{"id":"https://openalex.org/W7126111783","doi":"https://doi.org/10.1109/bibm66473.2025.11356395","title":"RTCDB: A Multi-Omics Database Supporting Research and Discovery in Rare Tumor Oncology","display_name":"RTCDB: A Multi-Omics Database Supporting Research and Discovery in Rare Tumor Oncology","publication_year":2025,"publication_date":"2025-12-15","ids":{"openalex":"https://openalex.org/W7126111783","doi":"https://doi.org/10.1109/bibm66473.2025.11356395"},"language":null,"primary_location":{"id":"doi:10.1109/bibm66473.2025.11356395","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibm66473.2025.11356395","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2025 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5102608590","display_name":"Yunyun Su","orcid":null},"institutions":[{"id":"https://openalex.org/I20942203","display_name":"Hainan University","ror":"https://ror.org/03q648j11","country_code":"CN","type":"education","lineage":["https://openalex.org/I20942203"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Yunyun Su","raw_affiliation_strings":["School of Computer Science and Technology, Hainan University,Haikou,China"],"affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology, Hainan University,Haikou,China","institution_ids":["https://openalex.org/I20942203"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5121455294","display_name":"Binlu Yang","orcid":null},"institutions":[{"id":"https://openalex.org/I20942203","display_name":"Hainan University","ror":"https://ror.org/03q648j11","country_code":"CN","type":"education","lineage":["https://openalex.org/I20942203"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Binlu Yang","raw_affiliation_strings":["School of Computer Science and Technology, Hainan University,Haikou,China"],"affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology, Hainan University,Haikou,China","institution_ids":["https://openalex.org/I20942203"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5114270411","display_name":"Aoyun Geng","orcid":"https://orcid.org/0009-0004-9716-9415"},"institutions":[{"id":"https://openalex.org/I20942203","display_name":"Hainan University","ror":"https://ror.org/03q648j11","country_code":"CN","type":"education","lineage":["https://openalex.org/I20942203"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Aoyun Geng","raw_affiliation_strings":["School of Computer Science and Technology, Hainan University,Haikou,China"],"affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology, Hainan University,Haikou,China","institution_ids":["https://openalex.org/I20942203"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5032709994","display_name":"Yijia Chen","orcid":"https://orcid.org/0000-0002-9295-5028"},"institutions":[{"id":"https://openalex.org/I20942203","display_name":"Hainan University","ror":"https://ror.org/03q648j11","country_code":"CN","type":"education","lineage":["https://openalex.org/I20942203"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yuxuan Chen","raw_affiliation_strings":["School of Computer Science and Technology, Hainan University,Haikou,China"],"affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology, Hainan University,Haikou,China","institution_ids":["https://openalex.org/I20942203"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5124226907","display_name":"Zilong Zhang","orcid":null},"institutions":[{"id":"https://openalex.org/I20942203","display_name":"Hainan University","ror":"https://ror.org/03q648j11","country_code":"CN","type":"education","lineage":["https://openalex.org/I20942203"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zilong Zhang","raw_affiliation_strings":["School of Computer Science and Technology, Hainan University,Haikou,China"],"affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology, Hainan University,Haikou,China","institution_ids":["https://openalex.org/I20942203"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5123366716","display_name":"Feifei Cui","orcid":null},"institutions":[{"id":"https://openalex.org/I20942203","display_name":"Hainan University","ror":"https://ror.org/03q648j11","country_code":"CN","type":"education","lineage":["https://openalex.org/I20942203"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Feifei