{"id":"https://openalex.org/W2199976536","doi":"https://doi.org/10.1109/bigdata.2015.7364124","title":"Using pairwise difference features to measure temporal changes in the microbial ecology","display_name":"Using pairwise difference features to measure temporal changes in the microbial ecology","publication_year":2015,"publication_date":"2015-10-01","ids":{"openalex":"https://openalex.org/W2199976536","doi":"https://doi.org/10.1109/bigdata.2015.7364124","mag":"2199976536"},"language":"en","primary_location":{"id":"doi:10.1109/bigdata.2015.7364124","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bigdata.2015.7364124","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2015 IEEE International Conference on Big Data (Big Data)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5115598388","display_name":"Mohammad Reza Yazdani","orcid":"https://orcid.org/0000-0002-7153-2405"},"institutions":[{"id":"https://openalex.org/I36258959","display_name":"University of California, San Diego","ror":"https://ror.org/0168r3w48","country_code":"US","type":"education","lineage":["https://openalex.org/I36258959"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"M. Yazdani","raw_affiliation_strings":["California Institute for Telecommunications and Information Technology, University of California, San Diego, USA"],"affiliations":[{"raw_affiliation_string":"California Institute for Telecommunications and Information Technology, University of California, San Diego, USA","institution_ids":["https://openalex.org/I36258959"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5070236619","display_name":"Larry Smarr","orcid":"https://orcid.org/0000-0003-2003-7700"},"institutions":[{"id":"https://openalex.org/I36258959","display_name":"University of California, San Diego","ror":"https://ror.org/0168r3w48","country_code":"US","type":"education","lineage":["https://openalex.org/I36258959"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"L. Smarr","raw_affiliation_strings":["Department of Computer Science and Engineering, University of California, San Diego, USA"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, University of California, San Diego, USA","institution_ids":["https://openalex.org/I36258959"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5115598388"],"corresponding_institution_ids":["https://openalex.org/I36258959"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.06918671,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"27","issue":null,"first_page":"2925","last_page":"2927"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10066","display_name":"Gut microbiota and health","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10066","display_name":"Gut microbiota and health","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10134","display_name":"Inflammatory Bowel Disease","score":0.9951000213623047,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13569","display_name":"Microscopic Colitis","score":0.9776999950408936,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/microbiome","display_name":"Microbiome","score":0.7803090810775757},{"id":"https://openalex.org/keywords/microbial-ecology","display_name":"Microbial ecology","score":0.7647435665130615},{"id":"https://openalex.org/keywords/organism","display_name":"Organism","score":0.7208096981048584},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.6789265871047974},{"id":"https://openalex.org/keywords/ecology","display_name":"Ecology","score":0.6577351093292236},{"id":"https://openalex.org/keywords/relative-species-abundance","display_name":"Relative species abundance","score":0.5217407941818237},{"id":"https://openalex.org/keywords/human-microbiome","display_name":"Human microbiome","score":0.5147126317024231},{"id":"https://openalex.org/keywords/evolutionary-ecology","display_name":"Evolutionary ecology","score":0.4824953079223633},{"id":"https://openalex.org/keywords/metagenomics","display_name":"Metagenomics","score":0.44720613956451416},{"id":"https://openalex.org/keywords/evolutionary-biology","display_name":"Evolutionary biology","score":0.44110631942749023},{"id":"https://openalex.org/keywords/abundance","display_name":"Abundance (ecology)","score":0.43064582347869873},{"id":"https://openalex.org/keywords/model-organism","display_name":"Model organism","score":0.41245365142822266},{"id":"https://openalex.org/keywords/bacteria","display_name":"Bacteria","score":0.21451044082641602},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.13017135858535767},{"id":"https://openalex.org/keywords/host","display_name":"Host (biology)","score":0.12411728501319885},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.09872326254844666}],"concepts":[{"id":"https://openalex.org/C143121216","wikidata":"https://www.wikidata.org/wiki/Q1330402","display_name":"Microbiome","level":2,"score":0.7803090810775757},{"id":"https://openalex.org/C69562835","wikidata":"https://www.wikidata.org/wiki/Q3054637","display_name":"Microbial