{"id":"https://openalex.org/W4406259891","doi":"https://doi.org/10.1109/bibm62325.2024.10821921","title":"Enabling Adaptive CNV Detection through A Novel Predictive Control Framework","display_name":"Enabling Adaptive CNV Detection through A Novel Predictive Control Framework","publication_year":2024,"publication_date":"2024-12-03","ids":{"openalex":"https://openalex.org/W4406259891","doi":"https://doi.org/10.1109/bibm62325.2024.10821921"},"language":"en","primary_location":{"id":"doi:10.1109/bibm62325.2024.10821921","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibm62325.2024.10821921","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2024 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5101861916","display_name":"Yuqian Liu","orcid":"https://orcid.org/0000-0003-1436-3489"},"institutions":[{"id":"https://openalex.org/I87445476","display_name":"Xi'an Jiaotong University","ror":"https://ror.org/017zhmm22","country_code":"CN","type":"education","lineage":["https://openalex.org/I87445476"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yuqian Liu","raw_affiliation_strings":["Xi&#x2019;an Jiaotong University,School of Computer Science and Technology,Xi&#x2019;an,China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Xi&#x2019;an Jiaotong University,School of Computer Science and Technology,Xi&#x2019;an,China","institution_ids":["https://openalex.org/I87445476"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101538526","display_name":"Jing Yuan","orcid":"https://orcid.org/0000-0002-5801-5702"},"institutions":[{"id":"https://openalex.org/I87445476","display_name":"Xi'an Jiaotong University","ror":"https://ror.org/017zhmm22","country_code":"CN","type":"education","lineage":["https://openalex.org/I87445476"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jiajing Yuan","raw_affiliation_strings":["Xi&#x2019;an Jiaotong University,School of Computer Science and Technology,Xi&#x2019;an,China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Xi&#x2019;an Jiaotong University,School of Computer Science and Technology,Xi&#x2019;an,China","institution_ids":["https://openalex.org/I87445476"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100452974","display_name":"Xiaoyan Zhu","orcid":"https://orcid.org/0000-0002-7173-7793"},"institutions":[{"id":"https://openalex.org/I87445476","display_name":"Xi'an Jiaotong University","ror":"https://ror.org/017zhmm22","country_code":"CN","type":"education","lineage":["https://openalex.org/I87445476"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xiaoyan Zhu","raw_affiliation_strings":["Xi&#x2019;an Jiaotong University,School of Computer Science and Technology,Xi&#x2019;an,China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Xi&#x2019;an Jiaotong University,School of Computer Science and Technology,Xi&#x2019;an,China","institution_ids":["https://openalex.org/I87445476"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5047344339","display_name":"Xin Lai","orcid":"https://orcid.org/0000-0003-3850-5680"},"institutions":[{"id":"https://openalex.org/I87445476","display_name":"Xi'an Jiaotong University","ror":"https://ror.org/017zhmm22","country_code":"CN","type":"education","lineage":["https://openalex.org/I87445476"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xin Lai","raw_affiliation_strings":["Xi&#x2019;an Jiaotong University,School of Computer Science and Technology,Xi&#x2019;an,China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Xi&#x2019;an Jiaotong University,School of Computer Science and Technology,Xi&#x2019;an,China","institution_ids":["https://openalex.org/I87445476"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100716157","display_name":"Ruo-Yu Liu","orcid":"https://orcid.org/0000-0003-1576-0961"},"institutions":[{"id":"https://openalex.org/I4210131893","display_name":"Second Affiliated Hospital of Xi'an Jiaotong University","ror":"https://ror.org/03aq7kf18","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210131893"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Ruoyu Liu","raw_affiliation_strings":["The Second Affiliated Hospital of Xi&#x2019;an Jiaotong University,Department of Respiratory and Critical Care Medicine,Xi&#x2019;an,China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"The Second Affiliated Hospital of Xi&#x2019;an Jiaotong University,Department of Respiratory and Critical Care Medicine,Xi&#x2019;an,China","institution_ids":["https://openalex.org/I4210131893"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5024825507","display_name":"Xu\u2010Wen Wang","orcid":"https://orcid.org/0000-0001-7670-3544"},"institutions":[{"id":"https://openalex.org/I4210131893","display_name":"Second Affiliated Hospital of Xi'an Jiaotong University","ror":"https://ror.org/03aq7kf18","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210131893"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xuwen Wang","raw_affiliation_strings":["The Second Affiliated Hospital of Xi&#x2019;an Jiaotong University,Department of Respiratory and Critical Care Medicine,Xi&#x2019;an,China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"The Second Affiliated Hospital of Xi&#x2019;an Jiaotong University,Department of Respiratory and Critical Care Medicine,Xi&#x2019;an,China","institution_ids":["https://openalex.org/I4210131893"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5113900404","display_name":"Jiayin Wang","orcid":null},"institutions":[{"id":"https://openalex.org/I87445476","display_name":"Xi'an Jiaotong University","ror":"https://ror.org/017zhmm22","country_code":"CN","type":"education","lineage":["https://openalex.org/I87445476"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jiayin Wang","raw_affiliation_strings":["Xi&#x2019;an Jiaotong University,School of Computer Science and Technology,Xi&#x2019;an,China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Xi&#x2019;an Jiaotong University,School of Computer Science and