Cui","raw_affiliation_strings":["School of Computer Science and Technology, Hainan University,Haikou,China"],"affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology, Hainan University,Haikou,China","institution_ids":["https://openalex.org/I20942203"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5102608590"],"corresponding_institution_ids":["https://openalex.org/I20942203"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.65239432,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"556","last_page":"561"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12820","display_name":"Chromatin Remodeling and Cancer","score":0.2712000012397766,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12820","display_name":"Chromatin Remodeling and Cancer","score":0.2712000012397766,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11642","display_name":"Genomics and Rare Diseases","score":0.11169999837875366,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12422","display_name":"Radiomics and Machine Learning in Medical Imaging","score":0.04659999907016754,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/dilemma","display_name":"Dilemma","score":0.4571000039577484},{"id":"https://openalex.org/keywords/precision-oncology","display_name":"Precision oncology","score":0.4311999976634979},{"id":"https://openalex.org/keywords/cancer","display_name":"Cancer","score":0.3986999988555908},{"id":"https://openalex.org/keywords/resource","display_name":"Resource (disambiguation)","score":0.3474999964237213},{"id":"https://openalex.org/keywords/process","display_name":"Process (computing)","score":0.3425999879837036},{"id":"https://openalex.org/keywords/clinical-research","display_name":"Clinical research","score":0.3384000062942505}],"concepts":[{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.5351999998092651},{"id":"https://openalex.org/C2778496695","wikidata":"https://www.wikidata.org/wiki/Q254128","display_name":"Dilemma","level":2,"score":0.4571000039577484},{"id":"https://openalex.org/C3020497934","wikidata":"https://www.wikidata.org/wiki/Q17075943","display_name":"Precision oncology","level":3,"score":0.4311999976634979},{"id":"https://openalex.org/C121608353","wikidata":"https://www.wikidata.org/wiki/Q12078","display_name":"Cancer","level":2,"score":0.3986999988555908},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.3887999951839447},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.3652999997138977},{"id":"https://openalex.org/C206345919","wikidata":"https://www.wikidata.org/wiki/Q20380951","display_name":"Resource (disambiguation)","level":2,"score":0.3474999964237213},{"id":"https://openalex.org/C98045186","wikidata":"https://www.wikidata.org/wiki/Q205663","display_name":"Process (computing)","level":2,"score":0.3425999879837036},{"id":"https://openalex.org/C502991105","wikidata":"https://www.wikidata.org/wiki/Q5133849","display_name":"Clinical research","level":2,"score":0.3384000062942505},{"id":"https://openalex.org/C2779473830","wikidata":"https://www.wikidata.org/wiki/Q1540899","display_name":"MEDLINE","level":2,"score":0.32820001244544983},{"id":"https://openalex.org/C2779701055","wikidata":"https://www.wikidata.org/wiki/Q929833","display_name":"Rare disease","level":3,"score":0.2854999899864197},{"id":"https://openalex.org/C19527891","wikidata":"https://www.wikidata.org/wiki/Q1120908","display_name":"Medical physics","level":1,"score":0.27390000224113464},{"id":"https://openalex.org/C535046627","wikidata":"https://www.wikidata.org/wiki/Q30612","display_name":"Clinical trial","level":2,"score":0.26600000262260437},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.2574000060558319},{"id":"https://openalex.org/C2781197716","wikidata":"https://www.wikidata.org/wiki/Q864574","display_name":"Biomarker","level":2,"score":0.25369998812675476},{"id":"https://openalex.org/C3019816032","wikidata":"https://www.wikidata.org/wiki/Q2575340","display_name":"Cancer treatment","level":3,"score":0.25060001015663147}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/bibm66473.2025.11356395","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibm66473.2025.11356395","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2025 