{"id":"https://openalex.org/W2032828681","doi":"https://doi.org/10.1109/bibmw.2011.6112357","title":"Variation in physicochemical properties of the hypervariable region 1 during acute and chronic stages of hepatitis C virus infection","display_name":"Variation in physicochemical properties of the hypervariable region 1 during acute and chronic stages of hepatitis C virus infection","publication_year":2011,"publication_date":"2011-11-01","ids":{"openalex":"https://openalex.org/W2032828681","doi":"https://doi.org/10.1109/bibmw.2011.6112357","mag":"2032828681"},"language":"en","primary_location":{"id":"doi:10.1109/bibmw.2011.6112357","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibmw.2011.6112357","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops (BIBMW)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5050206611","display_name":"Irina V. Astrakhantseva","orcid":"https://orcid.org/0000-0002-2210-9926"},"institutions":[{"id":"https://openalex.org/I1289490764","display_name":"Centers for Disease Control and Prevention","ror":"https://ror.org/042twtr12","country_code":"US","type":"funder","lineage":["https://openalex.org/I1289490764","https://openalex.org/I1299022934"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"I. V. Astrakhantseva","raw_affiliation_strings":["Laboratory Branch, Division of Viral Hepatitis, Center for Disease Control and Prevention, Atlanta, USA"],"affiliations":[{"raw_affiliation_string":"Laboratory Branch, Division of Viral Hepatitis, Center for Disease Control and Prevention, Atlanta, USA","institution_ids":["https://openalex.org/I1289490764"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5018798814","display_name":"David S. Campo","orcid":"https://orcid.org/0000-0002-8970-3436"},"institutions":[{"id":"https://openalex.org/I1289490764","display_name":"Centers for Disease Control and Prevention","ror":"https://ror.org/042twtr12","country_code":"US","type":"funder","lineage":["https://openalex.org/I1289490764","https://openalex.org/I1299022934"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"D. S. Campo","raw_affiliation_strings":["Laboratory Branch, Division of Viral Hepatitis, Center for Disease Control and Prevention, Atlanta, USA"],"affiliations":[{"raw_affiliation_string":"Laboratory Branch, Division of Viral Hepatitis, Center for Disease Control and Prevention, Atlanta, USA","institution_ids":["https://openalex.org/I1289490764"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110245876","display_name":"A. Araujo","orcid":null},"institutions":[{"id":"https://openalex.org/I1289490764","display_name":"Centers for Disease Control and Prevention","ror":"https://ror.org/042twtr12","country_code":"US","type":"funder","lineage":["https://openalex.org/I1289490764","https://openalex.org/I1299022934"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"A. Araujo","raw_affiliation_strings":["Laboratory Branch, Division of Viral Hepatitis, Center for Disease Control and Prevention, Atlanta, USA"],"affiliations":[{"raw_affiliation_string":"Laboratory Branch, Division of Viral Hepatitis, Center for Disease Control and Prevention, Atlanta, USA","institution_ids":["https://openalex.org/I1289490764"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5108440193","display_name":"CG Teo","orcid":null},"institutions":[{"id":"https://openalex.org/I1289490764","display_name":"Centers for Disease Control and Prevention","ror":"https://ror.org/042twtr12","country_code":"US","type":"funder","lineage":["https://openalex.org/I1289490764","https://openalex.org/I1299022934"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"C.-G Teo","raw_affiliation_strings":["Laboratory Branch, Division of Viral Hepatitis, Center for Disease Control and Prevention, Atlanta, USA"],"affiliations":[{"raw_affiliation_string":"Laboratory Branch, Division of Viral Hepatitis, Center for Disease Control and Prevention, Atlanta, USA","institution_ids":["https://openalex.org/I1289490764"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5085435304","display_name":"Yury Khudyakov","orcid":null},"institutions":[{"id":"https://openalex.org/I1289490764","display_name":"Centers for Disease Control and Prevention","ror":"https://ror.org/042twtr12","country_code":"US","type":"funder","lineage":["https://openalex.org/I1289490764","https://openalex.org/I1299022934"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Y. Khudyakov","raw_affiliation_strings":["Laboratory Branch, Division of Viral Hepatitis, Center for Disease Control and Prevention, Atlanta, USA"],"affiliations":[{"raw_affiliation_string":"Laboratory Branch, Division of