{"id":"https://openalex.org/W4406260086","doi":"https://doi.org/10.1109/bibm62325.2024.10822307","title":"Unsupervised Metabolomic Analysis for Detecting Early-warning Signals during Progression of Colorectal Cancer","display_name":"Unsupervised Metabolomic Analysis for Detecting Early-warning Signals during Progression of Colorectal Cancer","publication_year":2024,"publication_date":"2024-12-03","ids":{"openalex":"https://openalex.org/W4406260086","doi":"https://doi.org/10.1109/bibm62325.2024.10822307"},"language":"en","primary_location":{"id":"doi:10.1109/bibm62325.2024.10822307","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibm62325.2024.10822307","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2024 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5104338919","display_name":"Minglei Pan","orcid":null},"institutions":[{"id":"https://openalex.org/I19820366","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35","country_code":"CN","type":"government","lineage":["https://openalex.org/I19820366"]},{"id":"https://openalex.org/I4210145761","display_name":"Shenzhen Institutes of Advanced Technology","ror":"https://ror.org/04gh4er46","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210145761"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Minglei Pan","raw_affiliation_strings":["Chinese Academy of Sciences,Shenzhen Institute of Advanced Technology,Shenzhen,China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Chinese Academy of Sciences,Shenzhen Institute of Advanced Technology,Shenzhen,China","institution_ids":["https://openalex.org/I19820366","https://openalex.org/I4210145761"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5089751883","display_name":"Zeng-Ding Liu","orcid":"https://orcid.org/0000-0003-2878-5367"},"institutions":[{"id":"https://openalex.org/I19820366","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35","country_code":"CN","type":"government","lineage":["https://openalex.org/I19820366"]},{"id":"https://openalex.org/I4210145761","display_name":"Shenzhen Institutes of Advanced Technology","ror":"https://ror.org/04gh4er46","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210145761"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zengding Liu","raw_affiliation_strings":["Chinese Academy of Sciences,Shenzhen Institute of Advanced Technology,Shenzhen,China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Chinese Academy of Sciences,Shenzhen Institute of Advanced Technology,Shenzhen,China","institution_ids":["https://openalex.org/I19820366","https://openalex.org/I4210145761"]}]},{"author_position":"last","author":{"id":null,"display_name":"Fen Miao","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Fen Miao","raw_affiliation_strings":["University of Electronic Science and Technology of China,Shenzhen Institute for Advanced Study,Shenzhen,China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Electronic Science and Technology of China,Shenzhen Institute for Advanced Study,Shenzhen,China","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.31326977,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"4379","last_page":"4383"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":0.965499997138977,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":0.965499997138977,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/colorectal-cancer","display_name":"Colorectal cancer","score":0.7683185338973999},{"id":"https://openalex.org/keywords/metabolomics","display_name":"Metabolomics","score":0.5823209881782532},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5436318516731262},{"id":"https://openalex.org/keywords/cancer","display_name":"Cancer","score":0.40900522470474243},{"id":"https://openalex.org/keywords/internal-medicine","display_name":"Internal medicine","score":0.29422152042388916},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.27495232224464417},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.22298353910446167},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.1457691490650177}],"concepts":[{"id":"https://openalex.org/C526805850","wikidata":"https://www.wikidata.org/wiki/Q188874","display_name":"Colorectal