Technology,Xi&#x2019;an,China","institution_ids":["https://openalex.org/I87445476"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":7,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.28860562,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"5876","last_page":"5883"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10876","display_name":"Fault Detection and Control Systems","score":0.9241999983787537,"subfield":{"id":"https://openalex.org/subfields/2207","display_name":"Control and Systems Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10876","display_name":"Fault Detection and Control Systems","score":0.9241999983787537,"subfield":{"id":"https://openalex.org/subfields/2207","display_name":"Control and Systems Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6926651000976562},{"id":"https://openalex.org/keywords/model-predictive-control","display_name":"Model predictive control","score":0.5899023413658142},{"id":"https://openalex.org/keywords/control","display_name":"Control (management)","score":0.40583527088165283},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.24293559789657593}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6926651000976562},{"id":"https://openalex.org/C172205157","wikidata":"https://www.wikidata.org/wiki/Q1782962","display_name":"Model predictive control","level":3,"score":0.5899023413658142},{"id":"https://openalex.org/C2775924081","wikidata":"https://www.wikidata.org/wiki/Q55608371","display_name":"Control (management)","level":2,"score":0.40583527088165283},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.24293559789657593}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/bibm62325.2024.10821921","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibm62325.2024.10821921","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2024 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":21,"referenced_works":["https://openalex.org/W1484187172","https://openalex.org/W1983781571","https://openalex.org/W2012151892","https://openalex.org/W2150506261","https://openalex.org/W2169744057","https://openalex.org/W2337209831","https://openalex.org/W2405513305","https://openalex.org/W2513883126","https://openalex.org/W2617530335","https://openalex.org/W2890862979","https://openalex.org/W2949028980","https://openalex.org/W2987572545","https://openalex.org/W3004540857","https://openalex.org/W3011792666","https://openalex.org/W3012203069","https://openalex.org/W3120699274","https://openalex.org/W4294376397","https://openalex.org/W4310490303","https://openalex.org/W4313595227","https://openalex.org/W4391724177","https://openalex.org/W4394917946"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2899084033","https://openalex.org/W2748952813","https://openalex.org/W1990079087","https://openalex.org/W3202234113","https://openalex.org/W2390279801","https://openalex.org/W2101188133","https://openalex.org/W4391913857","https://openalex.org/W2358668433","https://openalex.org/W2556120871"],"abstract_inverted_index":{"Accurate":[0],"detection":[1,22,51,60,78,186],"of":[2,37,92,179,190],"copy":[3],"number":[4],"variations":[5],"(CNVs)":[6],"from":[7,125,164,234],"sequencing":[8,127,181],"data":[9],"is":[10,217],"crucial":[11],"in":[12,28,210,228],"many":[13,20],"complex":[14],"traits":[15],"and":[16,49,67,135],"diseases":[17],"research.":[18],"Although":[19],"CNV":[21,59,77,243],"algorithms":[23,39],"have":[24,225],"been":[25],"developed,":[26],"challenges":[27],"precisely":[29],"identifying":[30],"CNVs":[31],"persist.":[32],"The":[33,188,214],"core":[34],"statistical":[35],"model":[36,144],"these":[38],"cannot":[40],"self-adjust,":[41],"which":[42,223],"limits":[43],"their":[44],"adaptability":[45],"to":[46,107],"heterogeneous":[47],"samples":[48],"reduces":[50],"accuracy.":[52],"address":[53],"this":[54,191],"challenge,":[55],"we":[56],"reframed":[57],"the":[58,112,157,177,202,206],"problem":[61],"as":[62],"a":[63,74,101,239],"quality":[64,235],"control":[65,146,170,236],"issue":[66],"incorporated":[68],"adaptive":[69,76,143,169],"mechanisms.":[70],"We":[71,99,117],"developed":[72],"adapCNV,":[73],"novel":[75,232],"framework":[79,88,192,216],"that":[80,201],"integrates":[81],"machine":[82,120],"learning":[83,121],"with":[84,195],"optimization":[85],"control.":[86],"This":[87,168,231],"enables":[89,172],"dynamic":[90,173],"adaptation":[91],"primary":[93,158],"parameters":[94,159],"based":[95,160],"on":[96,161],"sample":[97],"features.":[98],"defined":[100],"quantifiable":[102],"metric,":[103],"RD":[104,138,165],"fluctuation":[105,139,166],"values,":[106],"assess":[108],"signal":[109],"characteristics":[110,178],"when":[111],"algorithm":[113],"accurately":[114],"detects":[115],"CNVs.":[116,213],"then":[118],"employed":[119],"techniques":[122],"extract":[123],"features":[124],"panel":[126,180,221],"data,":[128],"select":[129],"initial":[130],"parameter":[131],"values":[132],"for":[133,220,242],"samples,":[134,182],"determine":[136],"optimal":[137],"values.":[140,167],"By":[141],"adopting":[142],"predictive":[145],"(AMPC),":[147],"adapCNV":[148,215],"performs":[149],"optimizations":[150],"within":[151],"rolling":[152],"window.":[153],"It":[154],"dynamically":[155],"adjusts":[156],"error":[162],"feedback":[163],"strategy":[171],"adjustment":[174],"automatically":[175],"match":[176],"significantly":[183],"enhancing":[184],"overall":[185],"quality.":[187],"performance":[189],"was":[193],"validated":[194],"simulated":[196],"data.":[197],"Comparative":[198],"analysis":[199],"demonstrated":[200],"proposed":[203],"method":[204],"outperforms":[205],"baseline":[207],"approach,":[208],"particularly":[209,218],"detecting":[211],"small":[212],"suitable":[219],"sequencing,":[222],"may":[224],"broad":[226],"applications":[227],"clinical":[229],"practice.":[230],"approach":[233],"perspective":[237],"introduces":[238],"new":[240],"paradigm":[241],"detection.":[244]},"counts_by_year":[],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}