Viral Hepatitis, Center for Disease Control and Prevention, Atlanta, USA","institution_ids":["https://openalex.org/I1289490764"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5039417199","display_name":"Saleem Kamili","orcid":"https://orcid.org/0000-0002-7984-9044"},"institutions":[{"id":"https://openalex.org/I1289490764","display_name":"Centers for Disease Control and Prevention","ror":"https://ror.org/042twtr12","country_code":"US","type":"funder","lineage":["https://openalex.org/I1289490764","https://openalex.org/I1299022934"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"S. Kamili","raw_affiliation_strings":["Laboratory Branch, Division of Viral Hepatitis, Center for Disease Control and Prevention, Atlanta, USA"],"affiliations":[{"raw_affiliation_string":"Laboratory Branch, Division of Viral Hepatitis, Center for Disease Control and Prevention, Atlanta, USA","institution_ids":["https://openalex.org/I1289490764"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5050206611"],"corresponding_institution_ids":["https://openalex.org/I1289490764"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":3,"citation_normalized_percentile":{"value":0.09550211,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":"78","issue":null,"first_page":"72","last_page":"78"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10151","display_name":"Hepatitis C virus research","score":1.0,"subfield":{"id":"https://openalex.org/subfields/2721","display_name":"Hepatology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10151","display_name":"Hepatitis C virus research","score":1.0,"subfield":{"id":"https://openalex.org/subfields/2721","display_name":"Hepatology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10351","display_name":"Liver Disease Diagnosis and Treatment","score":0.9973000288009644,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10340","display_name":"Hepatitis B Virus Studies","score":0.9961000084877014,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/hypervariable-region","display_name":"Hypervariable region","score":0.903974175453186},{"id":"https://openalex.org/keywords/chronic-hepatitis","display_name":"Chronic hepatitis","score":0.7044703960418701},{"id":"https://openalex.org/keywords/chronic-infection","display_name":"Chronic infection","score":0.5576300621032715},{"id":"https://openalex.org/keywords/virus","display_name":"Virus","score":0.54563969373703},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.5453710556030273},{"id":"https://openalex.org/keywords/hepatitis-c-virus","display_name":"Hepatitis C virus","score":0.4727402925491333},{"id":"https://openalex.org/keywords/internal-medicine","display_name":"Internal medicine","score":0.3877571225166321},{"id":"https://openalex.org/keywords/gastroenterology","display_name":"Gastroenterology","score":0.3854914605617523},{"id":"https://openalex.org/keywords/immunology","display_name":"Immunology","score":0.35114961862564087},{"id":"https://openalex.org/keywords/immune-system","display_name":"Immune system","score":0.25860583782196045},{"id":"https://openalex.org/keywords/antibody","display_name":"Antibody","score":0.15563875436782837}],"concepts":[{"id":"https://openalex.org/C81566733","wikidata":"https://www.wikidata.org/wiki/Q1047544","display_name":"Hypervariable region","level":3,"score":0.903974175453186},{"id":"https://openalex.org/C3020491458","wikidata":"https://www.wikidata.org/wiki/Q131742","display_name":"Chronic hepatitis","level":3,"score":0.7044703960418701},{"id":"https://openalex.org/C3019392825","wikidata":"https://www.wikidata.org/wiki/Q383126","display_name":"Chronic infection","level":3,"score":0.5576300621032715},{"id":"https://openalex.org/C2522874641","wikidata":"https://www.wikidata.org/wiki/Q808","display_name":"Virus","level":2,"score":0.54563969373703},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.5453710556030273},{"id":"https://openalex.org/C2776408679","wikidata":"https://www.wikidata.org/wiki/Q708693","display_name":"Hepatitis C virus","level":3,"score":0.4727402925491333},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.3877571225166321},{"id":"https://openalex.org/C90924648","wikidata":"https://www.wikidata.org/wiki/Q120569","display_name":"Gastroenterology","level":1,"score":0.3854914605617523},{"id":"https://openalex.org/C203014093","wikidata":"https://www.wikidata.org/wiki/Q101929","display_name":"Immunology","level":1,"score":0.35114961862564087},{"id":"https://openalex.org/C8891405","wikidata":"https://www.wikidata.org/wiki/Q1059","display_name":"Immune