{"id":"https://openalex.org/W4390971216","doi":"https://doi.org/10.1109/bibm58861.2023.10385733","title":"AF Adapter: Continual Pretraining for Building Chinese Biomedical Language Model","display_name":"AF Adapter: Continual Pretraining for Building Chinese Biomedical Language Model","publication_year":2023,"publication_date":"2023-12-05","ids":{"openalex":"https://openalex.org/W4390971216","doi":"https://doi.org/10.1109/bibm58861.2023.10385733"},"language":"en","primary_location":{"id":"doi:10.1109/bibm58861.2023.10385733","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibm58861.2023.10385733","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2023 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5056659276","display_name":"Yongyu Yan","orcid":null},"institutions":[{"id":"https://openalex.org/I143593769","display_name":"East China University of Science and Technology","ror":"https://ror.org/01vyrm377","country_code":"CN","type":"education","lineage":["https://openalex.org/I143593769"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yongyu Yan","raw_affiliation_strings":["East China University of Science and Technology,School of Information Science and Engineering,Shanghai,China","School of Information Science and Engineering, East China University of Science and Technology, Shanghai, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"East China University of Science and Technology,School of Information Science and Engineering,Shanghai,China","institution_ids":["https://openalex.org/I143593769"]},{"raw_affiliation_string":"School of Information Science and Engineering, East China University of Science and Technology, Shanghai, China","institution_ids":["https://openalex.org/I143593769"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5000001964","display_name":"Kui Xue","orcid":null},"institutions":[{"id":"https://openalex.org/I4210100255","display_name":"Beijing Academy of Artificial Intelligence","ror":"https://ror.org/016a74861","country_code":"CN","type":"other","lineage":["https://openalex.org/I4210100255"]},{"id":"https://openalex.org/I4391012619","display_name":"Shanghai Artificial Intelligence Laboratory","ror":"https://ror.org/03wkvpx79","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4391012619"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Kui Xue","raw_affiliation_strings":["Shanghai Artificial Intelligence Laboratory,Shanghai,China","Shanghai Artificial Intelligence Laboratory, Shanghai, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Shanghai Artificial Intelligence Laboratory,Shanghai,China","institution_ids":["https://openalex.org/I4210100255","https://openalex.org/I4391012619"]},{"raw_affiliation_string":"Shanghai Artificial Intelligence Laboratory, Shanghai, China","institution_ids":["https://openalex.org/I4210100255","https://openalex.org/I4391012619"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102824622","display_name":"Xiaoming Shi","orcid":"https://orcid.org/0000-0003-0764-8961"},"institutions":[{"id":"https://openalex.org/I4210100255","display_name":"Beijing Academy of Artificial Intelligence","ror":"https://ror.org/016a74861","country_code":"CN","type":"other","lineage":["https://openalex.org/I4210100255"]},{"id":"https://openalex.org/I4391012619","display_name":"Shanghai Artificial Intelligence Laboratory","ror":"https://ror.org/03wkvpx79","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4391012619"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xiaoming Shi","raw_affiliation_strings":["Shanghai Artificial Intelligence Laboratory,Shanghai,China","Shanghai Artificial Intelligence Laboratory, Shanghai, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Shanghai Artificial Intelligence Laboratory,Shanghai,China","institution_ids":["https://openalex.org/I4210100255","https://openalex.org/I4391012619"]},{"raw_affiliation_string":"Shanghai Artificial Intelligence Laboratory, Shanghai, China","institution_ids":["https://openalex.org/I4210100255","https://openalex.org/I4391012619"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101718939","display_name":"Qi Ye","orcid":"https://orcid.org/0000-0003-2512-1266"},"institutions":[{"id":"https://openalex.org/I143593769","display_name":"East China University of Science and Technology","ror":"https://ror.org/01vyrm377","country_code":"CN","type":"education","lineage":["https://openalex.org/I143593769"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Qi Ye","raw_affiliation_strings":["East China University of Science and Technology,School of Information Science and Engineering,Shanghai,China","School of Information Science and Engineering, East China University of Science and Technology, Shanghai, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"East China University of Science and Technology,School of Information Science and Engineering,Shanghai,China","institution_ids":["https://openalex.org/I143593769"]},{"raw_affiliation_string":"School of Information Science and Engineering, East China University of Science and Technology, Shanghai, China","institution_ids":["https://openalex.org/I143593769"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100746224","display_name":"Jingping Liu","orcid":"https://orcid.org/0000-0002-8671-2302"},"institutions":[{"id":"https://openalex.org/I143593769","display_name":"East China University of Science and Technology","ror":"https://ror.org/01vyrm377","country_code":"CN","type":"education","lineage":["https://openalex.org/I143593769"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jingping Liu","raw_affiliation_strings":["East China University of Science and Technology,School of Information Science and Engineering,Shanghai,China","School of Information Science and Engineering, East China University of Science and Technology, Shanghai, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"East China University of Science and Technology,School of Information Science and Engineering,Shanghai,China","institution_ids":["https://openalex.org/I143593769"]},{"raw_affiliation_string":"School of Information Science and Engineering, East China University of Science and Technology, Shanghai, China","institution_ids":["https://openalex.org/I143593769"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5005820786","display_name":"Tong