{"id":"https://openalex.org/W4313526936","doi":"https://doi.org/10.1109/bibm55620.2022.9995182","title":"Predicting LncRNA-Disease Associations Based on LncRNA-MiRNA-Disease Multilayer Association Network and Bipartite Network Recommendation","display_name":"Predicting LncRNA-Disease Associations Based on LncRNA-MiRNA-Disease Multilayer Association Network and Bipartite Network Recommendation","publication_year":2022,"publication_date":"2022-12-06","ids":{"openalex":"https://openalex.org/W4313526936","doi":"https://doi.org/10.1109/bibm55620.2022.9995182"},"language":"en","primary_location":{"id":"doi:10.1109/bibm55620.2022.9995182","is_oa":false,"landing_page_url":"http://dx.doi.org/10.1109/bibm55620.2022.9995182","pdf_url":null,"source":{"id":"https://openalex.org/S4363607730","display_name":"2022 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"conference"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2022 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5101812009","display_name":"Guozheng Zhang","orcid":"https://orcid.org/0000-0002-1928-5988"},"institutions":[{"id":"https://openalex.org/I202126657","display_name":"Qufu Normal University","ror":"https://ror.org/03ceheh96","country_code":"CN","type":"education","lineage":["https://openalex.org/I202126657"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Guo-Zheng Zhang","raw_affiliation_strings":["Qufu Normal University,School of Computer Science,Rizhao,Shandong","School of Computer Science, Qufu Normal University, Rizhao, Shandong"],"affiliations":[{"raw_affiliation_string":"Qufu Normal University,School of Computer Science,Rizhao,Shandong","institution_ids":["https://openalex.org/I202126657"]},{"raw_affiliation_string":"School of Computer Science, Qufu Normal University, Rizhao, Shandong","institution_ids":["https://openalex.org/I202126657"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5036399045","display_name":"Shuzhen Li","orcid":"https://orcid.org/0000-0003-4439-5406"},"institutions":[{"id":"https://openalex.org/I202126657","display_name":"Qufu Normal University","ror":"https://ror.org/03ceheh96","country_code":"CN","type":"education","lineage":["https://openalex.org/I202126657"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Shu-Zhen Li","raw_affiliation_strings":["Qufu Normal University,School of Computer Science,Rizhao,Shandong","School of Computer Science, Qufu Normal University, Rizhao, Shandong"],"affiliations":[{"raw_affiliation_string":"Qufu Normal University,School of Computer Science,Rizhao,Shandong","institution_ids":["https://openalex.org/I202126657"]},{"raw_affiliation_string":"School of Computer Science, Qufu Normal University, Rizhao, Shandong","institution_ids":["https://openalex.org/I202126657"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5069977469","display_name":"Xu-Ran Dou","orcid":null},"institutions":[{"id":"https://openalex.org/I202126657","display_name":"Qufu Normal University","ror":"https://ror.org/03ceheh96","country_code":"CN","type":"education","lineage":["https://openalex.org/I202126657"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xu-Ran Dou","raw_affiliation_strings":["Qufu Normal University,School of Computer Science,Rizhao,Shandong","School of Computer Science, Qufu Normal University, Rizhao, Shandong"],"affiliations":[{"raw_affiliation_string":"Qufu Normal University,School of Computer Science,Rizhao,Shandong","institution_ids":["https://openalex.org/I202126657"]},{"raw_affiliation_string":"School of Computer Science, Qufu Normal University, Rizhao, Shandong","institution_ids":["https://openalex.org/I202126657"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5007539735","display_name":"Junliang Shang","orcid":"https://orcid.org/0000-0002-8488-2228"},"institutions":[{"id":"https://openalex.org/I202126657","display_name":"Qufu Normal University","ror":"https://ror.org/03ceheh96","country_code":"CN","type":"education","lineage":["https://openalex.org/I202126657"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Junliang Shang","raw_affiliation_strings":["Qufu Normal University,School of Computer Science,Rizhao,Shandong","School of Computer Science, Qufu Normal University, Rizhao, Shandong"],"affiliations":[{"raw_affiliation_string":"Qufu Normal University,School of Computer Science,Rizhao,Shandong","institution_ids":["https://openalex.org/I202126657"]},{"raw_affiliation_string":"School of Computer Science, Qufu Normal University, Rizhao, Shandong","institution_ids":["https://openalex.org/I202126657"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5016869122","display_name":"Qianqian Ren","orcid":"https://orcid.org/0000-0003-0235-2096"},"institutions":[{"id":"https://openalex.org/I202126657","display_name":"Qufu Normal