{"id":"https://openalex.org/W2045124397","doi":"https://doi.org/10.1109/bibmw.2012.6470206","title":"Combining labeled and unlabeled data for biom&amp;#x00E9;dical event extraction","display_name":"Combining labeled and unlabeled data for biom&amp;#x00E9;dical event extraction","publication_year":2012,"publication_date":"2012-10-01","ids":{"openalex":"https://openalex.org/W2045124397","doi":"https://doi.org/10.1109/bibmw.2012.6470206","mag":"2045124397"},"language":"en","primary_location":{"id":"doi:10.1109/bibmw.2012.6470206","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibmw.2012.6470206","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2012 IEEE International Conference on Bioinformatics and Biomedicine Workshops","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100696824","display_name":"Jian Wang","orcid":"https://orcid.org/0000-0002-4316-932X"},"institutions":[{"id":"https://openalex.org/I27357992","display_name":"Dalian University of Technology","ror":"https://ror.org/023hj5876","country_code":"CN","type":"education","lineage":["https://openalex.org/I27357992"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jian Wang","raw_affiliation_strings":["School of Computer Science and Technology, Dalian University of Technology, Dalian, China","School of Computer Science & Technology, Dalian University of Technology, Dalian, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology, Dalian University of Technology, Dalian, China","institution_ids":["https://openalex.org/I27357992"]},{"raw_affiliation_string":"School of Computer Science & Technology, Dalian University of Technology, Dalian, China","institution_ids":["https://openalex.org/I27357992"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5111899405","display_name":"Qian Xu","orcid":"https://orcid.org/0009-0008-1884-489X"},"institutions":[{"id":"https://openalex.org/I27357992","display_name":"Dalian University of Technology","ror":"https://ror.org/023hj5876","country_code":"CN","type":"education","lineage":["https://openalex.org/I27357992"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Qian Xu","raw_affiliation_strings":["School of Computer Science and Technology, Dalian University of Technology, Dalian, China","School of Computer Science & Technology, Dalian University of Technology, Dalian, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology, Dalian University of Technology, Dalian, China","institution_ids":["https://openalex.org/I27357992"]},{"raw_affiliation_string":"School of Computer Science & Technology, Dalian University of Technology, Dalian, China","institution_ids":["https://openalex.org/I27357992"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5023931221","display_name":"Hongfei Lin","orcid":"https://orcid.org/0000-0003-0872-7688"},"institutions":[{"id":"https://openalex.org/I27357992","display_name":"Dalian University of Technology","ror":"https://ror.org/023hj5876","country_code":"CN","type":"education","lineage":["https://openalex.org/I27357992"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Hongfei Lin","raw_affiliation_strings":["School of Computer Science and Technology, Dalian University of Technology, Dalian, China","School of Computer Science & Technology, Dalian University of Technology, Dalian, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology, Dalian University of Technology, Dalian, China","institution_ids":["https://openalex.org/I27357992"]},{"raw_affiliation_string":"School of Computer Science & Technology, Dalian University of Technology, Dalian, China","institution_ids":["https://openalex.org/I27357992"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051597671","display_name":"Zhihao Yang","orcid":"https://orcid.org/0000-0001-6186-2024"},"institutions":[{"id":"https://openalex.org/I27357992","display_name":"Dalian University of Technology","ror":"https://ror.org/023hj5876","country_code":"CN","type":"education","lineage":["https://openalex.org/I27357992"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhihao Yang","raw_affiliation_strings":["School of Computer Science and Technology, Dalian University of Technology, Dalian, China","School of Computer Science & Technology, Dalian University of Technology, Dalian, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology, Dalian University of Technology, Dalian, China","institution_ids":["https://openalex.org/I27357992"]},{"raw_affiliation_string":"School of Computer Science & Technology, Dalian University of Technology, Dalian, China","institution_ids":["https://openalex.org/I27357992"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100718350","display_name":"Yanpeng Li","orcid":"https://orcid.org/0000-0003-3365-6092"},"institutions":[{"id":"https://openalex.org/I27357992","display_name":"Dalian University of Technology","ror":"https://ror.org/023hj5876","country_code":"CN","type":"education","lineage":["https://openalex.org/I27357992"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yanpeng Li","raw_affiliation_strings":["School of Computer Science and Technology, Dalian University of Technology, Dalian, China","School of Computer Science & Technology, Dalian University of Technology, Dalian, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology, Dalian University of Technology, Dalian, China","institution_ids":["https://openalex.org/I27357992"]},{"raw_affiliation_string":"School of Computer Science & Technology, Dalian University of Technology, Dalian, China","institution_ids":["https://openalex.org/I27357992"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I27357992"],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":"8","issue":null,"first_page":"594","last_page":"601"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.9617999792098999,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9304999709129333,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/event","display_name":"Event (particle physics)","score":0.7346336841583252},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6694929599761963},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.6034277677536011},{"id":"https://openalex.org/keywords/labeled-data","display_name":"Labeled data","score":0.5962607264518738},{"id":"https://openalex.org/keywords/information-extraction","display_name":"Information