{"id":"https://openalex.org/W4390992407","doi":"https://doi.org/10.1109/bibm58861.2023.10385289","title":"Using annotation for computerized support for fast skimming of cardiology electronic health record notes","display_name":"Using annotation for computerized support for fast skimming of cardiology electronic health record notes","publication_year":2023,"publication_date":"2023-12-05","ids":{"openalex":"https://openalex.org/W4390992407","doi":"https://doi.org/10.1109/bibm58861.2023.10385289"},"language":"en","primary_location":{"id":"doi:10.1109/bibm58861.2023.10385289","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibm58861.2023.10385289","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2023 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5111135426","display_name":"Mahshad Koohi H. Dehkordi","orcid":"https://orcid.org/0000-0003-3489-0892"},"institutions":[{"id":"https://openalex.org/I118118575","display_name":"New Jersey Institute of Technology","ror":"https://ror.org/05e74xb87","country_code":"US","type":"education","lineage":["https://openalex.org/I118118575"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Mahshad Koohi H. Dehkordi","raw_affiliation_strings":["NJIT,Department of Computer Science,Newark,NJ,USA","Department of Computer Science, NJIT, Newark, NJ, USA"],"affiliations":[{"raw_affiliation_string":"NJIT,Department of Computer Science,Newark,NJ,USA","institution_ids":["https://openalex.org/I118118575"]},{"raw_affiliation_string":"Department of Computer Science, NJIT, Newark, NJ, USA","institution_ids":["https://openalex.org/I118118575"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5033069494","display_name":"Shuxin Zhou","orcid":null},"institutions":[{"id":"https://openalex.org/I118118575","display_name":"New Jersey Institute of Technology","ror":"https://ror.org/05e74xb87","country_code":"US","type":"education","lineage":["https://openalex.org/I118118575"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Shuxin Zhou","raw_affiliation_strings":["NJIT,Department of Computer Science,Newark,NJ,USA","Department of Computer Science, NJIT, Newark, NJ, USA"],"affiliations":[{"raw_affiliation_string":"NJIT,Department of Computer Science,Newark,NJ,USA","institution_ids":["https://openalex.org/I118118575"]},{"raw_affiliation_string":"Department of Computer Science, NJIT, Newark, NJ, USA","institution_ids":["https://openalex.org/I118118575"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5077648725","display_name":"Yehoshua Perl","orcid":"https://orcid.org/0000-0003-1940-9386"},"institutions":[{"id":"https://openalex.org/I118118575","display_name":"New Jersey Institute of Technology","ror":"https://ror.org/05e74xb87","country_code":"US","type":"education","lineage":["https://openalex.org/I118118575"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Yehoshua Perl","raw_affiliation_strings":["NJIT,Department of Computer Science,Newark,NJ,USA","Department of Computer Science, NJIT, Newark, NJ, USA"],"affiliations":[{"raw_affiliation_string":"NJIT,Department of Computer Science,Newark,NJ,USA","institution_ids":["https://openalex.org/I118118575"]},{"raw_affiliation_string":"Department of Computer Science, NJIT, Newark, NJ, USA","institution_ids":["https://openalex.org/I118118575"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070654032","display_name":"James Geller","orcid":"https://orcid.org/0000-0002-9120-525X"},"institutions":[{"id":"https://openalex.org/I118118575","display_name":"New Jersey Institute of Technology","ror":"https://ror.org/05e74xb87","country_code":"US","type":"education","lineage":["https://openalex.org/I118118575"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"James Geller","raw_affiliation_strings":["NJIT,Department of Data Science,Newark,NJ,USA","Department of Data Science, NJIT, Newark, NJ, USA"],"affiliations":[{"raw_affiliation_string":"NJIT,Department of Data Science,Newark,NJ,USA","institution_ids":["https://openalex.org/I118118575"]},{"raw_affiliation_string":"Department of Data Science, NJIT, Newark, NJ, USA","institution_ids":["https://openalex.org/I118118575"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5042867497","display_name":"Andrew J. Einstein","orcid":"https://orcid.org/0000-0003-2583-9278"},"institutions":[{"id":"https://openalex.org/I2799503643","display_name":"Columbia