{"id":"https://openalex.org/W4313527252","doi":"https://doi.org/10.1109/bibm55620.2022.9995303","title":"Unsupervised continual learning of single-cell clustering based on novelty detection and memory replay","display_name":"Unsupervised continual learning of single-cell clustering based on novelty detection and memory replay","publication_year":2022,"publication_date":"2022-12-06","ids":{"openalex":"https://openalex.org/W4313527252","doi":"https://doi.org/10.1109/bibm55620.2022.9995303"},"language":"en","primary_location":{"id":"doi:10.1109/bibm55620.2022.9995303","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibm55620.2022.9995303","pdf_url":null,"source":{"id":"https://openalex.org/S4363607730","display_name":"2022 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"conference"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2022 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5074823682","display_name":"Peng Ke","orcid":null},"institutions":[{"id":"https://openalex.org/I191208505","display_name":"Xiamen University","ror":"https://ror.org/00mcjh785","country_code":"CN","type":"education","lineage":["https://openalex.org/I191208505"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Peng Ke","raw_affiliation_strings":["Xiamen University,School of Informatics,Xiamen,China,361005"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Xiamen University,School of Informatics,Xiamen,China,361005","institution_ids":["https://openalex.org/I191208505"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5056047523","display_name":"Shuke Xiang","orcid":null},"institutions":[{"id":"https://openalex.org/I191208505","display_name":"Xiamen University","ror":"https://ror.org/00mcjh785","country_code":"CN","type":"education","lineage":["https://openalex.org/I191208505"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Shuke Xiang","raw_affiliation_strings":["Xiamen University,School of Informatics,Xiamen,China,361005"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Xiamen University,School of Informatics,Xiamen,China,361005","institution_ids":["https://openalex.org/I191208505"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101692291","display_name":"Chenyang Xie","orcid":"https://orcid.org/0000-0001-8350-9053"},"institutions":[{"id":"https://openalex.org/I191208505","display_name":"Xiamen University","ror":"https://ror.org/00mcjh785","country_code":"CN","type":"education","lineage":["https://openalex.org/I191208505"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Chenyang Xie","raw_affiliation_strings":["Xiamen University,School of Informatics,Xiamen,China,361005"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Xiamen University,School of Informatics,Xiamen,China,361005","institution_ids":["https://openalex.org/I191208505"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5031000779","display_name":"Yunhao Zhang","orcid":"https://orcid.org/0009-0009-3182-9296"},"institutions":[{"id":"https://openalex.org/I191208505","display_name":"Xiamen University","ror":"https://ror.org/00mcjh785","country_code":"CN","type":"education","lineage":["https://openalex.org/I191208505"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yunhao Zhang","raw_affiliation_strings":["Xiamen University,School of Informatics,Xiamen,China,361005"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Xiamen University,School of Informatics,Xiamen,China,361005","institution_ids":["https://openalex.org/I191208505"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100427763","display_name":"Zhen He","orcid":"https://orcid.org/0000-0003-0302-5775"},"institutions":[{"id":"https://openalex.org/I142415962","display_name":"Beijing Institute of Education","ror":"https://ror.org/03aefdx31","country_code":"CN","type":"facility","lineage":["https://openalex.org/I142415962"]},{"id":"https://openalex.org/I4391767653","display_name":"Institute of Basic Medical Sciences of the Chinese Academy of Medical Sciences","ror":"https://ror.org/055qbch41","country_code":null,"type":"facility","lineage":["https://openalex.org/I200296433","https://openalex.org/I4391767653"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhen He","raw_affiliation_strings":["Beijing Institute of Basic Medical Sciences,Beijing,China,100850"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Beijing Institute of Basic Medical Sciences,Beijing,China,100850","institution_ids":["https://openalex.org/I142415962","https://openalex.org/I4391767653"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5086078008","display_name":"Zhongnan Zhang","orcid":"https://orcid.org/0000-0002-7227-3943"},"institutions":[{"id":"https://openalex.org/I191208505","display_name":"Xiamen University","ror":"https://ror.org/00mcjh785","country_code":"CN","type":"education","lineage":["https://openalex.org/I191208505"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhongnan Zhang","raw_affiliation_strings":["Xiamen University,School of Informatics,Xiamen,China,361005"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Xiamen University,School of Informatics,Xiamen,China,361005","institution_ids":["https://openalex.org/I191208505"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.2076,"has_fulltext":false,"cited_by_count":2,"citation_normalized_percentile":{"value":0.45544659,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":95,"max":96},"biblio":{"volume":null,"issue":null,"first_page":"3031","last_page":"3038"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11307","display_name":"Domain Adaptation and Few-Shot Learning","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11307","display_name":"Domain Adaptation and Few-Shot Learning","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12676","display_name":"Machine Learning and ELM","score":0.9861999750137329,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":0.9789999723434448,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/unsupervised-learning","display_name":"Unsupervised