{"id":"https://openalex.org/W7126121635","doi":"https://doi.org/10.1109/bibm66473.2025.11357102","title":"Molecular Subtyping of Ovarian Cancer Using Genes Up-Regulated in B Lymphocytes Stimulated by Anti-IgM","display_name":"Molecular Subtyping of Ovarian Cancer Using Genes Up-Regulated in B Lymphocytes Stimulated by Anti-IgM","publication_year":2025,"publication_date":"2025-12-15","ids":{"openalex":"https://openalex.org/W7126121635","doi":"https://doi.org/10.1109/bibm66473.2025.11357102"},"language":null,"primary_location":{"id":"doi:10.1109/bibm66473.2025.11357102","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibm66473.2025.11357102","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2025 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5124215142","display_name":"Sophie Haar","orcid":null},"institutions":[{"id":"https://openalex.org/I4210103844","display_name":"Sidwell Friends School","ror":"https://ror.org/01dxdky35","country_code":"US","type":"education","lineage":["https://openalex.org/I4210103844"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Sophie Haar","raw_affiliation_strings":["Sidwell Friends School,Washington,D.C.,United States"],"affiliations":[{"raw_affiliation_string":"Sidwell Friends School,Washington,D.C.,United States","institution_ids":["https://openalex.org/I4210103844"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5114236237","display_name":"Ruojun Zhou","orcid":null},"institutions":[{"id":"https://openalex.org/I170897317","display_name":"Duke University","ror":"https://ror.org/00py81415","country_code":"US","type":"education","lineage":["https://openalex.org/I170897317"]},{"id":"https://openalex.org/I4210153043","display_name":"Duke University Hospital","ror":"https://ror.org/04bct7p84","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I4210126298","https://openalex.org/I4210144876","https://openalex.org/I4210144876","https://openalex.org/I4210153043"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ruojun Zhou","raw_affiliation_strings":["Duke University,Durham,N.C.,United States"],"affiliations":[{"raw_affiliation_string":"Duke University,Durham,N.C.,United States","institution_ids":["https://openalex.org/I170897317","https://openalex.org/I4210153043"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5124215142"],"corresponding_institution_ids":["https://openalex.org/I4210103844"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.71626272,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"4865","last_page":"4870"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10158","display_name":"Cancer Immunotherapy and Biomarkers","score":0.14550000429153442,"subfield":{"id":"https://openalex.org/subfields/2730","display_name":"Oncology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10158","display_name":"Cancer Immunotherapy and Biomarkers","score":0.14550000429153442,"subfield":{"id":"https://openalex.org/subfields/2730","display_name":"Oncology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10580","display_name":"Immunotherapy and Immune Responses","score":0.13930000364780426,"subfield":{"id":"https://openalex.org/subfields/2403","display_name":"Immunology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10550","display_name":"Ovarian cancer diagnosis and treatment","score":0.11840000003576279,"subfield":{"id":"https://openalex.org/subfields/2743","display_name":"Reproductive Medicine"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/subtyping","display_name":"Subtyping","score":0.9180999994277954},{"id":"https://openalex.org/keywords/ovarian-cancer","display_name":"Ovarian cancer","score":0.6995000243186951},{"id":"https://openalex.org/keywords/ovarian-carcinoma","display_name":"Ovarian carcinoma","score":0.5874000191688538},{"id":"https://openalex.org/keywords/disease","display_name":"Disease","score":0.5821999907493591},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.5669000148773193},{"id":"https://openalex.org/keywords/clear-cell","display_name":"Clear cell","score":0.4481000006198883},{"id":"https://openalex.org/keywords/stage","display_name":"Stage (stratigraphy)","score":0.3853999972343445},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.3750999867916107}],"concepts":[{"id":"https://openalex.org/C83852419","wikidata":"https://www.wikidata.org/wiki/Q2713292","display_name":"Subtyping","level":2,"score":0.9180999994277954},{"id":"https://openalex.org/C2780427987","wikidata":"https://www.wikidata.org/wiki/Q172341","display_name":"Ovarian cancer","level":3,"score":0.6995000243186951},{"id":"https://openalex.org/C3019054536","wikidata":"https://www.wikidata.org/wiki/Q172341","display_name":"Ovarian carcinoma","level":4,"score":0.5874000191688538},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.5859000086784363},{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.5821999907493591},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.5669000148773193},{"id":"https://openalex.org/C502942594","wikidata":"https://www.wikidata.org/wiki/Q3421914","display_name":"Cancer research","level":1,"score":0.49540001153945923},{"id":"https://openalex.org/C2778560582","wikidata":"https://www.wikidata.org/wiki/Q18347894","display_name":"Clear cell","level":3,"score":0.4481000006198883},{"id":"https://openalex.org/C146357865","wikidata":"https://www.wikidata.org/wiki/Q1123245","display_name":"Stage (stratigraphy)","level":2,"score":0.3853999972343445},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.3750999867916107},{"id":"https://openalex.org/C2777546739","wikidata":"https://www.wikidata.org/wiki/Q33525","display_name":"Carcinoma","level":2,"score":0.3709999918937683},{"id":"https://openalex.org/C121608353","wikidata":"https://www.wikidata.org/wiki/Q12078","display_name":"Cancer","level":2,"score":0.3643999993801117},{"id":"https://openalex.org/C143998085","wikidata":"https://www.wikidata.org/wiki/Q162555","display_name":"Oncology","level":1,"score":0.3467000126838684},{"id":"https://openalex.org/C1491633281","wikidata":"https://www.wikidata.org/wiki/Q7868","display_name":"Cell","level":2,"score":0.3422999978065491},{"id":"https://openalex.org/C2778324911","wikidata":"https://www.wikidata.org/wiki/Q9631","display_name":"Ovary","level":2,"score":0.33559998869895935},{"id":"https://openalex.org/C2781199814","wikidata":"https://www.wikidata.org/wiki/Q18556242","display_name":"Clear cell carcinoma","level":3,"score":0.30570000410079956},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.289000004529953},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.2678999900817871},{"id":"https://openalex.org/C2908651487","wikidata":"https://www.wikidata.org/wiki/Q172341","display_name":"Ovarian carcinomas","level":5,"score":0.26759999990463257},{"id":"https://openalex.org/C189014844","wikidata":"https://www.wikidata.org/wiki/Q189118","display_name":"Cell type","level":3,"score":0.2590000033378601},{"id":"https://openalex.org/C203014093","wikidata":"https://www.wikidata.org/wiki/Q101929","display_name":"Immunology","level":1,"score":0.2533000111579895},{"id":"https://openalex.org/C162317418","wikidata":"https://www.wikidata.org/wiki/Q252857","display_name":"Transcriptome","level":4,"score":0.25270000100135803}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/bibm66473.2025.11357102","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibm66473.2025.11357102","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2025 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":14,"referenced_works":["https://openalex.org/W1966107523","https://openalex.org/W2000586809","https://openalex.org/W2088899370","https://openalex.org/W2099900951","https://openalex.org/W2438866487","https://openalex.org/W2466343307","https://openalex.org/W2902483197","https://openalex.org/W2965579739","https://openalex.org/W3119005666","https://openalex.org/W4221119756","https://openalex.org/W4225137791","https://openalex.org/W4315498318","https://openalex.org/W4317708737","https://openalex.org/W4392518114"],"related_works":[],"abstract_inverted_index":{"Molecular":[0],"subtyping":[1],"is":[2,45],"essential":[3],"in":[4,27,33,54,66,82,132,167,179],"ovarian":[5,55,83],"cancer":[6],"due":[7],"to":[8,72,99],"its":[9],"clinically":[10],"diverse":[11,31],"and":[12,51,123,145,171],"molecularly":[13],"heterogeneous":[14],"disease":[15,34,124],"nature.":[16],"It":[17],"has":[18,191],"been":[19],"reported":[20],"that":[21,64],"<tex":[22,40],"xmlns:mml=\"http://www.w3.org/1998/Math/MathML\"":[23,41],"xmlns:xlink=\"http://www.w3.org/1999/xlink\">$\\mathbf{B}$</tex>":[24,42],"cell":[25,43,147],"responses":[26],"solid":[28],"tumors":[29],"play":[30],"roles":[32],"progression.":[35],"Thus,":[36],"the":[37,58,94,100,107,135,150,164,175],"identification":[38],"of":[39,111,118,142,152,177],"subtypes":[44,81],"crucial":[46],"for":[47,198],"understanding":[48],"their":[49],"importance":[50],"therapeutic":[52,196],"potential":[53,195],"cancer.":[56],"In":[57,159],"current":[59],"study,":[60],"we":[61,114],"utilized":[62],"genes":[63],"up-regulated":[65],"B":[67],"Lymphocytes":[68],"stimulated":[69],"by":[70],"Anti-IgM":[71],"perform":[73],"unsupervised":[74],"clustering.":[75],"We":[76],"successfully":[77],"identified":[78],"three":[79,136],"consensus":[80],"cancer,":[84],"each":[85],"demonstrating":[86],"distinct":[87],"progression":[88],"patterns.":[89],"Notably,":[90],"Subtype":[91,138,169,172],"3":[92],"exhibited":[93],"worst":[95],"progressionfree":[96],"survival":[97],"compared":[98],"other":[101],"two":[102],"clusters.":[103],"To":[104],"further":[105],"elucidate":[106],"underlying":[108],"biological":[109],"mechanisms":[110],"these":[112,180],"subtypes,":[113],"conducted":[115],"comparative":[116],"analyses":[117,127],"patient":[119],"age,":[120],"tumor":[121],"morphology,":[122],"stage.":[125],"Our":[126],"revealed":[128],"no":[129],"significant":[130],"difference":[131],"age":[133],"among":[134],"subtypes.":[137],"1":[139],"predominantly":[140],"consisted":[141],"endometrioid":[143,161],"carcinoma":[144,162],"clear":[146],"carcinoma,":[148],"with":[149,174],"majority":[151,176],"cases":[153,178],"being":[154,182],"classified":[155,183],"as":[156,184],"stage":[157,185],"1.":[158],"contrast,":[160],"was":[163],"predominant":[165],"subtype":[166],"both":[168],"2":[170],"3,":[173],"clusters":[181],"3.":[186],"Taken":[187],"together,":[188],"our":[189],"study":[190],"provided":[192],"insights":[193],"into":[194],"strategies":[197],"future":[199],"clinical":[200],"practice.":[201]},"counts_by_year":[],"updated_date":"2026-02-01T03:34:12.195049","created_date":"2026-01-30T00:00:00"}