University Irving Medical Center","ror":"https://ror.org/01esghr10","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I2799503643"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Andrew J. Einstein","raw_affiliation_strings":["Irving Medical Center,Cardiology Division,Dept. of Medicine,New York,NY,USA","Dept. of Medicine, Cardiology Division, Irving Medical Center, New York, NY, USA"],"affiliations":[{"raw_affiliation_string":"Irving Medical Center,Cardiology Division,Dept. of Medicine,New York,NY,USA","institution_ids":[]},{"raw_affiliation_string":"Dept. of Medicine, Cardiology Division, Irving Medical Center, New York, NY, USA","institution_ids":["https://openalex.org/I2799503643"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5049544815","display_name":"Gai Elhanan","orcid":"https://orcid.org/0000-0003-1518-5522"},"institutions":[{"id":"https://openalex.org/I60138030","display_name":"Desert Research Institute","ror":"https://ror.org/02vg22c33","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I60138030"]},{"id":"https://openalex.org/I2802417501","display_name":"Renown Health","ror":"https://ror.org/00w205b62","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I2802417501"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Gai Elhanan","raw_affiliation_strings":["Desert Research Institute,Renown Institute for Health Innovation,Reno,NV,USA","Renown Institute for Health Innovation, Desert Research Institute, Reno, NV, USA"],"affiliations":[{"raw_affiliation_string":"Desert Research Institute,Renown Institute for Health Innovation,Reno,NV,USA","institution_ids":["https://openalex.org/I2802417501","https://openalex.org/I60138030"]},{"raw_affiliation_string":"Renown Institute for Health Innovation, Desert Research Institute, Reno, NV, USA","institution_ids":["https://openalex.org/I2802417501","https://openalex.org/I60138030"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5080240865","display_name":"Vipina K. Keloth","orcid":"https://orcid.org/0000-0001-6919-1122"},"institutions":[{"id":"https://openalex.org/I32971472","display_name":"Yale University","ror":"https://ror.org/03v76x132","country_code":"US","type":"education","lineage":["https://openalex.org/I32971472"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Vipina K. Keloth","raw_affiliation_strings":["Yale School of Medicine,Biomedical Informatics and Data Science,New Haven,CT,USA","Biomedical Informatics and Data Science, Yale School of Medicine, New Haven, CT, USA"],"affiliations":[{"raw_affiliation_string":"Yale School of Medicine,Biomedical Informatics and Data Science,New Haven,CT,USA","institution_ids":["https://openalex.org/I32971472"]},{"raw_affiliation_string":"Biomedical Informatics and Data Science, Yale School of Medicine, New Haven, CT, USA","institution_ids":["https://openalex.org/I32971472"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100458789","display_name":"Hao Liu","orcid":"https://orcid.org/0000-0002-1975-1272"},"institutions":[{"id":"https://openalex.org/I166088655","display_name":"Montclair State University","ror":"https://ror.org/01nxc2t48","country_code":"US","type":"education","lineage":["https://openalex.org/I166088655"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Hao Liu","raw_affiliation_strings":["Montclair State University,Department of Computer Science,Montclair,NJ,USA","Department of Computer Science, Montclair State University, Montclair, NJ, USA"],"affiliations":[{"raw_affiliation_string":"Montclair State University,Department of Computer Science,Montclair,NJ,USA","institution_ids":["https://openalex.org/I166088655"]},{"raw_affiliation_string":"Department of Computer Science, Montclair State University, Montclair, NJ, USA","institution_ids":["https://openalex.org/I166088655"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":8,"corresponding_author_ids":["https://openalex.org/A5111135426"],"corresponding_institution_ids":["https://openalex.org/I118118575"],"apc_list":null,"apc_paid":null,"fwci":1.2724,"has_fulltext":false,"cited_by_count":8,"citation_normalized_percentile":{"value":0.80716299,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":97,"max":98},"biblio":{"volume":null,"issue":null,"first_page":"4043","last_page":"4050"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9937999844551086,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.9937999844551086,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/snomed-ct","display_name":"SNOMED