{"id":"https://openalex.org/W4313525393","doi":"https://doi.org/10.1109/bibm55620.2022.9995053","title":"Predicting human microbe-disease associations based on multi-source heterogeneous graph representation learning model","display_name":"Predicting human microbe-disease associations based on multi-source heterogeneous graph representation learning model","publication_year":2022,"publication_date":"2022-12-06","ids":{"openalex":"https://openalex.org/W4313525393","doi":"https://doi.org/10.1109/bibm55620.2022.9995053"},"language":"en","primary_location":{"id":"doi:10.1109/bibm55620.2022.9995053","is_oa":false,"landing_page_url":"http://dx.doi.org/10.1109/bibm55620.2022.9995053","pdf_url":null,"source":{"id":"https://openalex.org/S4363607730","display_name":"2022 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"conference"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2022 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100769723","display_name":"Haodong Wang","orcid":"https://orcid.org/0009-0004-7034-8499"},"institutions":[{"id":"https://openalex.org/I40963666","display_name":"Central China Normal University","ror":"https://ror.org/03x1jna21","country_code":"CN","type":"education","lineage":["https://openalex.org/I40963666"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Haodong Wang","raw_affiliation_strings":["Central China Normal University,Hubei Provincial Key Laboratory of Artificial Intelligence and Smart Learning,WuHan,Hubei,PR China,430079","National Language Resources Monitoring & Research Center for Network Media, Central China Normal University, WuHan, Hubei, PR China","School of Computer, Central China Normal University, WuHan, Hubei, PR China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Central China Normal University,Hubei Provincial Key Laboratory of Artificial Intelligence and Smart Learning,WuHan,Hubei,PR China,430079","institution_ids":["https://openalex.org/I40963666"]},{"raw_affiliation_string":"National Language Resources Monitoring & Research Center for Network Media, Central China Normal University, WuHan, Hubei, PR China","institution_ids":["https://openalex.org/I40963666"]},{"raw_affiliation_string":"School of Computer, Central China Normal University, WuHan, Hubei, PR China","institution_ids":["https://openalex.org/I40963666"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5045344688","display_name":"Han Sun","orcid":"https://orcid.org/0000-0003-0986-959X"},"institutions":[{"id":"https://openalex.org/I40963666","display_name":"Central China Normal University","ror":"https://ror.org/03x1jna21","country_code":"CN","type":"education","lineage":["https://openalex.org/I40963666"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Han Sun","raw_affiliation_strings":["Central China Normal University,Hubei Provincial Key Laboratory of Artificial Intelligence and Smart Learning,WuHan,Hubei,PR China,430079","School of Mathematics and Statistics, Central China Normal University, WuHan, Hubei, PR China","National Language Resources Monitoring & Research Center for Network Media, Central China Normal University, WuHan, Hubei, PR China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Central China Normal University,Hubei Provincial Key Laboratory of Artificial Intelligence and Smart Learning,WuHan,Hubei,PR China,430079","institution_ids":["https://openalex.org/I40963666"]},{"raw_affiliation_string":"School of Mathematics and Statistics, Central China Normal University, WuHan, Hubei, PR China","institution_ids":["https://openalex.org/I40963666"]},{"raw_affiliation_string":"National Language Resources Monitoring & Research Center for Network Media, Central China Normal University, WuHan, Hubei, PR China","institution_ids":["https://openalex.org/I40963666"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5113984499","display_name":"Yue Wang","orcid":"https://orcid.org/0000-0002-5110-2520"},"institutions":[{"id":"https://openalex.org/I40963666","display_name":"Central China Normal University","ror":"https://ror.org/03x1jna21","country_code":"CN","type":"education","lineage":["https://openalex.org/I40963666"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yue Wang","raw_affiliation_strings":["Central China Normal University,Hubei Provincial Key Laboratory of Artificial Intelligence and Smart Learning,WuHan,Hubei,PR China,430079","National Language Resources Monitoring & Research Center for Network Media, Central China Normal University, WuHan, Hubei, PR China","School of Computer, Central China Normal University, WuHan, Hubei, PR China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Central China Normal University,Hubei Provincial Key Laboratory of Artificial Intelligence and Smart Learning,WuHan,Hubei,PR China,430079","institution_ids":["https://openalex.org/I40963666"]},{"raw_affiliation_string":"National Language Resources Monitoring & Research Center for Network Media, Central China Normal University, WuHan, Hubei, PR China","institution_ids":["https://openalex.org/I40963666"]},{"raw_affiliation_string":"School of Computer, Central China Normal University, WuHan, Hubei, PR China","institution_ids":["https://openalex.org/I40963666"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5079405950","display_name":"Weizhong