{"id":"https://openalex.org/W4406495757","doi":"https://doi.org/10.1109/bigdata62323.2024.10825266","title":"ClinicSum: Utilizing Language Models for Generating Clinical Summaries from Patient-Doctor Conversations","display_name":"ClinicSum: Utilizing Language Models for Generating Clinical Summaries from Patient-Doctor Conversations","publication_year":2024,"publication_date":"2024-12-15","ids":{"openalex":"https://openalex.org/W4406495757","doi":"https://doi.org/10.1109/bigdata62323.2024.10825266","pmid":"https://pubmed.ncbi.nlm.nih.gov/40919371"},"language":"en","primary_location":{"id":"doi:10.1109/bigdata62323.2024.10825266","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bigdata62323.2024.10825266","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2024 IEEE International Conference on Big Data (BigData)","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC12412407/pdf/nihms-2106779.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5083240694","display_name":"Subash Neupane","orcid":"https://orcid.org/0000-0001-9260-3914"},"institutions":[{"id":"https://openalex.org/I99041443","display_name":"Mississippi State University","ror":"https://ror.org/0432jq872","country_code":"US","type":"education","lineage":["https://openalex.org/I4210141039","https://openalex.org/I99041443"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Subash Neupane","raw_affiliation_strings":["Mississippi State University Potentia Analytics Inc.,Dept. of Computer Science and Engineering"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Mississippi State University Potentia Analytics Inc.,Dept. of Computer Science and Engineering","institution_ids":["https://openalex.org/I99041443"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5098625349","display_name":"Himanshu Tripathi","orcid":null},"institutions":[{"id":"https://openalex.org/I99041443","display_name":"Mississippi State University","ror":"https://ror.org/0432jq872","country_code":"US","type":"education","lineage":["https://openalex.org/I4210141039","https://openalex.org/I99041443"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Himanshu Tripathi","raw_affiliation_strings":["Mississippi State University Potentia Analytics Inc.,Dept. of Computer Science and Engineering"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Mississippi State University Potentia Analytics Inc.,Dept. of Computer Science and Engineering","institution_ids":["https://openalex.org/I99041443"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5075202853","display_name":"Shaswata Mitra","orcid":"https://orcid.org/0009-0002-9722-5312"},"institutions":[{"id":"https://openalex.org/I99041443","display_name":"Mississippi State University","ror":"https://ror.org/0432jq872","country_code":"US","type":"education","lineage":["https://openalex.org/I4210141039","https://openalex.org/I99041443"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Shaswata Mitra","raw_affiliation_strings":["Mississippi State University Potentia Analytics Inc.,Dept. of Computer Science and Engineering"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Mississippi State University Potentia Analytics Inc.,Dept. of Computer Science and Engineering","institution_ids":["https://openalex.org/I99041443"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5048925324","display_name":"Sean Bozorgzad","orcid":null},"institutions":[{"id":"https://openalex.org/I99041443","display_name":"Mississippi State University","ror":"https://ror.org/0432jq872","country_code":"US","type":"education","lineage":["https://openalex.org/I4210141039","https://openalex.org/I99041443"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Sean Bozorgzad","raw_affiliation_strings":["Mississippi State University Potentia Analytics Inc.,Dept. of Computer Science and Engineering"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Mississippi State University Potentia Analytics Inc.,Dept. of Computer Science and Engineering","institution_ids":["https://openalex.org/I99041443"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5074949168","display_name":"Sudip Mittal","orcid":"https://orcid.org/0000-0001-9151-8347"},"institutions":[{"id":"https://openalex.org/I99041443","display_name":"Mississippi State University","ror":"https://ror.org/0432jq872","country_code":"US","type":"education","lineage":["https://openalex.org/I4210141039","https://openalex.org/I99041443"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Sudip Mittal","raw_affiliation_strings":["Mississippi State University Potentia