPP-Hunter.":[118],"The":[119],"results":[120],"drug-disease":[123],"case":[124],"study":[125],"have":[128],"conducted":[129],"ROBOKOP":[134],"suggest":[135],"has":[140],"potential":[142],"scalability":[145],"challenges":[146],"forming":[148],"KGs,":[154],"potentially":[159],"beyond.":[160]},"counts_by_year":[],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
