{"id":"https://openalex.org/W2088856450","doi":"https://doi.org/10.1109/bibmw.2011.6112376","title":"A web interface for the quantification of microtubule dynamics","display_name":"A web interface for the quantification of microtubule dynamics","publication_year":2011,"publication_date":"2011-11-01","ids":{"openalex":"https://openalex.org/W2088856450","doi":"https://doi.org/10.1109/bibmw.2011.6112376","mag":"2088856450","pmid":"https://pubmed.ncbi.nlm.nih.gov/27583309"},"language":"en","primary_location":{"id":"doi:10.1109/bibmw.2011.6112376","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibmw.2011.6112376","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops (BIBMW)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/5003031","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5109079255","display_name":"Koon Yin Kong","orcid":null},"institutions":[{"id":"https://openalex.org/I130701444","display_name":"Georgia Institute of Technology","ror":"https://ror.org/01zkghx44","country_code":"US","type":"education","lineage":["https://openalex.org/I130701444"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Koon Yin Kong","raw_affiliation_strings":["School of Electrical and Computer Engineering, Georgia Institute of Technology, USA"],"affiliations":[{"raw_affiliation_string":"School of Electrical and Computer Engineering, Georgia Institute of Technology, USA","institution_ids":["https://openalex.org/I130701444"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5064924657","display_name":"Adam I. Marcus","orcid":"https://orcid.org/0000-0003-0484-3569"},"institutions":[{"id":"https://openalex.org/I130701444","display_name":"Georgia Institute of Technology","ror":"https://ror.org/01zkghx44","country_code":"US","type":"education","lineage":["https://openalex.org/I130701444"]},{"id":"https://openalex.org/I2802612298","display_name":"The Wallace H. Coulter Department of Biomedical Engineering","ror":"https://ror.org/02j15s898","country_code":"US","type":"education","lineage":["https://openalex.org/I130701444","https://openalex.org/I150468666","https://openalex.org/I2802612298"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"A. I. Marcus","raw_affiliation_strings":["Wallace H. Coulter Department of Biomedical Engineering, Georgia Institute of Technology and Emory University, USA"],"affiliations":[{"raw_affiliation_string":"Wallace H. Coulter Department of Biomedical Engineering, Georgia Institute of Technology and Emory University, USA","institution_ids":["https://openalex.org/I2802612298","https://openalex.org/I130701444"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5098459642","display_name":"Paraskevi Giaanakakou","orcid":null},"institutions":[{"id":"https://openalex.org/I150468666","display_name":"Emory University","ror":"https://ror.org/03czfpz43","country_code":"US","type":"education","lineage":["https://openalex.org/I150468666"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"P. Giaanakakou","raw_affiliation_strings":["Winship Cancer Institute, Emory University, USA"],"affiliations":[{"raw_affiliation_string":"Winship Cancer Institute, Emory University, USA","institution_ids":["https://openalex.org/I150468666"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5030096887","display_name":"May D. Wang","orcid":"https://orcid.org/0000-0003-3961-3608"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"M. D. Wang","raw_affiliation_strings":["School of Electrical and Computer Engineering, Georgia Institute of Technology, USA; Wallace H. Coulter Department of Biomedical Engineering, Georgia Institute of Technology and Emory University, USA"],"affiliations":[{"raw_affiliation_string":"School of Electrical and Computer Engineering, Georgia Institute of Technology, USA; Wallace H. Coulter Department of Biomedical Engineering, Georgia Institute of Technology and Emory University, USA","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5109079255"],"corresponding_institution_ids":["https://openalex.org/I130701444"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.13209831,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"115","issue":null,"first_page":"209","last_page":"214"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10492","display_name":"Microtubule and mitosis dynamics","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1307","display_name":"Cell Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10492","display_name":"Microtubule and mitosis dynamics","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1307","display_name":"Cell Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11879","display_name":"Protist diversity and phylogeny","score":0.9846000075340271,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.982699990272522,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8230560421943665},{"id":"https://openalex.org/keywords/workflow","display_name":"Workflow","score":0.7894723415374756},{"id":"https://openalex.org/keywords/interface","display_name":"Interface (matter)","score":0.7299029231071472},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.5400515198707581},{"id":"https://openalex.org/keywords/process","display_name":"Process (computing)","score":0.5043548345565796},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.47857096791267395},{"id":"https://openalex.org/keywords/user-interface","display_name":"User interface","score":0.4749474823474884},{"id":"https://openalex.org/keywords/software-engineering","display_name":"Software