University","ror":"https://ror.org/03ceheh96","country_code":"CN","type":"education","lineage":["https://openalex.org/I202126657"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Qian-Qian Ren","raw_affiliation_strings":["Qufu Normal University,School of Computer Science,Rizhao,Shandong","School of Computer Science, Qufu Normal University, Rizhao, Shandong"],"affiliations":[{"raw_affiliation_string":"Qufu Normal University,School of Computer Science,Rizhao,Shandong","institution_ids":["https://openalex.org/I202126657"]},{"raw_affiliation_string":"School of Computer Science, Qufu Normal University, Rizhao, Shandong","institution_ids":["https://openalex.org/I202126657"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5026569643","display_name":"Ying-Lian Gao","orcid":"https://orcid.org/0000-0003-0483-5622"},"institutions":[{"id":"https://openalex.org/I202126657","display_name":"Qufu Normal University","ror":"https://ror.org/03ceheh96","country_code":"CN","type":"education","lineage":["https://openalex.org/I202126657"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Ying-Lian Gao","raw_affiliation_strings":["Qufu Normal University,School of Computer Science,Rizhao,Shandong","School of Computer Science, Qufu Normal University, Rizhao, Shandong"],"affiliations":[{"raw_affiliation_string":"Qufu Normal University,School of Computer Science,Rizhao,Shandong","institution_ids":["https://openalex.org/I202126657"]},{"raw_affiliation_string":"School of Computer Science, Qufu Normal University, Rizhao, Shandong","institution_ids":["https://openalex.org/I202126657"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5101812009"],"corresponding_institution_ids":["https://openalex.org/I202126657"],"apc_list":null,"apc_paid":null,"fwci":0.7183,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.8019802,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":"24","issue":null,"first_page":"2216","last_page":"2223"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10515","display_name":"Cancer-related molecular mechanisms research","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10515","display_name":"Cancer-related molecular mechanisms research","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11765","display_name":"Circular RNAs in diseases","score":0.9666000008583069,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10062","display_name":"MicroRNA in disease regulation","score":0.9264000058174133,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/disease","display_name":"Disease","score":0.7689387798309326},{"id":"https://openalex.org/keywords/association","display_name":"Association (psychology)","score":0.5986341834068298},{"id":"https://openalex.org/keywords/bipartite-graph","display_name":"Bipartite graph","score":0.5791968107223511},{"id":"https://openalex.org/keywords/microrna","display_name":"microRNA","score":0.5458413362503052},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5354976654052734},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.44910144805908203},{"id":"https://openalex.org/keywords/cancer","display_name":"Cancer","score":0.43803641200065613},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.35789358615875244},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.25191521644592285},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.20368295907974243},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.16436001658439636},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.15178623795509338},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.1460931897163391},{"id":"https://openalex.org/keywords/pathology","display_name":"Pathology","score":0.07787570357322693}],"concepts":[{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.7689387798309326},{"id":"https://openalex.org/C142853389","wikidata":"https://www.wikidata.org/wiki/Q744778","display_name":"Association (psychology)","level":2,"score":0.5986341834068298},{"id":"https://openalex.org/C197657726","wikidata":"https://www.wikidata.org/wiki/Q174733","display_name":"Bipartite graph","level":3,"score":0.5791968107223511},{"id":"https://openalex.org/C145059251","wikidata":"https://www.wikidata.org/wiki/Q310899","display_name":"microRNA","level":3,"score":0.5458413362503052},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5354976654052734},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.44910144805908203},{"id":"https://openalex.org/C121608353","wikidata":"https://www.wikidata.org/wiki/Q12078","display_name":"Cancer","level":2,"score":0.43803641200065613},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.35789358615875244},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.25191521644592285},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.20368295907974243},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.16436001658439636},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.15178623795509338},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.1460931897163391},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.07787570357322693},{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/bibm55620.2022.9995182","is_oa":false,"landing_page_url":"http://dx.doi.org/10.1109/bibm55620.2022.9995182","pdf_url":null,"source":{"id":"https://openalex.org/S4363607730","display_name":"2022 