ecology","level":3,"score":0.7647435665130615},{"id":"https://openalex.org/C137858568","wikidata":"https://www.wikidata.org/wiki/Q7239","display_name":"Organism","level":2,"score":0.7208096981048584},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.6789265871047974},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.6577351093292236},{"id":"https://openalex.org/C122325731","wikidata":"https://www.wikidata.org/wiki/Q3738459","display_name":"Relative species abundance","level":3,"score":0.5217407941818237},{"id":"https://openalex.org/C91478284","wikidata":"https://www.wikidata.org/wiki/Q6623796","display_name":"Human microbiome","level":3,"score":0.5147126317024231},{"id":"https://openalex.org/C135811302","wikidata":"https://www.wikidata.org/wiki/Q1382557","display_name":"Evolutionary ecology","level":3,"score":0.4824953079223633},{"id":"https://openalex.org/C15151743","wikidata":"https://www.wikidata.org/wiki/Q903778","display_name":"Metagenomics","level":3,"score":0.44720613956451416},{"id":"https://openalex.org/C78458016","wikidata":"https://www.wikidata.org/wiki/Q840400","display_name":"Evolutionary biology","level":1,"score":0.44110631942749023},{"id":"https://openalex.org/C77077793","wikidata":"https://www.wikidata.org/wiki/Q336019","display_name":"Abundance (ecology)","level":2,"score":0.43064582347869873},{"id":"https://openalex.org/C19843653","wikidata":"https://www.wikidata.org/wiki/Q213907","display_name":"Model organism","level":3,"score":0.41245365142822266},{"id":"https://openalex.org/C523546767","wikidata":"https://www.wikidata.org/wiki/Q10876","display_name":"Bacteria","level":2,"score":0.21451044082641602},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.13017135858535767},{"id":"https://openalex.org/C126831891","wikidata":"https://www.wikidata.org/wiki/Q221673","display_name":"Host (biology)","level":2,"score":0.12411728501319885},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.09872326254844666}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/bigdata.2015.7364124","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bigdata.2015.7364124","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2015 IEEE International Conference on Big Data (Big Data)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/15","score":0.4699999988079071,"display_name":"Life in Land"},{"id":"https://metadata.un.org/sdg/12","score":0.4399999976158142,"display_name":"Responsible consumption and production"}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":2,"referenced_works":["https://openalex.org/W2145979309","https://openalex.org/W3106063097"],"related_works":["https://openalex.org/W4225116231","https://openalex.org/W4363675773","https://openalex.org/W1989126654","https://openalex.org/W4248196518","https://openalex.org/W4247214458","https://openalex.org/W1826127131","https://openalex.org/W1991914516","https://openalex.org/W4211085925","https://openalex.org/W4211050929","https://openalex.org/W2889137638"],"abstract_inverted_index":{"The":[0,66,118,162],"exponential":[1],"affordability":[2],"of":[3,16,27,61,73,80,108,124,128,132,136,152,175],"DNA":[4],"sequencing":[5,15],"technologies":[6],"has":[7,41],"enabled":[8],"not":[9,52],"only":[10],"the":[11,17,21,31,35,38,45,48,71,98,129,149,173,176],"accessible":[12],"and":[13,30,63,83,86,169],"rapid":[14],"human":[18,39,49,64,89],"genome,":[19],"but":[20,56],"opportunity":[22],"to":[23,44,70,92,158,179],"sequence":[24],"vast":[25],"numbers":[26],"multi-cellular":[28],"organism":[29,55],"tiniest":[32],"microbes.":[33],"Studying":[34],"microbes":[36,62],"in":[37,75,105,140,148,166,172],"body":[40,50,77],"led":[42],"us":[43],"view":[46],"that":[47,97,138,146],"is":[51,68],"a":[53,58,102,106,126,133,153,159,180],"single":[54],"rather":[57],"symbiotic":[59],"ecology":[60,120,156,177],"cells.":[65],"microbiome":[67,99,119],"referred":[69],"collection":[72],"microorganisms":[74],"our":[76,88,141],"(consisting":[78],"mostly":[79],"bacteria,":[81],"archaea,":[82],"some":[84],"eukarya)":[85],"outnumber":[87],"cells":[90],"ten":[91],"one.":[93],"Numerous":[94,143],"studies":[95,144],"suggest":[96,145],"may":[100],"play":[101],"critical":[103],"role":[104],"number":[107,135],"autoimmune":[109],"diseases,":[110],"with":[111],"most":[112],"research":[113],"on":[114],"inflammatory":[115],"bowel":[116],"disease.":[117],"can":[121],"be":[122],"thought":[123],"as":[125],"composition":[127,174],"relative":[130,150],"abundance":[131,151],"large":[134],"organisms":[137],"reside":[139],"bodies.":[142],"disruptions":[147],"healthy":[154],"microbial":[155],"leads":[157,178],"disease":[160,181],"state.":[161,182],"challenge":[163],"remains,":[164],"however,":[165],"understanding":[167],"how":[168],"what":[170],"changes":[171]},"counts_by_year":[],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
