{"id":"https://openalex.org/W7126117517","doi":"https://doi.org/10.1109/bibm66473.2025.11356328","title":"Adapting 2D Foundation Models for Parkinson's Disease Diagnosis on 3D Brain MRI Images","display_name":"Adapting 2D Foundation Models for Parkinson's Disease Diagnosis on 3D Brain MRI Images","publication_year":2025,"publication_date":"2025-12-15","ids":{"openalex":"https://openalex.org/W7126117517","doi":"https://doi.org/10.1109/bibm66473.2025.11356328"},"language":null,"primary_location":{"id":"doi:10.1109/bibm66473.2025.11356328","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibm66473.2025.11356328","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2025 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5102087504","display_name":"Xuanyan Wu","orcid":"https://orcid.org/0009-0006-2076-1204"},"institutions":[{"id":"https://openalex.org/I47720641","display_name":"Huazhong University of Science and Technology","ror":"https://ror.org/00p991c53","country_code":"CN","type":"education","lineage":["https://openalex.org/I47720641"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Xuanyan Wu","raw_affiliation_strings":["School of Artificial Intelligence and Automation, Huazhong University of Science and Technology,Wuhan,China"],"affiliations":[{"raw_affiliation_string":"School of Artificial Intelligence and Automation, Huazhong University of Science and Technology,Wuhan,China","institution_ids":["https://openalex.org/I47720641"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5106670276","display_name":"Jianxing Liu","orcid":"https://orcid.org/0000-0002-2201-3887"},"institutions":[{"id":"https://openalex.org/I47720641","display_name":"Huazhong University of Science and Technology","ror":"https://ror.org/00p991c53","country_code":"CN","type":"education","lineage":["https://openalex.org/I47720641"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jiahao Liu","raw_affiliation_strings":["School of Artificial Intelligence and Automation, Huazhong University of Science and Technology,Wuhan,China"],"affiliations":[{"raw_affiliation_string":"School of Artificial Intelligence and Automation, Huazhong University of Science and Technology,Wuhan,China","institution_ids":["https://openalex.org/I47720641"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103572490","display_name":"Jun Cheng","orcid":null},"institutions":[{"id":"https://openalex.org/I47720641","display_name":"Huazhong University of Science and Technology","ror":"https://ror.org/00p991c53","country_code":"CN","type":"education","lineage":["https://openalex.org/I47720641"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jun Cheng","raw_affiliation_strings":["School of Artificial Intelligence and Automation, Huazhong University of Science and Technology,Wuhan,China"],"affiliations":[{"raw_affiliation_string":"School of Artificial Intelligence and Automation, Huazhong University of Science and Technology,Wuhan,China","institution_ids":["https://openalex.org/I47720641"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5124190864","display_name":"Xuping Huang","orcid":null},"institutions":[{"id":"https://openalex.org/I47720641","display_name":"Huazhong University of Science and Technology","ror":"https://ror.org/00p991c53","country_code":"CN","type":"education","lineage":["https://openalex.org/I47720641"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xuping Huang","raw_affiliation_strings":["School of Artificial Intelligence and Automation, Huazhong University of Science and Technology,Wuhan,China"],"affiliations":[{"raw_affiliation_string":"School of Artificial Intelligence and Automation, Huazhong University of Science and Technology,Wuhan,China","institution_ids":["https://openalex.org/I47720641"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5124254926","display_name":"Shan Tan","orcid":null},"institutions":[{"id":"https://openalex.org/I47720641","display_name":"Huazhong University of Science and Technology","ror":"https://ror.org/00p991c53","country_code":"CN","type":"education","lineage":["https://openalex.org/I47720641"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Shan Tan","raw_affiliation_strings":["School of Artificial Intelligence and Automation, Huazhong University of Science and Technology,Wuhan,China"],"affiliations":[{"raw_affiliation_string":"School of Artificial Intelligence and Automation, Huazhong University of Science and Technology,Wuhan,China","institution_ids":["https://openalex.org/I47720641"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5102087504"],"corresponding_institution_ids":["https://openalex.org/I47720641"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.84117023,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"4249","last_page":"4252"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T13702","display_name":"Machine Learning in Healthcare","score":0.2581000030040741,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T13702","display_name":"Machine Learning in Healthcare","score":0.2581000030040741,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10036","display_name":"Advanced Neural Network Applications","score":0.07599999755620956,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10775","display_name":"Generative Adversarial Networks and Image Synthesis","score":0.07240000367164612,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/foundation","display_name":"Foundation (evidence)","score":0.6383000016212463},{"id":"https://openalex.org/keywords/medical-imaging","display_name":"Medical imaging","score":0.5013999938964844},{"id":"https://openalex.org/keywords/generalization","display_name":"Generalization","score":0.492900013923645},{"id":"https://openalex.org/keywords/representation","display_name":"Representation (politics)","score":0.3939000070095062},{"id":"https://openalex.org/keywords/magnetic-resonance-imaging","display_name":"Magnetic resonance imaging","score":0.3734000027179718},{"id":"https://openalex.org/keywords/limiting","display_name":"Limiting","score":0.3206000030040741}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6638000011444092},{"id":"https://openalex.org/C2780966255","wikidata":"https://www.wikidata.org/wiki/Q5474306","display_name":"Foundation (evidence)","level":2,"score":0.6383000016212463},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.6340000033378601},{"id":"https://openalex.org/C31601959","wikidata":"https://www.wikidata.org/wiki/Q931309","display_name":"Medical imaging","level":2,"score":0.5013999938964844},{"id":"https://openalex.org/C177148314","wikidata":"https://www.wikidata.org/wiki/Q170084","display_name":"Generalization","level":2,"score":0.492900013923645},{"id":"https://openalex.org/C2776359362","wikidata":"https://www.wikidata.org/wiki/Q2145286","display_name":"Representation (politics)","level":3,"score":0.3939000070095062},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.39169999957084656},{"id":"https://openalex.org/C143409427","wikidata":"https://www.wikidata.org/wiki/Q161238","display_name":"Magnetic resonance imaging","level":2,"score":0.3734000027179718},{"id":"https://openalex.org/C188198153","wikidata":"https://www.wikidata.org/wiki/Q1613840","display_name":"Limiting","level":2,"score":0.3206000030040741},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.31709998846054077},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.31290000677108765},{"id":"https://openalex.org/C2991673738","wikidata":"https://www.wikidata.org/wiki/Q5062122","display_name":"Brain disease","level":3,"score":0.3125999867916107},{"id":"https://openalex.org/C66024118","wikidata":"https://www.wikidata.org/wiki/Q1122506","display_name":"Computational model","level":2,"score":0.299699991941452},{"id":"https://openalex.org/C58693492","wikidata":"https://www.wikidata.org/wiki/Q551875","display_name":"Neuroimaging","level":2,"score":0.28850001096725464},{"id":"https://openalex.org/C3019007443","wikidata":"https://www.wikidata.org/wiki/Q568742","display_name":"3d model","level":2,"score":0.2824000120162964},{"id":"https://openalex.org/C13483470","wikidata":"https://www.wikidata.org/wiki/Q1470152","display_name":"Coronal plane","level":2,"score":0.25609999895095825}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/bibm66473.2025.11356328","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibm66473.2025.11356328","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2025 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G3043370997","display_name":null,"funder_award_id":"62071197,62471192","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":11,"referenced_works":["https://openalex.org/W3034552520","https://openalex.org/W3092783643","https://openalex.org/W3158631207","https://openalex.org/W4200516007","https://openalex.org/W4361026034","https://openalex.org/W4389053061","https://openalex.org/W4400324640","https://openalex.org/W4400351997","https://openalex.org/W4408173723","https://openalex.org/W4408442223","https://openalex.org/W4411986160"],"related_works":[],"abstract_inverted_index":{"Foundation":[0],"models":[1,20,42,76,98,126,169],"have":[2],"demonstrated":[3],"significant":[4],"potential":[5],"in":[6,55],"medical":[7,31],"AI":[8],"due":[9],"to":[10,43,50,70,101,127,158,170],"their":[11],"strong":[12],"representation":[13],"and":[14,136,143,162,165],"generalization":[15],"capabilities.":[16],"Most":[17],"existing":[18],"foundation":[19,41,75,97,125,168],"are":[21],"trained":[22],"on":[23],"2D":[24,40,74,96],"data":[25],"for":[26,77,124],"slice-based":[27],"diagnosis.":[28],"However,":[29],"accurate":[30],"diagnosis":[32,80],"often":[33],"requires":[34],"comprehensive":[35],"3D":[36,47,82,155],"spatial":[37,53,111,173],"context.":[38],"Applying":[39],"individual":[44],"slices":[45,132],"from":[46,133],"volumes":[48],"fails":[49],"utilize":[51],"rich":[52],"information":[54],"volumetric":[56],"data,":[57],"limiting":[58],"diagnostic":[59,116,144],"performance.":[60],"To":[61],"bridge":[62],"this":[63],"2D-3D":[64],"gap,":[65],"we":[66,88,118,152],"propose":[67,153],"a":[68,90,120,154],"method":[69,180],"effectively":[71],"adapt":[72,167],"pretrained":[73],"Parkinson's":[78],"disease":[79],"using":[81,185],"brain":[83],"magnetic":[84],"resonance":[85],"images.":[86],"Specifically,":[87],"introduce":[89],"multi-scale":[91],"fusion":[92],"module":[93,157],"into":[94],"representative":[95],"(e.g.,":[99],"BioMedCLIP)":[100],"generate":[102],"scale-aware":[103],"semantic":[104],"features":[105,161],"that":[106,178],"capture":[107,159],"lesion":[108],"characteristics":[109],"across":[110],"resolutions.":[112],"Inspired":[113],"by":[114,146],"radiologists'":[115],"practices,":[117],"design":[119],"multi-plane":[121],"slice":[122],"selector":[123],"identify":[128],"the":[129],"most":[130],"informative":[131],"axial,":[134],"sagittal,":[135],"coronal":[137],"planes.":[138],"This":[139],"enhances":[140],"computational":[141],"efficiency":[142],"accuracy":[145],"leveraging":[147],"diverse":[148],"anatomical":[149],"perspectives.":[150],"Furthermore,":[151],"adapter":[156],"intra-slice":[160],"inter-slice":[163],"dependencies,":[164],"meanwhile":[166],"learn":[171],"long-range":[172],"relationships.":[174],"Experimental":[175],"results":[176],"demonstrate":[177],"our":[179],"outperforms":[181],"state-of-theart":[182],"methods":[183],"while":[184],"fewer":[186],"learnable":[187],"parameters.":[188]},"counts_by_year":[],"updated_date":"2026-04-09T08:11:56.329763","created_date":"2026-01-30T00:00:00"}
