{"id":"https://openalex.org/W2034836525","doi":"https://doi.org/10.1109/bibmw.2011.6112494","title":"BioDB: Integration of biological knowledgebases","display_name":"BioDB: Integration of biological knowledgebases","publication_year":2011,"publication_date":"2011-11-01","ids":{"openalex":"https://openalex.org/W2034836525","doi":"https://doi.org/10.1109/bibmw.2011.6112494","mag":"2034836525"},"language":"en","primary_location":{"id":"doi:10.1109/bibmw.2011.6112494","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibmw.2011.6112494","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops (BIBMW)","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5063055874","display_name":"James Gerhart","orcid":"https://orcid.org/0000-0002-6661-6401"},"institutions":[{"id":"https://openalex.org/I72816309","display_name":"Drexel University","ror":"https://ror.org/04bdffz58","country_code":"US","type":"education","lineage":["https://openalex.org/I72816309"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"J. Gerhart","raw_affiliation_strings":["School of Biomedical Engineering and Health Systems, Drexel University, Philadelphia, USA","Drexel University, School of Biomedical Engineering and Health Systems, Philadelphia, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Biomedical Engineering and Health Systems, Drexel University, Philadelphia, USA","institution_ids":["https://openalex.org/I72816309"]},{"raw_affiliation_string":"Drexel University, School of Biomedical Engineering and Health Systems, Philadelphia, USA","institution_ids":["https://openalex.org/I72816309"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5016398897","display_name":"Ahmet Sa\u00e7an","orcid":"https://orcid.org/0000-0002-3570-3270"},"institutions":[{"id":"https://openalex.org/I72816309","display_name":"Drexel University","ror":"https://ror.org/04bdffz58","country_code":"US","type":"education","lineage":["https://openalex.org/I72816309"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"A. Sacan","raw_affiliation_strings":["School of Biomedical Engineering and Health Systems, Drexel University, Philadelphia, USA","Drexel University, School of Biomedical Engineering and Health Systems, Philadelphia, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Biomedical Engineering and Health Systems, Drexel University, Philadelphia, USA","institution_ids":["https://openalex.org/I72816309"]},{"raw_affiliation_string":"Drexel University, School of Biomedical Engineering and Health Systems, Philadelphia, USA","institution_ids":["https://openalex.org/I72816309"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I72816309"],"apc_list":null,"apc_paid":null,"fwci":0.9941,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.77647692,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":null,"issue":null,"first_page":"899","last_page":"899"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9890000224113464,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9890000224113464,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9835000038146973,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.9732000231742859,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7714808583259583},{"id":"https://openalex.org/keywords/data-integration","display_name":"Data integration","score":0.5728219747543335},{"id":"https://openalex.org/keywords/biological-data","display_name":"Biological data","score":0.5722265243530273},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.37701886892318726},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.35336393117904663},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.07141223549842834}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7714808583259583},{"id":"https://openalex.org/C72634772","wikidata":"https://www.wikidata.org/wiki/Q386824","display_name":"Data integration","level":2,"score":0.5728219747543335},{"id":"https://openalex.org/C201797286","wikidata":"https://www.wikidata.org/wiki/Q4914986","display_name":"Biological data","level":2,"score":0.5722265243530273},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.37701886892318726},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.35336393117904663},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.07141223549842834},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/bibmw.2011.6112494","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibmw.2011.6112494","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops (BIBMW)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W2307569040","https://openalex.org/W2131941936","https://openalex.org/W2366067673","https://openalex.org/W2126703991","https://openalex.org/W2060096282","https://openalex.org/W2541393756","https://openalex.org/W2610897791","https://openalex.org/W2385643360","https://openalex.org/W4375944314","https://openalex.org/W19972923"],"abstract_inverted_index":{"In":[0],"this":[1,24],"Era":[2],"of":[3,33],"Information,":[4],"a":[5,44,62,79],"method":[6],"must":[7],"be":[8],"found":[9],"to":[10],"handle":[11],"how":[12],"the":[13,51,74],"drastically":[14],"increasing":[15],"amount":[16],"biological":[17,53],"data":[18,25,35,54,76],"is":[19,26,66],"stored":[20],"and":[21,56,82],"accessed.":[22],"Currently,":[23],"spread":[27],"across":[28],"numerous":[29],"sources,":[30],"making":[31],"analysis":[32],"said":[34],"more":[36],"difficult.":[37],"The":[38],"BioDB":[39,72],"tool":[40],"will":[41],"serve":[42],"as":[43],"solution.":[45],"By":[46],"creating":[47],"programmable":[48],"objects":[49],"from":[50],"current":[52],"tables":[55],"using":[57],"them":[58],"in":[59],"conjunction":[60],"with":[61],"local":[63],"database":[64],"that":[65],"populated":[67],"on":[68],"an":[69],"as-needed":[70],"basis,":[71],"combines":[73],"various":[75],"sources":[77],"into":[78],"single":[80],"fast":[81],"effective":[83],"platform.":[84]},"counts_by_year":[{"year":2013,"cited_by_count":1}],"updated_date":"2026-07-29T14:22:42.915294","created_date":"2025-10-10T00:00:00"}