Ruan","orcid":"https://orcid.org/0000-0002-3546-8338"},"institutions":[{"id":"https://openalex.org/I143593769","display_name":"East China University of Science and Technology","ror":"https://ror.org/01vyrm377","country_code":"CN","type":"education","lineage":["https://openalex.org/I143593769"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Tong Ruan","raw_affiliation_strings":["East China University of Science and Technology,School of Information Science and Engineering,Shanghai,China","School of Information Science and Engineering, East China University of Science and Technology, Shanghai, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"East China University of Science and Technology,School of Information Science and Engineering,Shanghai,China","institution_ids":["https://openalex.org/I143593769"]},{"raw_affiliation_string":"School of Information Science and Engineering, East China University of Science and Technology, Shanghai, China","institution_ids":["https://openalex.org/I143593769"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":2,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"953","last_page":"957"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10181","display_name":"Natural Language Processing Techniques","score":0.9965000152587891,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9884999990463257,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/adapter","display_name":"Adapter (computing)","score":0.8658777475357056},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6410803198814392},{"id":"https://openalex.org/keywords/language-model","display_name":"Language model","score":0.4297705590724945},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.363272488117218},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.3474521338939667},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.10073569416999817}],"concepts":[{"id":"https://openalex.org/C177284502","wikidata":"https://www.wikidata.org/wiki/Q1005390","display_name":"Adapter (computing)","level":2,"score":0.8658777475357056},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6410803198814392},{"id":"https://openalex.org/C137293760","wikidata":"https://www.wikidata.org/wiki/Q3621696","display_name":"Language model","level":2,"score":0.4297705590724945},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.363272488117218},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.3474521338939667},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.10073569416999817}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/bibm58861.2023.10385733","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibm58861.2023.10385733","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2023 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320335777","display_name":"National Key Research and Development Program of China","ror":null}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":25,"referenced_works":["https://openalex.org/W1682403713","https://openalex.org/W2036963181","https://openalex.org/W2896457183","https://openalex.org/W2911489562","https://openalex.org/W2952370363","https://openalex.org/W2963026768","https://openalex.org/W2964067969","https://openalex.org/W2965373594","https://openalex.org/W2975185270","https://openalex.org/W3021636956","https://openalex.org/W3046375318","https://openalex.org/W3102725307","https://openalex.org/W3168867926","https://openalex.org/W3169113923","https://openalex.org/W3169341408","https://openalex.org/W4283774434","https://openalex.org/W4385245566","https://openalex.org/W6677258307","https://openalex.org/W6739901393","https://openalex.org/W6755207826","https://openalex.org/W6759579507","https://openalex.org/W6766673545","https://openalex.org/W6768586863","https://openalex.org/W6796581206","https://openalex.org/W6840004977"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2748952813","https://openalex.org/W2133028525","https://openalex.org/W4229060448","https://openalex.org/W4306381730","https://openalex.org/W2981692913","https://openalex.org/W3044188621","https://openalex.org/W3184035966","https://openalex.org/W3204019825","https://openalex.org/W4321593827"],"abstract_inverted_index":{"Continual":[0],"pretraining":[1,25,50],"is":[2,62,154],"a":[3,8,14,48,65,84],"popular":[4],"way":[5],"of":[6,20,68,116],"building":[7],"domain-specific":[9,85],"pretrained":[10],"language":[11,16,86],"model":[12,87,117],"from":[13,27],"general-domain":[15],"model.":[17],"In":[18,98],"spite":[19],"its":[21],"high":[22],"efficiency,":[23],"continual":[24,49],"suffers":[26],"catastrophic":[28,143],"forgetting,":[29],"which":[30],"may":[31],"harm":[32],"the":[33,41,53,94,142,150],"model\u2019s":[34],"performance":[35,127],"in":[36,43,126],"downstream":[37,104],"tasks.":[38],"To":[39],"alleviate":[40],"issue,":[42],"this":[44],"paper,":[45],"we":[46,82],"propose":[47],"method":[51,140],"for":[52,93,106],"BERT-based":[54],"model,":[55],"named":[56,88],"Attention-FFN":[57],"Adapter.":[58],"Its":[59],"main":[60],"idea":[61],"to":[63,103,131,149],"introduce":[64],"small":[66],"number":[67],"attention":[69],"heads":[70],"and":[71,78],"hidden":[72],"units":[73],"inside":[74],"each":[75],"self-attention":[76],"layer":[77],"feed-forward":[79],"network.":[80],"Furthermore,":[81],"train":[83],"AF":[89,120],"Adapter":[90,121],"based":[91],"RoBERTa":[92],"Chinese":[95],"biomedical":[96],"domain.":[97],"experiments,":[99],"models":[100],"are":[101],"applied":[102],"tasks":[105],"evaluation.":[107],"The":[108],"results":[109,136],"demonstrate":[110],"that":[111,138],"with":[112],"only":[113],"about":[114],"17%":[115],"parameters":[118],"trained,":[119],"achieves":[122],"0.6%,":[123],"2%":[124],"gain":[125],"on":[128],"average,":[129],"compared":[130,148],"strong":[132],"baselines.":[133],"Further":[134],"experimental":[135],"show":[137],"our":[139],"alleviates":[141],"forgetting":[144],"problem":[145],"by":[146],"11%":[147],"fine-tuning":[151],"method.":[152],"Code":[153],"available":[155],"at":[156],"https://github.com/yanyongyu/AF-Adapter.":[157]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":1}],"updated_date":"2026-07-22T07:51:19.307946","created_date":"2024-01-19T00:00:00"}