Analytics Inc.,Dept. of Computer Science and Engineering"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Mississippi State University Potentia Analytics Inc.,Dept. of Computer Science and Engineering","institution_ids":["https://openalex.org/I99041443"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5009452693","display_name":"Shahram Rahimi","orcid":"https://orcid.org/0000-0003-2779-0076"},"institutions":[{"id":"https://openalex.org/I99041443","display_name":"Mississippi State University","ror":"https://ror.org/0432jq872","country_code":"US","type":"education","lineage":["https://openalex.org/I4210141039","https://openalex.org/I99041443"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Shahram Rahimi","raw_affiliation_strings":["Mississippi State University Potentia Analytics Inc.,Dept. of Computer Science and Engineering"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Mississippi State University Potentia Analytics Inc.,Dept. of Computer Science and Engineering","institution_ids":["https://openalex.org/I99041443"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5011806403","display_name":"Amin Amirlatifi","orcid":"https://orcid.org/0000-0002-2225-2087"},"institutions":[{"id":"https://openalex.org/I99041443","display_name":"Mississippi State University","ror":"https://ror.org/0432jq872","country_code":"US","type":"education","lineage":["https://openalex.org/I4210141039","https://openalex.org/I99041443"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Amin Amirlatifi","raw_affiliation_strings":["Mississippi State University Potentia Analytics Inc.,Dept. of Computer Science and Engineering"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Mississippi State University Potentia Analytics Inc.,Dept. of Computer Science and Engineering","institution_ids":["https://openalex.org/I99041443"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I99041443"],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":true,"cited_by_count":7,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":"2024","issue":null,"first_page":"5050","last_page":"5059"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9979000091552734,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10181","display_name":"Natural Language Processing Techniques","score":0.9955999851226807,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6958870887756348},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.5488279461860657},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.397480845451355},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.33660441637039185}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6958870887756348},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.5488279461860657},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.397480845451355},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.33660441637039185}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1109/bigdata62323.2024.10825266","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bigdata62323.2024.10825266","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2024 IEEE International Conference on Big Data (BigData)","raw_type":"proceedings-article"},{"id":"pmid:40919371","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/40919371","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings : ... IEEE International Conference on Big Data. IEEE International Conference on Big Data","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:12412407","is_oa":true,"landing_page_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC12412407/","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC12412407/pdf/nihms-2106779.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Proc IEEE Int Conf Big Data","raw_type":"Text"}],"best_oa_location":{"id":"pmh:oai:pubmedcentral.nih.gov:12412407","is_oa":true,"landing_page_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC12412407/","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC12412407/pdf/nihms-2106779.