{"id":"https://openalex.org/W4390992308","doi":"https://doi.org/10.1109/bibm58861.2023.10386037","title":"KDProg: A Knowledge distillation graph neural network for cancer prognosis prediction and analysis","display_name":"KDProg: A Knowledge distillation graph neural network for cancer prognosis prediction and analysis","publication_year":2023,"publication_date":"2023-12-05","ids":{"openalex":"https://openalex.org/W4390992308","doi":"https://doi.org/10.1109/bibm58861.2023.10386037"},"language":"en","primary_location":{"id":"doi:10.1109/bibm58861.2023.10386037","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibm58861.2023.10386037","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2023 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5017707130","display_name":"Shuwen Xiong","orcid":"https://orcid.org/0000-0002-0935-9787"},"institutions":[{"id":"https://openalex.org/I24201400","display_name":"Chengdu University of Information Technology","ror":"https://ror.org/01yxwrh59","country_code":"CN","type":"education","lineage":["https://openalex.org/I24201400"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Shuwen Xiong","raw_affiliation_strings":["Chengdu University of Information Technology,School of Computer Science,Chengdu,China","School of Computer Science, Chengdu University of Information Technology, Chengdu, China"],"affiliations":[{"raw_affiliation_string":"Chengdu University of Information Technology,School of Computer Science,Chengdu,China","institution_ids":["https://openalex.org/I24201400"]},{"raw_affiliation_string":"School of Computer Science, Chengdu University of Information Technology, Chengdu, China","institution_ids":["https://openalex.org/I24201400"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100398242","display_name":"Zixuan Wang","orcid":"https://orcid.org/0000-0002-0854-5895"},"institutions":[{"id":"https://openalex.org/I24185976","display_name":"Sichuan University","ror":"https://ror.org/011ashp19","country_code":"CN","type":"education","lineage":["https://openalex.org/I24185976"]},{"id":"https://openalex.org/I24201400","display_name":"Chengdu University of Information Technology","ror":"https://ror.org/01yxwrh59","country_code":"CN","type":"education","lineage":["https://openalex.org/I24201400"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zixuan Wang","raw_affiliation_strings":["Sichuan University,College of Electronics and Information Engineering,Chengdu,China","College of Electronics and Information Engineering, Sichuan University, Chengdu, China"],"affiliations":[{"raw_affiliation_string":"Sichuan University,College of Electronics and Information Engineering,Chengdu,China","institution_ids":["https://openalex.org/I24185976"]},{"raw_affiliation_string":"College of Electronics and Information Engineering, Sichuan University, Chengdu, China","institution_ids":["https://openalex.org/I24201400","https://openalex.org/I24185976"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100628432","display_name":"Junming Zhang","orcid":"https://orcid.org/0000-0002-9603-0081"},"institutions":[{"id":"https://openalex.org/I24201400","display_name":"Chengdu University of Information Technology","ror":"https://ror.org/01yxwrh59","country_code":"CN","type":"education","lineage":["https://openalex.org/I24201400"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Junming Zhang","raw_affiliation_strings":["Chengdu University of Information Technology,School of Computer Science,Chengdu,China","School of Computer Science, Chengdu University of Information Technology, Chengdu, China"],"affiliations":[{"raw_affiliation_string":"Chengdu University of Information Technology,School of Computer Science,Chengdu,China","institution_ids":["https://openalex.org/I24201400"]},{"raw_affiliation_string":"School of Computer Science, Chengdu University of Information Technology, Chengdu, China","institution_ids":["https://openalex.org/I24201400"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5083712796","display_name":"Hong Luo","orcid":"https://orcid.org/0000-0003-2753-7337"},"institutions":[{"id":"https://openalex.org/I24201400","display_name":"Chengdu University of Information Technology","ror":"https://ror.org/01yxwrh59","country_code":"CN","type":"education","lineage":["https://openalex.org/I24201400"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Hong Luo","raw_affiliation_strings":["Chengdu University of Information Technology,School of Computer Science,Chengdu,China","School of Computer Science, Chengdu University of Information Technology, Chengdu, China"],"affiliations":[{"raw_affiliation_string":"Chengdu University of Information Technology,School of Computer Science,Chengdu,China","institution_ids":["https://openalex.org/I24201400"]},{"raw_affiliation_string":"School