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G8875385470","display_name":null,"funder_award_id":"62262015","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":39,"referenced_works":["https://openalex.org/W1545047539","https://openalex.org/W1772419959","https://openalex.org/W2022914839","https://openalex.org/W2126438085","https://openalex.org/W2167980479","https://openalex.org/W2231968663","https://openalex.org/W2236822143","https://openalex.org/W2245948944","https://openalex.org/W2892078430","https://openalex.org/W2916969759","https://openalex.org/W2921650138","https://openalex.org/W2989824398","https://openalex.org/W2991957155","https://openalex.org/W2995074379","https://openalex.org/W2998197281","https://openalex.org/W3009950082","https://openalex.org/W3092096660","https://openalex.org/W3122244534","https://openalex.org/W3130845439","https://openalex.org/W3161211885","https://openalex.org/W3172602094","https://openalex.org/W3184943643","https://openalex.org/W3185563002","https://openalex.org/W4205164043","https://openalex.org/W4210499274","https://openalex.org/W4212972454","https://openalex.org/W4220837089","https://openalex.org/W4223896689","https://openalex.org/W4244970282","https://openalex.org/W4281941318","https://openalex.org/W4292166992","https://openalex.org/W4297855270","https://openalex.org/W4377292628","https://openalex.org/W4379521442","https://openalex.org/W4385760022","https://openalex.org/W4390971248","https://openalex.org/W4392252176","https://openalex.org/W4406655168","https://openalex.org/W4409695922"],"related_works":[],"abstract_inverted_index":{"Rare":[0],"tumors":[1],"are":[2,86],"generally":[3],"faced":[4],"with":[5,164],"the":[6,30,42,53,71,133,137,177],"dilemma":[7],"of":[8,12,32,45,56,64,73,99,118,144,169,183],"delayed":[9],"diagnosis,":[10],"lack":[11,63],"treatment":[13],"methods":[14],"and":[15,35,62,105,108,115,126,140,160,180],"poor":[16],"prognosis":[17],"due":[18],"to":[19,40,76,81,88,103],"their":[20],"high":[21],"clinical":[22,36,43,77,116,141],"heterogeneity,":[23],"low":[24],"incidence":[25],"but":[26],"numerous":[27],"subtypes.":[28],"Although":[29],"analysis":[31],"molecular":[33],"mechanisms":[34],"characteristics":[37],"is":[38,50,102],"crucial":[39],"improving":[41],"research":[44,49,75,139],"rare":[46,91,120,145,157,171],"tumors,":[47],"current":[48],"limited":[51],"by":[52],"scattered":[54],"heterogeneity":[55],"multi-center":[57],"data,":[58],"scarce":[59],"sample":[60],"size":[61],"standardized":[65],"integration":[66],"mechanism,":[67],"which":[68],"seriously":[69],"hinders":[70],"process":[72],"basic":[74,138],"transformation.":[78],"In":[79],"order":[80],"meet":[82],"such":[83],"challenges,":[84],"we":[85],"committed":[87],"building":[89],"a":[90,124],"tumor":[92,121,158,172],"comprehensive":[93],"database":[94,148,173],"website.":[95],"The":[96,147,167],"core":[97],"goal":[98],"this":[100,170],"platform":[101],"aggregate":[104],"provide":[106],"high-quality":[107],"reliable":[109],"datasets":[110,163],"(including":[111],"genome,":[112],"transcriptome,":[113],"proteome":[114],"information)":[117],"various":[119],"types,":[122],"providing":[123],"centralized":[125],"efficient":[127],"resource":[128],"center":[129],"for":[130,190],"researchers":[131],"around":[132],"world,":[134],"thereby":[135],"accelerating":[136],"transformation":[142],"exploration":[143],"tumors.":[146],"website":[149],"(RTCDB)":[150],"contains":[151],"<tex":[152],"xmlns:mml=\"http://www.w3.org/1998/Math/MathML\"":[153],"xmlns:xlink=\"http://www.w3.org/1999/xlink\">$\\mathbf{1":[154],"3":[155],"4}$</tex>":[156],"types":[159],"306":[161],"selected":[162],"7912":[165],"samples.":[166],"establishment":[168],"will":[174],"strongly":[175],"promote":[176],"collaborative":[178],"cooperation":[179],"rapid":[181],"development":[182],"related":[184],"research.":[185],"RTCDB":[186],"can":[187],"be":[188],"accessed":[189],"free":[191],"at":[192],"http://www.rtedb.cn/.":[193]},"counts_by_year":[],"updated_date":"2026-04-09T08:11:56.329763","created_date":"2026-01-30T00:00:00"}