engineering","score":0.37988442182540894},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.3682748079299927},{"id":"https://openalex.org/keywords/human\u2013computer-interaction","display_name":"Human\u2013computer interaction","score":0.35781797766685486},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.1498487889766693},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.1357029378414154}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8230560421943665},{"id":"https://openalex.org/C177212765","wikidata":"https://www.wikidata.org/wiki/Q627335","display_name":"Workflow","level":2,"score":0.7894723415374756},{"id":"https://openalex.org/C113843644","wikidata":"https://www.wikidata.org/wiki/Q901882","display_name":"Interface (matter)","level":4,"score":0.7299029231071472},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.5400515198707581},{"id":"https://openalex.org/C98045186","wikidata":"https://www.wikidata.org/wiki/Q205663","display_name":"Process (computing)","level":2,"score":0.5043548345565796},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.47857096791267395},{"id":"https://openalex.org/C89505385","wikidata":"https://www.wikidata.org/wiki/Q47146","display_name":"User interface","level":2,"score":0.4749474823474884},{"id":"https://openalex.org/C115903868","wikidata":"https://www.wikidata.org/wiki/Q80993","display_name":"Software engineering","level":1,"score":0.37988442182540894},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.3682748079299927},{"id":"https://openalex.org/C107457646","wikidata":"https://www.wikidata.org/wiki/Q207434","display_name":"Human\u2013computer interaction","level":1,"score":0.35781797766685486},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.1498487889766693},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.1357029378414154},{"id":"https://openalex.org/C129307140","wikidata":"https://www.wikidata.org/wiki/Q6795880","display_name":"Maximum bubble pressure method","level":3,"score":0.0},{"id":"https://openalex.org/C157915830","wikidata":"https://www.wikidata.org/wiki/Q2928001","display_name":"Bubble","level":2,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1109/bibmw.2011.6112376","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibmw.2011.6112376","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops (BIBMW)","raw_type":"proceedings-article"},{"id":"pmid:27583309","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/27583309","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE International Conference on Bioinformatics and Biomedicine workshops. IEEE International Conference on Bioinformatics and Biomedicine","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:5003031","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/5003031","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"IEEE Int Conf Bioinform Biomed Workshops","raw_type":"Text"}],"best_oa_location":{"id":"pmh:oai:pubmedcentral.nih.gov:5003031","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/5003031","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"IEEE Int Conf Bioinform Biomed Workshops","raw_type":"Text"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":6,"referenced_works":["https://openalex.org/W1965467117","https://openalex.org/W2147787547","https://openalex.org/W2150575510","https://openalex.org/W2165748110","https://openalex.org/W2171725976","https://openalex.org/W4212909492"],"related_works":["https://openalex.org/W1981780420","https://openalex.org/W2182707996","https://openalex.org/W45233828","https://openalex.org/W2964988449","https://openalex.org/W2397952901","https://openalex.org/W2029380707","https://openalex.org/W188202134","https://openalex.org/W4255934811","https://openalex.org/W1649706580","https://openalex.org/W3195608031"],"abstract_inverted_index":{"We":[0,98],"propose":[1],"a":[2,63,134],"web":[3,60],"interface":[4,61,90,131],"that":[5],"allows":[6,74,117],"researchers":[7],"to":[8,68,94,110,126],"quantify":[9],"and":[10,42,51,80,124,141],"analyze":[11],"microtubule":[12,19,145],"confocal":[13,20],"images":[14,21],"online.":[15,71],"Most":[16],"analyses":[17],"of":[18,49,77,88,102,119],"are":[22,33],"performed":[23],"manually":[24],"using":[25],"very":[26],"simple":[27,64],"software":[28],"or":[29],"tools.":[30],"Analysis":[31,86],"results":[32,52,81],"stored":[34],"locally":[35],"within":[36],"each":[37],"collaborator":[38],"with":[39],"different":[40,56,83,149],"styles":[41],"formats.":[43],"This":[44,130],"has":[45],"limited":[46],"the":[47,89,100,107,112],"sharing":[48,76],"data":[50,70,79],"when":[53],"collaborating":[54],"among":[55,82],"research":[57],"parties.":[58],"A":[59],"provides":[62],"way":[65],"for":[66,137],"users":[67],"process":[69],"It":[72],"also":[73,116],"easy":[75],"both":[78],"participating":[84],"groups.":[85],"workflow":[87,109],"is":[91],"made":[92],"similar":[93],"existing":[95,128],"manual":[96],"protocols.":[97],"demonstrate":[99],"integration":[101,118],"image":[103,146],"processing":[104],"algorithm":[105,140],"in":[106],"current":[108],"aid":[111],"analysis.":[113],"Our":[114],"design":[115],"novel":[120],"automated":[121,139],"analysis":[122,147],"algorithms":[123],"modules":[125],"re-evaluate":[127],"data.":[129],"can":[132],"provide":[133],"validation":[135],"platform":[136],"new":[138],"allow":[142],"collaboration":[143],"on":[144],"from":[148],"locations.":[150]},"counts_by_year":[],"updated_date":"2026-04-21T08:09:41.155169","created_date":"2025-10-10T00:00:00"}
