{"id":"https://openalex.org/W2025776273","doi":"https://doi.org/10.1109/bigdata.2014.7004485","title":"Enabling genomic analysis on federated clouds","display_name":"Enabling genomic analysis on federated clouds","publication_year":2014,"publication_date":"2014-10-01","ids":{"openalex":"https://openalex.org/W2025776273","doi":"https://doi.org/10.1109/bigdata.2014.7004485","mag":"2025776273"},"language":"en","primary_location":{"id":"doi:10.1109/bigdata.2014.7004485","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bigdata.2014.7004485","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2014 IEEE International Conference on Big Data (Big Data)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100688757","display_name":"Fan Jiang","orcid":"https://orcid.org/0000-0002-9867-7639"},"institutions":[{"id":"https://openalex.org/I69048370","display_name":"Renaissance Computing Institute","ror":"https://ror.org/01s91ey96","country_code":"US","type":"education","lineage":["https://openalex.org/I137902535","https://openalex.org/I170897317","https://openalex.org/I69048370"]},{"id":"https://openalex.org/I114027177","display_name":"University of North Carolina at Chapel Hill","ror":"https://ror.org/0130frc33","country_code":"US","type":"education","lineage":["https://openalex.org/I114027177"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Fan Jiang","raw_affiliation_strings":["Renaissance Computing Institute, University of North Carolina at Chapel Hill, Chapel Hill, USA"],"affiliations":[{"raw_affiliation_string":"Renaissance Computing Institute, University of North Carolina at Chapel Hill, Chapel Hill, USA","institution_ids":["https://openalex.org/I69048370","https://openalex.org/I114027177"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5026337140","display_name":"Michael Shoffner","orcid":null},"institutions":[{"id":"https://openalex.org/I114027177","display_name":"University of North Carolina at Chapel Hill","ror":"https://ror.org/0130frc33","country_code":"US","type":"education","lineage":["https://openalex.org/I114027177"]},{"id":"https://openalex.org/I69048370","display_name":"Renaissance Computing Institute","ror":"https://ror.org/01s91ey96","country_code":"US","type":"education","lineage":["https://openalex.org/I137902535","https://openalex.org/I170897317","https://openalex.org/I69048370"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Michael Shoffner","raw_affiliation_strings":["Renaissance Computing Institute, University of North Carolina at Chapel Hill, Chapel Hill, USA"],"affiliations":[{"raw_affiliation_string":"Renaissance Computing Institute, University of North Carolina at Chapel Hill, Chapel Hill, USA","institution_ids":["https://openalex.org/I69048370","https://openalex.org/I114027177"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5113825072","display_name":"Claris Castillo","orcid":null},"institutions":[{"id":"https://openalex.org/I69048370","display_name":"Renaissance Computing Institute","ror":"https://ror.org/01s91ey96","country_code":"US","type":"education","lineage":["https://openalex.org/I137902535","https://openalex.org/I170897317","https://openalex.org/I69048370"]},{"id":"https://openalex.org/I114027177","display_name":"University of North Carolina at Chapel Hill","ror":"https://ror.org/0130frc33","country_code":"US","type":"education","lineage":["https://openalex.org/I114027177"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Claris Castillo","raw_affiliation_strings":["Renaissance Computing Institute, University of North Carolina at Chapel Hill, Chapel Hill, USA"],"affiliations":[{"raw_affiliation_string":"Renaissance Computing Institute, University of North Carolina at Chapel Hill, Chapel Hill, USA","institution_ids":["https://openalex.org/I69048370","https://openalex.org/I114027177"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5084726442","display_name":"Charles Schmitt","orcid":"https://orcid.org/0000-0002-3148-2263"},"institutions":[{"id":"https://openalex.org/I114027177","display_name":"University of North Carolina at Chapel Hill","ror":"https://ror.org/0130frc33","country_code":"US","type":"education","lineage":["https://openalex.org/I114027177"]},{"id":"https://openalex.org/I69048370","display_name":"Renaissance Computing Institute","ror":"https://ror.org/01s91ey96","country_code":"US","type":"education","lineage":["https://openalex.org/I137902535","https://openalex.org/I170897317","https://openalex.org/I69048370"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Charles Schmitt","raw_affiliation_strings":["Renaissance Computing Institute, University of North Carolina at Chapel Hill, Chapel Hill, USA"],"affiliations":[{"raw_affiliation_string":"Renaissance Computing Institute, University of North Carolina at Chapel Hill, Chapel Hill, USA","institution_ids":["https://openalex.org/I69048370","https://openalex.org/I114027177"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5100688757"],"corresponding_institution_ids":["https://openalex.org/I114027177","https://openalex.org/I69048370"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.15847498,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"35","last_page":"37"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9976000189781189,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},"topics":[{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9976000189781189,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T11181","display_name":"Advanced Data Storage Technologies","score":0.9909999966621399,"subfield":{"id":"https://openalex.org/subfields/1705","display_name":"Computer Networks and Communications"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10101","display_name":"Cloud Computing and Resource Management","score":0.9872000217437744,"subfield":{"id":"https://openalex.org/subfields/1710","display_name":"Information