Zhao","orcid":"https://orcid.org/0000-0001-8552-6084"},"institutions":[{"id":"https://openalex.org/I40963666","display_name":"Central China Normal University","ror":"https://ror.org/03x1jna21","country_code":"CN","type":"education","lineage":["https://openalex.org/I40963666"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Weizhong Zhao","raw_affiliation_strings":["Central China Normal University,Hubei Provincial Key Laboratory of Artificial Intelligence and Smart Learning,WuHan,Hubei,PR China,430079","School of Computer, Central China Normal University, WuHan, Hubei, PR China","National Language Resources Monitoring & Research Center for Network Media, Central China Normal University, WuHan, Hubei, PR China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Central China Normal University,Hubei Provincial Key Laboratory of Artificial Intelligence and Smart Learning,WuHan,Hubei,PR China,430079","institution_ids":["https://openalex.org/I40963666"]},{"raw_affiliation_string":"School of Computer, Central China Normal University, WuHan, Hubei, PR China","institution_ids":["https://openalex.org/I40963666"]},{"raw_affiliation_string":"National Language Resources Monitoring & Research Center for Network Media, Central China Normal University, WuHan, Hubei, PR China","institution_ids":["https://openalex.org/I40963666"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5003550654","display_name":"Xingpeng Jiang","orcid":"https://orcid.org/0000-0002-8848-9300"},"institutions":[{"id":"https://openalex.org/I40963666","display_name":"Central China Normal University","ror":"https://ror.org/03x1jna21","country_code":"CN","type":"education","lineage":["https://openalex.org/I40963666"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xingpeng Jiang","raw_affiliation_strings":["Central China Normal University,Hubei Provincial Key Laboratory of Artificial Intelligence and Smart Learning,WuHan,Hubei,PR China,430079","National Language Resources Monitoring & Research Center for Network Media, Central China Normal University, WuHan, Hubei, PR China","School of Computer, Central China Normal University, WuHan, Hubei, PR China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Central China Normal University,Hubei Provincial Key Laboratory of Artificial Intelligence and Smart Learning,WuHan,Hubei,PR China,430079","institution_ids":["https://openalex.org/I40963666"]},{"raw_affiliation_string":"National Language Resources Monitoring & Research Center for Network Media, Central China Normal University, WuHan, Hubei, PR China","institution_ids":["https://openalex.org/I40963666"]},{"raw_affiliation_string":"School of Computer, Central China Normal University, WuHan, Hubei, PR China","institution_ids":["https://openalex.org/I40963666"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5101496385","display_name":"Xianjun Shen","orcid":"https://orcid.org/0000-0001-5714-8848"},"institutions":[{"id":"https://openalex.org/I40963666","display_name":"Central China Normal University","ror":"https://ror.org/03x1jna21","country_code":"CN","type":"education","lineage":["https://openalex.org/I40963666"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xianjun Shen","raw_affiliation_strings":["Central China Normal University,Hubei Provincial Key Laboratory of Artificial Intelligence and Smart Learning,WuHan,Hubei,PR China,430079","National Language Resources Monitoring & Research Center for Network Media, Central China Normal University, WuHan, Hubei, PR China","School of Computer, Central China Normal University, WuHan, Hubei, PR China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Central China Normal University,Hubei Provincial Key Laboratory of Artificial Intelligence and Smart Learning,WuHan,Hubei,PR China,430079","institution_ids":["https://openalex.org/I40963666"]},{"raw_affiliation_string":"National Language Resources Monitoring & Research Center for Network Media, Central China Normal University, WuHan, Hubei, PR China","institution_ids":["https://openalex.org/I40963666"]},{"raw_affiliation_string":"School of Computer, Central China Normal University, WuHan, Hubei, PR China","institution_ids":["https://openalex.org/I40963666"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I40963666"],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"840","last_page":"843"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10066","display_name":"Gut microbiota and health","score":0.998199999332428,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10066","display_name":"Gut microbiota and health","score":0.998199999332428,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9904999732971191,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10257","display_name":"Oral microbiology and periodontitis research","score":0.9812999963760376,"subfield":{"id":"https://openalex.org/subfields/3506","display_name":"Periodontics"},"field":{"id":"https://openalex.org/fields/35","display_name":"Dentistry"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6673774123191833},{"id":"https://openalex.org/keywords/representation","display_name":"Representation (politics)","score":0.5516701936721802},{"id":"https://openalex.org/keywords/disease","display_name":"Disease","score":0.5357325077056885},{"id":"https://openalex.org/keywords/graph","display_name":"Graph","score":0.4860156178474426},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.4856904447078705},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.45945459604263306},{"id":"https://openalex.org/keywords/field","display_name":"Field (mathematics)","score":0.43310999870300293},{"id":"https://openalex.org/keywords/human-disease","display_name":"Human disease","score":0.4329257309436798},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.15587738156318665},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.1354781687259674},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.12423813343048096}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6673774123191833},{"id":"https://openalex.org/C2776359362","wikidata":"https://www.wikidata.org/wiki/Q2145286","display_name":"Representation (politics)","level":3,"score":0.5516701936721802},{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.5357325077056885},{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.4860156178474426},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.4856904447078705},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.45945459604263306},{"id":"https://openalex.org/C9652623","wikidata":"https://www.wikidata.org/wiki/Q190109","display_name":"Field (mathematics)","level":2,"score":0.43310999870300293},{"id":"https://openalex.org/C2988867146","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Human disease","level":3,"score":0.4329257309436798},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.15587738156318665},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.1354781687259674},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.12423813343048096},{"id":"https://openalex.org/C94625758","wikidata":"https://www.wikidata.org/wiki/Q7163","display_name":"Politics","level":2,"score":0.0},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0},{"id":"https://openalex.org/C202444582","wikidata":"https://www.wikidata.org/wiki/Q837863","display_name":"Pure mathematics","level":1,"score":0.0},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/bibm55620.2022.9995053","is_oa":false,"landing_page_url":"http://dx.doi.org/10.1109/bibm55620.2022.9995053","pdf_url":null,"source":{"id":"https://openalex.org/S4363607730","display_name":"2022 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"conference"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2022 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320337504","display_name":"Research and Development","ror":"https://ror.org/027s68j25"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":21,"referenced_works":["https://openalex.org/W2050591900","https://openalex.org/W2097875133","https://openalex.org/W2106029302","https://openalex.org/W2145336165","https://openalex.org/W2153280946","https://openalex.org/W2322763599","https://openalex.org/W2567465856","https://openalex.org/W2583889943","https://openalex.org/W2739664659","https://openalex.org/W2752131265","https://openalex.org/W2807176368","https://openalex.org/W2899728356","https://openalex.org/W2922817064","https://openalex.org/W2960235084","https://openalex.org/W2964321699","https://openalex.org/W3000082418","https://openalex.org/W3045879648","https://openalex.org/W3097354806","https://openalex.org/W4206826315","https://openalex.org/W4223957045","https://openalex.org/W6720006811"],"related_works":["https://openalex.org/W2062195135","https://openalex.org/W2795079307","https://openalex.org/W2961085424","https://openalex.org/W2793058541","https://openalex.org/W2938786841","https://openalex.org/W1983629434","https://openalex.org/W2055929693","https://openalex.org/W4224009465","https://openalex.org/W4324271173","https://openalex.org/W1967645776"],"abstract_inverted_index":{"Microbes":[0],"are":[1],"closely":[2],"related":[3],"to":[4,53],"human":[5],"diseases,":[6],"and":[7,16,27,124],"the":[8,23,55,64,73,86,94,105,116,119],"internal":[9],"interactions":[10],"among":[11],"microbes":[12,26,123],"influence":[13],"disease":[14],"production":[15],"development":[17],"as":[18],"well.":[19],"Therefore,":[20],"accurately":[21],"predicting":[22],"associations":[24,70,121],"between":[25,122],"diseases":[28,125],"becomes":[29],"very":[30],"important.":[31],"This":[32],"field":[33],"is":[34],"being":[35],"carried":[36],"out":[37],"by":[38],"a":[39,81,108],"large":[40],"number":[41],"of":[42,58,67,89,107,118],"researchers.":[43],"However,":[44],"existing":[45],"methods":[46],"have":[47],"two":[48],"deficiencies:":[49],"(i)":[50],"they":[51,62],"fail":[52],"utilize":[54],"pathogenic":[56],"impact":[57],"microbial":[59],"interactions;":[60],"(ii)":[61],"ignore":[63],"noise":[65],"effect":[66],"unknown":[68],"microbe-disease":[69],"for":[71,84],"training":[72],"prediction":[74],"model.":[75,129],"In":[76,103],"this":[77],"paper,":[78],"we":[79],"propose":[80],"novel":[82],"model":[83,96],"above":[85],"shortcomings.":[87],"Results":[88],"extensive":[90],"experiments":[91],"show":[92],"that":[93],"proposed":[95],"achieves":[97],"better":[98],"performance":[99],"over":[100],"SOTA":[101],"methods.":[102],"addition,":[104],"results":[106],"case":[109],"study":[110],"on":[111],"Type":[112],"1":[113],"diabetes":[114],"demonstrate":[115],"effectiveness":[117],"predicted":[120],"derived":[126],"from":[127],"our":[128]},"counts_by_year":[],"updated_date":"2026-07-14T23:27:15.235271","created_date":"2025-10-10T00:00:00"}