system","level":2,"score":0.25860583782196045},{"id":"https://openalex.org/C159654299","wikidata":"https://www.wikidata.org/wiki/Q79460","display_name":"Antibody","level":2,"score":0.15563875436782837}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/bibmw.2011.6112357","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibmw.2011.6112357","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops (BIBMW)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.8199999928474426,"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3"}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":55,"referenced_works":["https://openalex.org/W156217820","https://openalex.org/W1014311435","https://openalex.org/W1558429597","https://openalex.org/W1562491496","https://openalex.org/W1563982849","https://openalex.org/W1902746983","https://openalex.org/W1965648809","https://openalex.org/W1965776393","https://openalex.org/W1977028768","https://openalex.org/W1984390786","https://openalex.org/W1985680307","https://openalex.org/W1990552018","https://openalex.org/W2000782434","https://openalex.org/W2005659329","https://openalex.org/W2006129270","https://openalex.org/W2006309458","https://openalex.org/W2022077416","https://openalex.org/W2026767855","https://openalex.org/W2049836074","https://openalex.org/W2054580376","https://openalex.org/W2059010078","https://openalex.org/W2070767905","https://openalex.org/W2080176796","https://openalex.org/W2088456708","https://openalex.org/W2096286576","https://openalex.org/W2099576848","https://openalex.org/W2101498838","https://openalex.org/W2103796460","https://openalex.org/W2105008918","https://openalex.org/W2109124959","https://openalex.org/W2109643392","https://openalex.org/W2111359040","https://openalex.org/W2112251725","https://openalex.org/W2118422968","https://openalex.org/W2120479348","https://openalex.org/W2120925998","https://openalex.org/W2129141072","https://openalex.org/W2130259551","https://openalex.org/W2136847298","https://openalex.org/W2137314850","https://openalex.org/W2137984149","https://openalex.org/W2138178197","https://openalex.org/W2142850974","https://openalex.org/W2145623055","https://openalex.org/W2146927441","https://openalex.org/W2147710356","https://openalex.org/W2152343979","https://openalex.org/W2155761127","https://openalex.org/W2163284793","https://openalex.org/W2167739504","https://openalex.org/W2169203796","https://openalex.org/W2171517986","https://openalex.org/W2314619766","https://openalex.org/W3151945894","https://openalex.org/W4230827384"],"related_works":["https://openalex.org/W2091829542","https://openalex.org/W2409232331","https://openalex.org/W2016216355","https://openalex.org/W2024652443","https://openalex.org/W2023350867","https://openalex.org/W2022485770","https://openalex.org/W1753162123","https://openalex.org/W2032828681","https://openalex.org/W4251314961","https://openalex.org/W1920022215"],"abstract_inverted_index":{"Differentiation":[0],"between":[1,66,101],"acute":[2,36,57,69,102,119],"and":[3,38,70,81,103],"chronic":[4,39,55,71,104,121],"HCV":[5,41,124],"infections":[6,42],"is":[7,126],"clinically":[8],"important":[9],"given":[10],"that":[11,44,116],"early":[12],"treatment":[13],"of":[14,21,26,60,83,108,123,135,141],"infected":[15],"patients":[16,34,53],"leads":[17],"to":[18,120],"high":[19],"rates":[20],"sustained":[22],"virological":[23],"response.":[24],"Analysis":[25,59],"HVR1":[27,46,88,99,144],"sequences":[28,67],"(n=2179)":[29],"from":[30,33,68,118],"samples":[31],"obtained":[32],"with":[35,54,106],"(n=49)":[37],"(n=102)":[40],"showed":[43,63],"intra-host":[45,143],"diversity":[47],"was":[48],"1.8":[49],"times":[50],"higher":[51],"in":[52,78,98,110,131],"than":[56],"infection.":[58],"molecular":[61],"variance":[62],"significant":[64,76],"differences":[65,77],"patients.":[72],"We":[73],"found":[74],"statistically":[75],"polarity,":[79],"volume":[80],"hydrophobicity":[82],"amino":[84,132],"acids":[85],"at":[86],"10":[87,96],"positions.":[89],"A":[90],"classification":[91],"model":[92],"constructed":[93],"using":[94],"the":[95,142],"positions":[97],"distinguished":[100],"cases":[105],"accuracy":[107],"88%":[109],"cross-validation":[111],"experiments.":[112],"The":[113],"results":[114],"indicate":[115],"progression":[117],"stage":[122],"infection":[125],"accompanied":[127],"by":[128],"characteristic":[129],"changes":[130],"acid":[133],"composition":[134],"HVR1,":[136],"suggesting":[137],"a":[138],"substantial":[139],"regularity":[140],"evolution.":[145]},"counts_by_year":[{"year":2023,"cited_by_count":1},{"year":2020,"cited_by_count":1},{"year":2017,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