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"conference"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2022 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/9","score":0.5099999904632568,"display_name":"Industry, innovation and infrastructure"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":36,"referenced_works":["https://openalex.org/W1158178075","https://openalex.org/W1966716734","https://openalex.org/W1986706724","https://openalex.org/W1987219048","https://openalex.org/W1999056920","https://openalex.org/W2002185065","https://openalex.org/W2023940858","https://openalex.org/W2073136316","https://openalex.org/W2095544161","https://openalex.org/W2108051165","https://openalex.org/W2113868616","https://openalex.org/W2117977572","https://openalex.org/W2128983843","https://openalex.org/W2152970345","https://openalex.org/W2158135353","https://openalex.org/W2282084472","https://openalex.org/W2531500048","https://openalex.org/W2751592494","https://openalex.org/W2772618228","https://openalex.org/W2801501532","https://openalex.org/W2810992649","https://openalex.org/W2897174088","https://openalex.org/W2897325253","https://openalex.org/W2939351159","https://openalex.org/W2952153265","https://openalex.org/W2998073828","https://openalex.org/W3020929333","https://openalex.org/W3022537867","https://openalex.org/W3026883980","https://openalex.org/W3027226623","https://openalex.org/W3080501980","https://openalex.org/W3084155903","https://openalex.org/W3099929518","https://openalex.org/W3100936564","https://openalex.org/W3129004128","https://openalex.org/W7074060595"],"related_works":["https://openalex.org/W2371352078","https://openalex.org/W2953461625","https://openalex.org/W2077383796","https://openalex.org/W2080136900","https://openalex.org/W2372768926","https://openalex.org/W2999799752","https://openalex.org/W2567825307","https://openalex.org/W2054458431","https://openalex.org/W2057742104","https://openalex.org/W4283692078"],"abstract_inverted_index":{"The":[0,91,122,169],"pathogenesis":[1],"of":[2,21,26,35,94,124,134,171,177,185],"many":[3,9,178],"human":[4],"diseases":[5],"is":[6,76,96,128,173,195],"unclear,":[7],"but":[8],"studies":[10,184],"have":[11,43],"shown":[12],"that":[13,145,176,193],"lncRNAs":[14,63],"are":[15,79,116,151],"deeply":[16],"involved":[17],"in":[18,29,137],"the":[19,24,30,56,132,138,143,146,155],"development":[20],"diseases.":[22,65],"However,":[23],"exploration":[25],"lncRNA-disease":[27,71,100,109,126,148,167],"associations":[28],"laboratory":[31],"requires":[32],"a":[33,48,69,85],"lot":[34],"time":[36],"and":[37,40,46,62,64,113,188,198],"financial":[38],"resources,":[39],"computational-based":[41],"methods":[42,180],"obvious":[44],"advantages":[45],"become":[47],"promising":[49],"research":[50],"direction.":[51],"But":[52],"few":[53],"experiments":[54],"consider":[55],"relationship":[57],"between":[58],"other":[59],"biological":[60],"factors":[61],"In":[66],"this":[67,125],"paper,":[68],"novel":[70],"association":[72,88,101,123,149],"prediction":[73],"method,":[74],"MANBNR,":[75],"proposed.":[77],"MiRNAs":[78],"introduced":[80],"by":[81,130],"MANBNR":[82,95,172,194],"to":[83,97,163],"construct":[84],"lncRNA-miRNA-disease":[86],"multilayer":[87],"network":[89,157],"(MAN).":[90],"main":[92],"innovation":[93],"mine":[98],"potential":[99,166],"information":[102],"based":[103],"on":[104],"miRNA":[105],"information.":[106],"For":[107],"any":[108],"pair,":[110],"lncRNA-associated":[111],"miRNAs":[112,115,135],"disease-associated":[114],"sorted":[117],"into":[118],"two":[119,139],"sets,":[120],"respectively.":[121],"pair":[127],"judged":[129],"comparing":[131],"number":[133],"shared":[136],"sets.":[140],"This":[141],"solves":[142],"problem":[144],"known":[147],"matrices":[150],"too":[152],"sparse.":[153],"Finally,":[154],"bipartite":[156],"recommendation":[158],"(BNR)":[159],"algorithm":[160],"was":[161],"used":[162],"accurately":[164],"predict":[165],"association.":[168],"performance":[170],"better":[174],"than":[175],"advanced":[179],"at":[181],"present.":[182],"Case":[183],"breast":[186],"cancer":[187,190],"lung":[189],"further":[191],"demonstrate":[192],"an":[196],"effective":[197],"reliable":[199],"method":[200],"for":[201],"LDAs":[202],"prediction.":[203]},"counts_by_year":[{"year":2023,"cited_by_count":1}],"updated_date":"2025-12-21T01:58:51.020947","created_date":"2025-10-10T00:00:00"}