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Proc IEEE Int Conf Big Data","raw_type":"Text"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/4","score":0.7699999809265137,"display_name":"Quality Education"}],"awards":[{"id":"https://openalex.org/G6331342239","display_name":null,"funder_award_id":"R41 NR021089","funder_id":"https://openalex.org/F4320337353","funder_display_name":"National Institute of Nursing Research"}],"funders":[{"id":"https://openalex.org/F4320309637","display_name":"Mississippi State University","ror":"https://ror.org/0432jq872"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320337353","display_name":"National Institute of Nursing Research","ror":"https://ror.org/01y3zfr79"}],"has_content":{"grobid_xml":false,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4406495757.pdf"},"referenced_works_count":49,"referenced_works":["https://openalex.org/W13410520","https://openalex.org/W1975079199","https://openalex.org/W2118880100","https://openalex.org/W2148972377","https://openalex.org/W2154652894","https://openalex.org/W2463189693","https://openalex.org/W2515682654","https://openalex.org/W2560647685","https://openalex.org/W2612560781","https://openalex.org/W2806237610","https://openalex.org/W2889984458","https://openalex.org/W2891022667","https://openalex.org/W2936695845","https://openalex.org/W2949530332","https://openalex.org/W3027879771","https://openalex.org/W3045635560","https://openalex.org/W3099700870","https://openalex.org/W3168867926","https://openalex.org/W3177464472","https://openalex.org/W3201710275","https://openalex.org/W4205991051","https://openalex.org/W4224223051","https://openalex.org/W4287887173","https://openalex.org/W4292779060","https://openalex.org/W4294214983","https://openalex.org/W4378509449","https://openalex.org/W4382246105","https://openalex.org/W4385245566","https://openalex.org/W4385571397","https://openalex.org/W4385573908","https://openalex.org/W4386566659","https://openalex.org/W4386566731","https://openalex.org/W4387596421","https://openalex.org/W4388937234","https://openalex.org/W4393299232","https://openalex.org/W4404534210","https://openalex.org/W4405674063","https://openalex.org/W6600544719","https://openalex.org/W6628905179","https://openalex.org/W6682631176","https://openalex.org/W6759579507","https://openalex.org/W6761205521","https://openalex.org/W6777615688","https://openalex.org/W6778883912","https://openalex.org/W6780571479","https://openalex.org/W6796581206","https://openalex.org/W6853251322","https://openalex.org/W6857026196","https://openalex.org/W6863126066"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2899084033","https://openalex.org/W2748952813","https://openalex.org/W2390279801","https://openalex.org/W4391913857","https://openalex.org/W2358668433","https://openalex.org/W4396701345","https://openalex.org/W2376932109","https://openalex.org/W2001405890","https://openalex.org/W3204019825"],"abstract_inverted_index":{"This":[0],"paper":[1],"presents":[2],"ClinicSum,":[3],"a":[4,18,21,65,135],"novel":[5],"framework":[6],"designed":[7],"to":[8,54],"automatically":[9],"generate":[10,55],"clinical":[11,57,140],"summaries":[12,85],"from":[13,34,128],"patient-doctor":[14],"conversations.":[15],"It":[16],"utilizes":[17],"two-module":[19],"architecture:":[20],"retrieval-based":[22],"filtering":[23],"module":[24,40],"that":[25,109],"extracts":[26],"Subjective,":[27],"Objective,":[28],"Assessment,":[29],"and":[30,37,80,103,118,124],"Plan":[31],"(SOAP)":[32],"information":[33],"conversation":[35],"transcripts,":[36],"an":[38],"inference":[39],"powered":[41],"by":[42,73,87],"fine-tuned":[43],"Pre-trained":[44],"Language":[45],"Models":[46],"(PLMs),":[47],"which":[48],"leverage":[49],"the":[50,61],"extracted":[51],"SOAP":[52],"data":[53],"abstracted":[56],"summaries.":[58],"To":[59],"fine-tune":[60],"PLM,":[62],"we":[63],"created":[64],"training":[66],"dataset":[67],"of":[68],"consisting":[69],"1,473":[70],"conversations-summaries":[71],"pair":[72],"consolidating":[74],"two":[75],"publicly":[76],"available":[77],"datasets,":[78],"FigShare":[79],"MTS-Dialog,":[81],"with":[82],"ground":[83],"truth":[84],"validated":[86],"Subject":[88],"Matter":[89],"Experts":[90],"(SMEs).":[91],"ClinicSum's":[92],"effectiveness":[93],"is":[94],"evaluated":[95],"through":[96],"both":[97],"automatic":[98,122],"metrics":[99],"(e.g.,":[100],"ROUGE,":[101],"BERTScore)":[102],"expert":[104],"human":[105,131],"assessments.":[106],"Results":[107],"show":[108],"ClinicSum":[110],"outperforms":[111],"state-of-the-art":[112],"PLMs,":[113],"demonstrating":[114],"superior":[115],"precision,":[116],"recall,":[117],"F-1":[119],"scores":[120],"in":[121,130],"evaluations":[123],"receiving":[125],"high":[126],"preference":[127],"SMEs":[129],"assessment,":[132],"making":[133],"it":[134],"robust":[136],"solution":[137],"for":[138],"automated":[139],"summarization.":[141]},"counts_by_year":[{"year":2026,"cited_by_count":4},{"year":2025,"cited_by_count":3}],"updated_date":"2026-07-14T23:27:15.235271","created_date":"2025-10-10T00:00:00"}