extraction","score":0.5134328603744507},{"id":"https://openalex.org/keywords/domain","display_name":"Domain (mathematical analysis)","score":0.49103832244873047},{"id":"https://openalex.org/keywords/extraction","display_name":"Extraction (chemistry)","score":0.49094727635383606},{"id":"https://openalex.org/keywords/task","display_name":"Task (project management)","score":0.4655070900917053},{"id":"https://openalex.org/keywords/data-extraction","display_name":"Data extraction","score":0.41572582721710205},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.3847184479236603},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3829666078090668},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.334092378616333},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.18340858817100525},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.09652262926101685},{"id":"https://openalex.org/keywords/chromatography","display_name":"Chromatography","score":0.0926513671875},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.05189600586891174}],"concepts":[{"id":"https://openalex.org/C2779662365","wikidata":"https://www.wikidata.org/wiki/Q5416694","display_name":"Event (particle physics)","level":2,"score":0.7346336841583252},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6694929599761963},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.6034277677536011},{"id":"https://openalex.org/C2776145971","wikidata":"https://www.wikidata.org/wiki/Q30673951","display_name":"Labeled data","level":2,"score":0.5962607264518738},{"id":"https://openalex.org/C195807954","wikidata":"https://www.wikidata.org/wiki/Q1662562","display_name":"Information extraction","level":2,"score":0.5134328603744507},{"id":"https://openalex.org/C36503486","wikidata":"https://www.wikidata.org/wiki/Q11235244","display_name":"Domain (mathematical analysis)","level":2,"score":0.49103832244873047},{"id":"https://openalex.org/C4725764","wikidata":"https://www.wikidata.org/wiki/Q844704","display_name":"Extraction (chemistry)","level":2,"score":0.49094727635383606},{"id":"https://openalex.org/C2780451532","wikidata":"https://www.wikidata.org/wiki/Q759676","display_name":"Task (project management)","level":2,"score":0.4655070900917053},{"id":"https://openalex.org/C2777466982","wikidata":"https://www.wikidata.org/wiki/Q5227287","display_name":"Data extraction","level":3,"score":0.41572582721710205},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.3847184479236603},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3829666078090668},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.334092378616333},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.18340858817100525},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.09652262926101685},{"id":"https://openalex.org/C43617362","wikidata":"https://www.wikidata.org/wiki/Q170050","display_name":"Chromatography","level":1,"score":0.0926513671875},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.05189600586891174},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.0},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0},{"id":"https://openalex.org/C2779473830","wikidata":"https://www.wikidata.org/wiki/Q1540899","display_name":"MEDLINE","level":2,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0},{"id":"https://openalex.org/C201995342","wikidata":"https://www.wikidata.org/wiki/Q682496","display_name":"Systems engineering","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/bibmw.2012.6470206","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibmw.2012.6470206","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2012 IEEE International Conference on Bioinformatics and Biomedicine Workshops","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":22,"referenced_works":["https://openalex.org/W136394213","https://openalex.org/W165790511","https://openalex.org/W1604685658","https://openalex.org/W1868952759","https://openalex.org/W1989375079","https://openalex.org/W2032566933","https://openalex.org/W2038037963","https://openalex.org/W2056478778","https://openalex.org/W2075655036","https://openalex.org/W2100083985","https://openalex.org/W2103316358","https://openalex.org/W2108706252","https://openalex.org/W2127147316","https://openalex.org/W2149803936","https://openalex.org/W2156362066","https://openalex.org/W2171283231","https://openalex.org/W2173988953","https://openalex.org/W2252226131","https://openalex.org/W6605508192","https://openalex.org/W6636363920","https://openalex.org/W6685308377","https://openalex.org/W6691242702"],"related_works":["https://openalex.org/W2377297411","https://openalex.org/W3148217948","https://openalex.org/W2375788636","https://openalex.org/W2358561207","https://openalex.org/W2388704129","https://openalex.org/W2392827053","https://openalex.org/W2975617233","https://openalex.org/W2377877252","https://openalex.org/W2362914816","https://openalex.org/W4206497353"],"abstract_inverted_index":{"In":[0,35],"biom\u00e9dical":[1,45,107],"event":[2,46,108],"extraction":[3,27,47,109],"domain,":[4],"there":[5],"is":[6,70,92],"a":[7,15,40,52,66],"small":[8],"amount":[9],"of":[10,18,88,99],"labeled":[11,62,100],"data":[12,33,60,63,77,103],"along":[13],"with":[14],"large":[16],"pool":[17],"unlabeled":[19,59,102],"data.":[20],"Many":[21],"supervised":[22],"learning":[23],"algorithms":[24],"for":[25,106],"bio-event":[26],"have":[28],"been":[29],"affected":[30],"by":[31],"the":[32,76,79,86,93,97,115],"sparseness.":[34],"this":[36,119],"paper,":[37],"we":[38],"present":[39],"new":[41],"solution":[42],"to":[43,55],"perform":[44],"from":[48,58,78],"scientific":[49],"documents,":[50],"applying":[51],"semi-supervised":[53],"approach":[54],"extract":[56],"features":[57,64],"using":[61],"as":[65],"reference.":[67],"This":[68],"strategy":[69],"evaluated":[71],"via":[72],"experiments":[73],"in":[74,118],"which":[75],"BioNLP2011":[80],"and":[81,101,110],"PubMed":[82],"are":[83,104],"applied.":[84],"To":[85],"best":[87],"our":[89,111],"knowledge,":[90],"it":[91],"first":[94],"time":[95],"that":[96],"combination":[98],"used":[105],"experimental":[112],"results":[113],"demonstrate":[114],"state-of-the-art":[116],"performance":[117],"task.":[120]},"counts_by_year":[{"year":2013,"cited_by_count":1}],"updated_date":"2026-07-14T23:27:15.235271","created_date":"2016-06-24T00:00:00"}