CT","score":0.840559720993042},{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.7666218876838684},{"id":"https://openalex.org/keywords/terminology","display_name":"Terminology","score":0.7127926349639893},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.672809898853302},{"id":"https://openalex.org/keywords/health-care","display_name":"Health care","score":0.4705638885498047},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.44287437200546265},{"id":"https://openalex.org/keywords/electronic-health-record","display_name":"Electronic health record","score":0.4354574382305145},{"id":"https://openalex.org/keywords/protected-health-information","display_name":"Protected health information","score":0.41423362493515015},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.384344220161438},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.3449794054031372},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3259803056716919}],"concepts":[{"id":"https://openalex.org/C206497026","wikidata":"https://www.wikidata.org/wiki/Q1753883","display_name":"SNOMED CT","level":3,"score":0.840559720993042},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.7666218876838684},{"id":"https://openalex.org/C547195049","wikidata":"https://www.wikidata.org/wiki/Q1725664","display_name":"Terminology","level":2,"score":0.7127926349639893},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.672809898853302},{"id":"https://openalex.org/C160735492","wikidata":"https://www.wikidata.org/wiki/Q31207","display_name":"Health care","level":2,"score":0.4705638885498047},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.44287437200546265},{"id":"https://openalex.org/C3020144179","wikidata":"https://www.wikidata.org/wiki/Q10871684","display_name":"Electronic health record","level":3,"score":0.4354574382305145},{"id":"https://openalex.org/C133652896","wikidata":"https://www.wikidata.org/wiki/Q7251300","display_name":"Protected health information","level":5,"score":0.41423362493515015},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.384344220161438},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.3449794054031372},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3259803056716919},{"id":"https://openalex.org/C147268084","wikidata":"https://www.wikidata.org/wiki/Q5635796","display_name":"HRHIS","level":4,"score":0.0},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0},{"id":"https://openalex.org/C185618831","wikidata":"https://www.wikidata.org/wiki/Q1851928","display_name":"Health promotion","level":3,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C50522688","wikidata":"https://www.wikidata.org/wiki/Q189833","display_name":"Economic growth","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/bibm58861.2023.10385289","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibm58861.2023.10385289","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2023 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":36,"referenced_works":["https://openalex.org/W7126071","https://openalex.org/W138612281","https://openalex.org/W1034019924","https://openalex.org/W1979945892","https://openalex.org/W2076069439","https://openalex.org/W2102626131","https://openalex.org/W2122402213","https://openalex.org/W2131660156","https://openalex.org/W2146089916","https://openalex.org/W2147221739","https://openalex.org/W2147378544","https://openalex.org/W2159583324","https://openalex.org/W2396881363","https://openalex.org/W2404369708","https://openalex.org/W2579555219","https://openalex.org/W2735952128","https://openalex.org/W2790740913","https://openalex.org/W2807888238","https://openalex.org/W2916455015","https://openalex.org/W2948909602","https://openalex.org/W2963716420","https://openalex.org/W2964000578","https://openalex.org/W2971258845","https://openalex.org/W2989464093","https://openalex.org/W3113519334","https://openalex.org/W4308371481","https://openalex.org/W4318811808","https://openalex.org/W4321786194","https://openalex.org/W4381594492","https://openalex.org/W4382322799","https://