of Computer Science, Chengdu University of Information Technology, Chengdu, China","institution_ids":["https://openalex.org/I24201400"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100741917","display_name":"Yongqing Zhang","orcid":"https://orcid.org/0000-0003-3422-8305"},"institutions":[{"id":"https://openalex.org/I24201400","display_name":"Chengdu University of Information Technology","ror":"https://ror.org/01yxwrh59","country_code":"CN","type":"education","lineage":["https://openalex.org/I24201400"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yongqing Zhang","raw_affiliation_strings":["Chengdu University of Information Technology,School of Computer Science,Chengdu,China","School of Computer Science, Chengdu University of Information Technology, Chengdu, China"],"affiliations":[{"raw_affiliation_string":"Chengdu University of Information Technology,School of Computer Science,Chengdu,China","institution_ids":["https://openalex.org/I24201400"]},{"raw_affiliation_string":"School of Computer Science, Chengdu University of Information Technology, Chengdu, China","institution_ids":["https://openalex.org/I24201400"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5017426085","display_name":"Quan Zou","orcid":"https://orcid.org/0000-0001-6406-1142"},"institutions":[{"id":"https://openalex.org/I150229711","display_name":"University of Electronic Science and Technology of China","ror":"https://ror.org/04qr3zq92","country_code":"CN","type":"education","lineage":["https://openalex.org/I150229711"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Quan Zou","raw_affiliation_strings":["University of Electronic Science and Technology of China,Institute of Fundamental and Frontier Sciences,Chengdu,China","Institute of Fundamental and Frontier Sciences, University of Electronic Science and Technology of China, Chengdu, China"],"affiliations":[{"raw_affiliation_string":"University of Electronic Science and Technology of China,Institute of Fundamental and Frontier Sciences,Chengdu,China","institution_ids":["https://openalex.org/I150229711"]},{"raw_affiliation_string":"Institute of Fundamental and Frontier Sciences, University of Electronic Science and Technology of China, Chengdu, China","institution_ids":["https://openalex.org/I150229711"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5017707130"],"corresponding_institution_ids":["https://openalex.org/I24201400"],"apc_list":null,"apc_paid":null,"fwci":0.243,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.59781558,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":91,"max":95},"biblio":{"volume":null,"issue":null,"first_page":"1582","last_page":"1587"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12422","display_name":"Radiomics and Machine Learning in Medical Imaging","score":0.992900013923645,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T12422","display_name":"Radiomics and Machine Learning in Medical Imaging","score":0.992900013923645,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10862","display_name":"AI in cancer detection","score":0.9797999858856201,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9768999814987183,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/artificial-neural-network","display_name":"Artificial neural network","score":0.629092812538147},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6151248812675476},{"id":"https://openalex.org/keywords/distillation","display_name":"Distillation","score":0.5914508700370789},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.4408876895904541},{"id":"https://openalex.org/keywords/graph-theory","display_name":"Graph theory","score":0.4352743327617645},{"id":"https://openalex.org/keywords/graph","display_name":"Graph","score":0.4214853048324585},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.37014779448509216},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.21683526039123535},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.15107157826423645},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.09803566336631775}],"concepts":[{"id":"https://openalex.org/C50644808","wikidata":"https://www.wikidata.org/wiki/Q192776","display_name":"Artificial neural network","level":2,"score":0.629092812538147},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6151248812675476},{"id":"https://openalex.org/C204030448","wikidata":"https://www.wikidata.org/wiki/Q101017","display_name":"Distillation","level":2,"score":0.5914508700370789},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.4408876895904541},{"id":"https://openalex.org/C88230418","wikidata":"https://www.wikidata.org/wiki/Q131476","display_name":"Graph