learning","score":0.8259164690971375},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7985121011734009},{"id":"https://openalex.org/keywords/novelty-detection","display_name":"Novelty detection","score":0.7075825333595276},{"id":"https://openalex.org/keywords/cluster-analysis","display_name":"Cluster analysis","score":0.705914318561554},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.6508151888847351},{"id":"https://openalex.org/keywords/forgetting","display_name":"Forgetting","score":0.6502790451049805},{"id":"https://openalex.org/keywords/novelty","display_name":"Novelty","score":0.64490807056427},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.5328519940376282},{"id":"https://openalex.org/keywords/competitive-learning","display_name":"Competitive learning","score":0.43352705240249634}],"concepts":[{"id":"https://openalex.org/C8038995","wikidata":"https://www.wikidata.org/wiki/Q1152135","display_name":"Unsupervised learning","level":2,"score":0.8259164690971375},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7985121011734009},{"id":"https://openalex.org/C2778924833","wikidata":"https://www.wikidata.org/wiki/Q7064603","display_name":"Novelty detection","level":3,"score":0.7075825333595276},{"id":"https://openalex.org/C73555534","wikidata":"https://www.wikidata.org/wiki/Q622825","display_name":"Cluster analysis","level":2,"score":0.705914318561554},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.6508151888847351},{"id":"https://openalex.org/C7149132","wikidata":"https://www.wikidata.org/wiki/Q1377840","display_name":"Forgetting","level":2,"score":0.6502790451049805},{"id":"https://openalex.org/C2778738651","wikidata":"https://www.wikidata.org/wiki/Q16546687","display_name":"Novelty","level":2,"score":0.64490807056427},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.5328519940376282},{"id":"https://openalex.org/C120822770","wikidata":"https://www.wikidata.org/wiki/Q5156355","display_name":"Competitive learning","level":3,"score":0.43352705240249634},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C27206212","wikidata":"https://www.wikidata.org/wiki/Q34178","display_name":"Theology","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/bibm55620.2022.9995303","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibm55620.2022.9995303","pdf_url":null,"source":{"id":"https://openalex.org/S4363607730","display_name":"2022 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"conference"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2022 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":34,"referenced_works":["https://openalex.org/W1543388142","https://openalex.org/W1821462560","https://openalex.org/W1977556410","https://openalex.org/W1982682305","https://openalex.org/W2001245517","https://openalex.org/W2159345153","https://openalex.org/W2554616628","https://openalex.org/W2734314755","https://openalex.org/W2743151379","https://openalex.org/W2788388592","https://openalex.org/W2902456977","https://openalex.org/W2939422961","https://openalex.org/W2963061824","https://openalex.org/W2963072899","https://openalex.org/W2963588172","https://openalex.org/W2964189064","https://openalex.org/W2965976453","https://openalex.org/W2982593362","https://openalex.org/W3176962406","https://openalex.org/W3189641358","https://openalex.org/W3200728138","https://openalex.org/W4287234591","https://openalex.org/W4292692470","https://openalex.org/W4295883599","https://openalex.org/W4312478260","https://openalex.org/W4319988532","https://openalex.org/W6632547301","https://openalex.org/W6644682428","https://openalex.org/W6729961902","https://openalex.org/W6748375146","https://openalex.org/W6756754374","https://openalex.org/W6767099637","https://openalex.org/W6790405495","https://openalex.org/W6849896277"],"related_works":["https://openalex.org/W2064636555","https://openalex.org/W2585503716","https://openalex.org/W1939982668","https://openalex.org/W2105014086","https://openalex.org/W2076090200","https://openalex.org/W3025682415","https://openalex.org/W2081173909","https://openalex.org/W4389009659","https://openalex.org/W4312933423","https://openalex.org/W2604316291"],"abstract_inverted_index":{"Unsupervised":[0,68],"clustering":[1],"of":[2,23,100],"single-cell":[3,32,64,101,120],"RNA":[4],"sequencing":[5],"(scRNA-seq)":[6],"data":[7],"is":[8,27],"essential":[9],"because":[10],"it":[11,26],"allows":[12],"us":[13],"to":[14,35,43,79,84,95],"identify":[15],"putative":[16],"cell":[17,125],"types.":[18],"With":[19],"the":[20,49],"rapid":[21],"growth":[22],"scRNA-seq":[24,86],"data,":[25],"difficult":[28],"for":[29,63],"traditional":[30],"learning-based":[31],"analysis":[33,121],"methods":[34,118],"efficiently":[36],"and":[37,53,81],"continuously":[38],"deal":[39],"with":[40],"them":[41],"due":[42],"catastrophic":[44],"forgetting.":[45],"Inspired":[46],"by":[47],"how":[48],"human":[50],"brain":[51],"learns":[52],"remembers,":[54],"we":[55,89],"propose":[56],"a":[57,75],"novel":[58],"unsupervised":[59,97],"continual":[60,92,98,116],"learning":[61,93,99,117],"method":[62],"analysis,":[65],"namely":[66],"Continual":[67],"Memory":[69],"Replay":[70],"(CUMR).":[71],"We":[72],"first":[73],"employ":[74],"novelty":[76],"detection":[77],"algorithm":[78],"learn":[80],"assign":[82],"pseudo-labels":[83],"unlabeled":[85],"data.":[87],"Then,":[88],"apply":[90],"memory-replay-based":[91],"networks":[94],"achieve":[96],"analysis.":[102],"Experiments":[103],"on":[104],"real":[105],"datasets":[106],"show":[107],"that":[108],"CUMR":[109],"has":[110],"superior":[111],"performance":[112],"over":[113],"other":[114],"state-of-the-art":[115],"in":[119],"tasks":[122],"such":[123],"as":[124],"typing.":[126]},"counts_by_year":[{"year":2025,"cited_by_count":2}],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}