openalex.org/W6604181502","https://openalex.org/W6605610795","https://openalex.org/W6632766574","https://openalex.org/W6713634263","https://openalex.org/W6748439432","https://openalex.org/W6854352926"],"related_works":["https://openalex.org/W2039735462","https://openalex.org/W2405923535","https://openalex.org/W1511848092","https://openalex.org/W1708042184","https://openalex.org/W2511597072","https://openalex.org/W2338225670","https://openalex.org/W1972477581","https://openalex.org/W4302340031","https://openalex.org/W2038324110","https://openalex.org/W1588917234"],"abstract_inverted_index":{"Under":[0],"the":[1,77,91,97,116,151,181,184,205,229,232,283,287,303],"circumstances":[2],"prevalent":[3],"in":[4,30,64,115,286],"current":[5],"healthcare,":[6],"medical":[7,58,325],"professionals":[8,70],"such":[9],"as":[10,135,166,239,290],"physicians":[11],"and":[12,67,256],"nurses":[13],"need":[14],"to":[15,44,71,86,111,219,258,301,313],"read":[16,36],"large":[17],"numbers":[18],"of":[19,79,99,101,128,154,172,183,231,244,246,310,317],"Electronic":[20],"Health":[21],"Record":[22],"(EHR)":[23],"notes.":[24,319],"This":[25,293],"demand":[26],"fosters":[27],"a":[28,37,56,264,297],"situation":[29],"which":[31,83,170],"providers":[32],"typically":[33],"do":[34],"not":[35],"whole":[38],"note":[39],"but":[40],"quickly":[41],"skim":[42],"it,":[43],"capture":[45],"its":[46],"essential":[47],"content.":[48],"Consequently,":[49],"by":[50,107,139,160],"fast":[51,73,121,315],"skimming,":[52,74],"one":[53],"may":[54],"miss":[55],"critical":[57,81],"fact.":[59],"Annotation":[60],"highlights":[61],"important":[62,113],"content":[63],"EHR":[65,117,318],"notes,":[66],"enables":[68],"healthcare":[69],"perform":[72],"thereby":[75],"minimizing":[76],"risk":[78],"missing":[80],"information,":[82],"is":[84,136,158,197,228],"detrimental":[85],"patient":[87],"care.":[88],"We":[89,104],"designed":[90],"Cardiology":[92,304],"Interface":[93,305],"Terminology":[94,306],"(CIT)":[95,307],"for":[96,119,187,201,214,274,308,323],"purpose":[98],"annotation":[100,108,245,259,309],"cardiology":[102,152,164,247,311],"EHRs.":[103],"emphasize":[105],"that":[106],"we":[109,208],"refer":[110],"highlighting":[112],"information":[114],"notes":[118],"enabling":[120],"skimming":[122,316],"rather":[123],"than":[124,175],"just":[125],"recognizing":[126],"names":[127],"diseases,":[129],"drugs,":[130],"etc.":[131],"from":[132,163,190,217,280,330],"Reference":[133],"Terminologies":[134],"usually":[137],"done":[138],"existing":[140],"Named":[141],"Entity":[142],"Recognition":[143],"(NER)":[144],"systems.":[145],"The":[146,224,242],"CIT":[147,168,240,250,276,331],"design":[148,302],"starts":[149],"with":[150,249,260,277],"components":[153],"SNOMED":[155,176,261],"CT.":[156,262],"It":[157],"enhanced":[159],"mining":[161,188,215,269],"phrases":[162],"EHRs,":[165,191,218,281],"potential":[167],"concepts,":[169],"are":[171],"higher":[173],"granularity":[174],"concepts.":[177,241],"Machine":[178],"learning":[179],"(ML),":[180],"state":[182],"art":[185],"technique":[186],"concepts":[189,216,279,284],"requires":[192],"training":[193,199,291],"data.":[194,292],"However,":[195],"there":[196],"no":[198],"data":[200],"designing":[202],"CIT.":[203],"In":[204,263],"first":[206,288],"stage,":[207,267],"introduce":[209],"an":[210],"innovative":[211],"semi-automatic":[212],"method":[213,300],"replace":[220],"costly":[221],"manual":[222,226],"mining.":[223],"only":[225],"portion":[227],"review":[230],"automatically":[233],"mined":[234],"phrases,":[235],"before":[236],"their":[237],"insertion":[238],"effectiveness":[243],"EHRs":[248,312],"was":[251],"evaluated":[252],"utilizing":[253,282],"proper":[254],"metrics,":[255],"compared":[257],"future":[265],"second":[266],"ML":[268],"techniques":[270],"will":[271],"be":[272,328],"used":[273],"enhancing":[275],"extra":[278],"added":[285],"stage":[289],"work":[294],"focuses":[295],"on":[296],"novel":[298],"semi-automated":[299],"support":[314],"Similar":[320],"interface":[321],"terminologies":[322],"other":[324],"specialties":[326],"could":[327],"obtained":[329],"using":[332],"Transfer":[333],"Learning.":[334]},"counts_by_year":[{"year":2025,"cited_by_count":4},{"year":2024,"cited_by_count":4}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