theory","level":2,"score":0.4352743327617645},{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.4214853048324585},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.37014779448509216},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.21683526039123535},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.15107157826423645},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.09803566336631775},{"id":"https://openalex.org/C178790620","wikidata":"https://www.wikidata.org/wiki/Q11351","display_name":"Organic chemistry","level":1,"score":0.0},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/bibm58861.2023.10386037","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibm58861.2023.10386037","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2023 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.6100000143051147,"id":"https://metadata.un.org/sdg/16","display_name":"Peace, Justice and strong institutions"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320328111","display_name":"Chengdu University","ror":"https://ror.org/034z67559"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":26,"referenced_works":["https://openalex.org/W1522301498","https://openalex.org/W1821462560","https://openalex.org/W1896436952","https://openalex.org/W2118527670","https://openalex.org/W2157076315","https://openalex.org/W2158485828","https://openalex.org/W2753919178","https://openalex.org/W2765219164","https://openalex.org/W2894573839","https://openalex.org/W2900569176","https://openalex.org/W2969259882","https://openalex.org/W3012736453","https://openalex.org/W3024899322","https://openalex.org/W3085172652","https://openalex.org/W3093866409","https://openalex.org/W3121756359","https://openalex.org/W3163443268","https://openalex.org/W3181637650","https://openalex.org/W4205529838","https://openalex.org/W4210870577","https://openalex.org/W4283662269","https://openalex.org/W4285492263","https://openalex.org/W4294216483","https://openalex.org/W4327569165","https://openalex.org/W4362589322","https://openalex.org/W4366549962"],"related_works":["https://openalex.org/W3026162553","https://openalex.org/W2768175398","https://openalex.org/W2344382886","https://openalex.org/W19111321","https://openalex.org/W2412887479","https://openalex.org/W32245304","https://openalex.org/W2953684491","https://openalex.org/W4285338581","https://openalex.org/W2015158429","https://openalex.org/W2080290893"],"abstract_inverted_index":{"Accurately":[0],"predicting":[1,26,188],"cancer":[2,27,121,189],"prognosis":[3,28],"remains":[4],"challenging,":[5],"owing":[6],"to":[7,48,66,86,117],"the":[8,55,68,88,95,101,105,130,140,160,179,184,195],"combination":[9],"of":[10,75,112,183],"computational":[11],"and":[12,29,61,91,132,148,153,167,181],"practical":[13,120],"challenges.":[14],"This":[15],"study":[16],"proposes":[17],"KDProg,":[18],"a":[19,36,43,49,77,83],"knowledge":[20],"distillation-based":[21],"graph":[22],"learning":[23],"framework":[24,34],"for":[25,129,139,159],"exploring":[30],"downstream":[31],"tasks.":[32],"The":[33,136,156,191],"includes":[35],"novel":[37,84],"feature":[38,59],"distillation":[39,89],"paradigm":[40],"that":[41,194],"compresses":[42],"multi-layer":[44],"complex":[45,116],"teacher":[46,56,131,141],"model":[47,102,142,162,197],"single-layer":[50],"simple":[51],"student":[52,69,133,161],"by":[53],"using":[54],"model\u2019s":[57,70],"middle-layer":[58],"representations":[60],"outputs":[62],"as":[63],"supervision":[64],"information":[65],"improve":[67],"performance.":[71],"In":[72],"addition,":[73],"instead":[74],"introducing":[76],"unified":[78],"temperature":[79,90],"hyperparameter,":[80],"KDProg":[81],"adopts":[82],"strategy":[85],"parameterize":[87],"combine":[92],"it":[93],"with":[94],"Cox":[96],"partial":[97],"log-likelihood":[98],"function.":[99],"So":[100],"can":[103,198],"learn":[104],"appropriate":[106],"temperature.":[107],"Furthermore,":[108],"considering":[109],"multi-omics":[110,144],"data":[111,128,138,145,158],"patients":[113],"are":[114,143,163],"often":[115],"obtain":[118],"in":[119,187],"prognosis,":[122],"this":[123],"paper":[124],"uses":[125],"different":[126],"input":[127,137,157],"models,":[134],"respectively.":[135],"(mRNA,":[146],"CNV,":[147],"DNA":[149],"methylation),":[150],"clinical":[151,165,200],"data,":[152,166],"KEGG":[154,168],"pathways.":[155,169],"mRNA,":[164],"Extensive":[170],"experiments":[171],"on":[172],"15":[173],"real-world":[174],"datasets":[175],"from":[176],"TCGA":[177],"demonstrated":[178],"effectiveness":[180],"efficiency":[182],"proposed":[185,196],"method":[186],"prognosis.":[190],"results":[192],"suggest":[193],"guide":[199],"decision-making.":[201]},"counts_by_year":[{"year":2025,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