Systems"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/workflow","display_name":"Workflow","score":0.8272275924682617},{"id":"https://openalex.org/keywords/cloud-computing","display_name":"Cloud computing","score":0.7618448734283447},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7589404582977295},{"id":"https://openalex.org/keywords/metadata","display_name":"Metadata","score":0.695151150226593},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.6497435569763184},{"id":"https://openalex.org/keywords/data-management","display_name":"Data management","score":0.5558696389198303},{"id":"https://openalex.org/keywords/workflow-management-system","display_name":"Workflow management system","score":0.5370420813560486},{"id":"https://openalex.org/keywords/informatics","display_name":"Informatics","score":0.4806296229362488},{"id":"https://openalex.org/keywords/key","display_name":"Key (lock)","score":0.45464664697647095},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.3694455027580261},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.34263038635253906},{"id":"https://openalex.org/keywords/knowledge-management","display_name":"Knowledge management","score":0.32049453258514404},{"id":"https://openalex.org/keywords/computer-security","display_name":"Computer security","score":0.11109936237335205},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.10069721937179565}],"concepts":[{"id":"https://openalex.org/C177212765","wikidata":"https://www.wikidata.org/wiki/Q627335","display_name":"Workflow","level":2,"score":0.8272275924682617},{"id":"https://openalex.org/C79974875","wikidata":"https://www.wikidata.org/wiki/Q483639","display_name":"Cloud computing","level":2,"score":0.7618448734283447},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7589404582977295},{"id":"https://openalex.org/C93518851","wikidata":"https://www.wikidata.org/wiki/Q180160","display_name":"Metadata","level":2,"score":0.695151150226593},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.6497435569763184},{"id":"https://openalex.org/C1668388","wikidata":"https://www.wikidata.org/wiki/Q1149776","display_name":"Data management","level":2,"score":0.5558696389198303},{"id":"https://openalex.org/C140824633","wikidata":"https://www.wikidata.org/wiki/Q2808660","display_name":"Workflow management system","level":3,"score":0.5370420813560486},{"id":"https://openalex.org/C191630685","wikidata":"https://www.wikidata.org/wiki/Q4027615","display_name":"Informatics","level":2,"score":0.4806296229362488},{"id":"https://openalex.org/C26517878","wikidata":"https://www.wikidata.org/wiki/Q228039","display_name":"Key (lock)","level":2,"score":0.45464664697647095},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.3694455027580261},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.34263038635253906},{"id":"https://openalex.org/C56739046","wikidata":"https://www.wikidata.org/wiki/Q192060","display_name":"Knowledge management","level":1,"score":0.32049453258514404},{"id":"https://openalex.org/C38652104","wikidata":"https://www.wikidata.org/wiki/Q3510521","display_name":"Computer security","level":1,"score":0.11109936237335205},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.10069721937179565},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C119599485","wikidata":"https://www.wikidata.org/wiki/Q43035","display_name":"Electrical engineering","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/bigdata.2014.7004485","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bigdata.2014.7004485","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2014 IEEE International Conference on Big Data (Big Data)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/9","score":0.6299999952316284,"display_name":"Industry, innovation and infrastructure"}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":2,"referenced_works":["https://openalex.org/W790410098","https://openalex.org/W2150607931"],"related_works":["https://openalex.org/W2375304607","https://openalex.org/W2391168633","https://openalex.org/W2353477037","https://openalex.org/W2385499106","https://openalex.org/W2110462752","https://openalex.org/W1574425962","https://openalex.org/W4310820052","https://openalex.org/W2354357087","https://openalex.org/W2352774566","https://openalex.org/W4243836028"],"abstract_inverted_index":{"Genomic":[0],"research":[1],"involves":[2],"a":[3,113],"considerable":[4],"amount":[5],"of":[6,23,33,80,98],"intensive":[7],"computational":[8],"and":[9,26,29,35,47,52,68,87,109],"data":[10,20,28,67,86],"management":[11,22,89],"challenges":[12],"including":[13],"varying":[14],"demand":[15],"for":[16,66],"computing":[17],"resources,":[18],"large":[19],"staging,":[21],"complex":[24],"workflows,":[25],"managing":[27],"metadata":[30],"across":[31],"thousands":[32],"experiments":[34],"datasets.":[36],"To":[37],"address":[38,75],"these":[39,62,76],"challenges,":[40],"researchers":[41,56],"are":[42],"typically":[43],"forced":[44],"to":[45,74,111],"acquire":[46],"maintain":[48],"experienced":[49],"IT":[50],"staff":[51],"informatics":[53],"infrastructure.":[54],"Increasingly":[55],"have":[57],"explored":[58],"cloud":[59,82],"technologies,":[60],"yet":[61],"lack":[63],"key":[64],"capabilities":[65],"workflow":[69,88],"management.":[70],"We":[71,91],"introduce":[72],"work":[73,94],"issues":[77],"through":[78],"use":[79],"federated":[81],"infrastructure":[83,115],"coupled":[84],"with":[85],"technology.":[90],"present":[92],"preliminary":[93],"toward":[95],"the":[96],"integration":[97],"three":[99],"major":[100],"technologies:":[101],"ExoGENI,":[102],"integrated":[103],"Rule":[104],"Oriented":[105],"Data":[106],"System":[107],"(iRODS),":[108],"Pegasus/HTCondor,":[110],"develop":[112],"software":[114],"that":[116],"better":[117],"supports":[118],"data-and":[119],"workflow-centric":[120],"genomic":[121],"analysis.":[122]},"counts_by_year":[],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