cancer","level":3,"score":0.7683185338973999},{"id":"https://openalex.org/C21565614","wikidata":"https://www.wikidata.org/wiki/Q12149006","display_name":"Metabolomics","level":2,"score":0.5823209881782532},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5436318516731262},{"id":"https://openalex.org/C121608353","wikidata":"https://www.wikidata.org/wiki/Q12078","display_name":"Cancer","level":2,"score":0.40900522470474243},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.29422152042388916},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.27495232224464417},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.22298353910446167},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.1457691490650177}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/bibm62325.2024.10822307","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibm62325.2024.10822307","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2024 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.75,"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3"}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":15,"referenced_works":["https://openalex.org/W2001258296","https://openalex.org/W2035471593","https://openalex.org/W2163235555","https://openalex.org/W2508622936","https://openalex.org/W2907471989","https://openalex.org/W2949004447","https://openalex.org/W3004801523","https://openalex.org/W3036349022","https://openalex.org/W3178723556","https://openalex.org/W3201973951","https://openalex.org/W3202280027","https://openalex.org/W4223639089","https://openalex.org/W4285160471","https://openalex.org/W4313527182","https://openalex.org/W4387844221"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2899084033","https://openalex.org/W2748952813","https://openalex.org/W4283390424","https://openalex.org/W2137270828","https://openalex.org/W1976072307","https://openalex.org/W4205440119","https://openalex.org/W1561393703","https://openalex.org/W4292104203","https://openalex.org/W2040768604"],"abstract_inverted_index":{"Colorectal":[0],"cancer":[1,40,48],"(CRC)":[2],"affects":[3],"over":[4],"2.5":[5],"million":[6],"people":[7],"globally":[8],"each":[9],"year,":[10],"with":[11],"the":[12,18,32,58,68,78,99,112,122,163,173,203,211,214,223],"majority":[13],"of":[14,20,95,101,140,176,185,193,199,213,226],"cases":[15],"originating":[16],"from":[17,25],"development":[19],"adenomatous":[21],"polyps,":[22],"which":[23,201],"progress":[24],"intramucosal":[26],"carcinoma":[27],"to":[28,57,91,150,153,168,231],"malignant":[29,102],"tumors.":[30],"Identifying":[31],"critical":[33],"point":[34],"(pre-disease":[35],"state)":[36],"and":[37,70,117,206,228],"detecting":[38,196],"early-stage":[39],"for":[41,135,171],"endoscopic":[42],"resection":[43],"are":[44,109,133,148],"primary":[45],"objectives":[46],"in":[47,64,111,162,195,233],"control.":[49],"However,":[50],"these":[51],"tasks":[52],"present":[53],"significant":[54],"challenges":[55],"due":[56],"extremely":[59],"subtle":[60],"or":[61],"negligible":[62],"differences":[63],"gross":[65],"signs":[66],"between":[67],"pre-disease":[69,93,174,197],"healthy":[71],"states.":[72],"In":[73,121],"this":[74],"study,":[75],"inspired":[76],"by":[77],"dynamic":[79],"network":[80,115,123],"biomarker":[81],"(DNB)":[82],"theory,":[83],"we":[84],"propose":[85],"E-DNB,":[86],"an":[87,191],"unsupervised":[88],"graph-based":[89],"model,":[90],"detect":[92],"state":[94,175,198],"CRC":[96,141,186],"deterioration":[97],"before":[98],"onset":[100],"tumors":[103],"using":[104,142],"metabolize":[105],"data.":[106,144],"Two":[107],"stages":[108,139,184],"involved":[110],"E-DNB":[113,189],"model:":[114],"construction":[116,124],"graph":[118,164],"similarity":[119,156,165],"learning.":[120],"stage,":[125,167],"individual":[126,146],"networks":[127,147,152],"based":[128,157],"on":[129,158,179],"Pearson":[130],"correlation":[131],"coefficients":[132],"constructed":[134],"subjects":[136,181],"at":[137,182],"different":[138],"metabolomics":[143],"Subsequently,":[145],"compared":[149],"baseline":[151],"measure":[154],"their":[155],"squared":[159],"Euclidean":[160],"distance":[161],"learning":[166],"generate":[169],"DNB":[170,205],"identifying":[172],"CRCs.":[177],"Experiments":[178],"220":[180],"various":[183],"demonstrate":[187],"that":[188],"achieves":[190],"AUC":[192],"71%":[194],"CRCs,":[200],"exceeds":[202],"current":[204],"popular":[207],"supervised":[208],"methods,":[209],"demonstrating":[210],"performance":[212],"proposed":[215],"E-DNB.":[216],"Our":[217],"findings":[218],"offer":[219],"novel":[220],"insights":[221],"into":[222],"early":[224],"diagnosis":[225],"CRCs":[227],"may":[229],"contribute":[230],"advancements":[232],"addressing":[234],"complex":[235],"diseases.":[236]},"counts_by_year":[],"updated_date":"2026-07-29T14:22:42.915294","created_date":"2025-10-10T00:00:00"}
