{"id":"https://openalex.org/W4313527534","doi":"https://doi.org/10.1109/bibm55620.2022.9994850","title":"Identification of personalized driver genes for individuals using graph convolution network","display_name":"Identification of personalized driver genes for individuals using graph convolution network","publication_year":2022,"publication_date":"2022-12-06","ids":{"openalex":"https://openalex.org/W4313527534","doi":"https://doi.org/10.1109/bibm55620.2022.9994850"},"language":"en","primary_location":{"id":"doi:10.1109/bibm55620.2022.9994850","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibm55620.2022.9994850","pdf_url":null,"source":{"id":"https://openalex.org/S4363607730","display_name":"2022 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"conference"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2022 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5053073532","display_name":"Wei Peng","orcid":"https://orcid.org/0000-0002-9572-951X"},"institutions":[{"id":"https://openalex.org/I10660446","display_name":"Kunming University of Science and Technology","ror":"https://ror.org/00xyeez13","country_code":"CN","type":"education","lineage":["https://openalex.org/I10660446"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Wei Peng","raw_affiliation_strings":["Kunming University of Science and Technology, Computer Technology Application Key Lab of Yunnan Province, Kunming University of Science and Technology,Faculty of Information Engineering and Automation,Kunming,China","Faculty of Information Engineering and Automation, Kunming University of Science and Technology, Computer Technology Application Key Lab of Yunnan Province, Kunming University of Science and Technology, Kunming, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Kunming University of Science and Technology, Computer Technology Application Key Lab of Yunnan Province, Kunming University of Science and Technology,Faculty of Information Engineering and Automation,Kunming,China","institution_ids":["https://openalex.org/I10660446"]},{"raw_affiliation_string":"Faculty of Information Engineering and Automation, Kunming University of Science and Technology, Computer Technology Application Key Lab of Yunnan Province, Kunming University of Science and Technology, Kunming, China","institution_ids":["https://openalex.org/I10660446"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5040877393","display_name":"Piaofang Yu","orcid":null},"institutions":[{"id":"https://openalex.org/I10660446","display_name":"Kunming University of Science and Technology","ror":"https://ror.org/00xyeez13","country_code":"CN","type":"education","lineage":["https://openalex.org/I10660446"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Piaofang Yu","raw_affiliation_strings":["Kunming University of Science and Technology,Faculty of Information Engineering and Automation,Kunming,China","Faculty of Information Engineering and Automation, Kunming University of Science and Technology, Kunming, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Kunming University of Science and Technology,Faculty of Information Engineering and Automation,Kunming,China","institution_ids":["https://openalex.org/I10660446"]},{"raw_affiliation_string":"Faculty of Information Engineering and Automation, Kunming University of Science and Technology, Kunming, China","institution_ids":["https://openalex.org/I10660446"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100752235","display_name":"Wei Dai","orcid":"https://orcid.org/0000-0002-3093-6454"},"institutions":[{"id":"https://openalex.org/I10660446","display_name":"Kunming University of Science and Technology","ror":"https://ror.org/00xyeez13","country_code":"CN","type":"education","lineage":["https://openalex.org/I10660446"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Wei Dai","raw_affiliation_strings":["Kunming University of Science and Technology,Faculty of Information Engineering and Automation,Kunming,China","Faculty of Information Engineering and Automation, Kunming University of Science and Technology, Kunming, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Kunming University of Science and Technology,Faculty of Information Engineering and Automation,Kunming,China","institution_ids":["https://openalex.org/I10660446"]},{"raw_affiliation_string":"Faculty of Information Engineering and Automation, Kunming University of Science and Technology, Kunming, China","institution_ids":["https://openalex.org/I10660446"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102760647","display_name":"Xiaodong Fu","orcid":"https://orcid.org/0000-0002-1354-2293"},"institutions":[{"id":"https://openalex.org/I10660446","display_name":"Kunming University of Science and Technology","ror":"https://ror.org/00xyeez13","country_code":"CN","type":"education","lineage":["https://openalex.org/I10660446"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xiaodong Fu","raw_affiliation_strings":["Kunming University of Science and Technology,Faculty of Information Engineering and Automation,Kunming,China","Faculty of Information Engineering and Automation, Kunming University of Science and Technology, Kunming, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Kunming University of Science and Technology,Faculty of Information Engineering and Automation,Kunming,China","institution_ids":["https://openalex.org/I10660446"]},{"raw_affiliation_string":"Faculty of Information Engineering and Automation, Kunming University of Science and Technology, Kunming, China","institution_ids":["https://openalex.org/I10660446"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100418924","display_name":"Li Liu","orcid":"https://orcid.org/0000-0003-4002-7497"},"institutions":[{"id":"https://openalex.org/I10660446","display_name":"Kunming University of Science and Technology","ror":"https://ror.org/00xyeez13","country_code":"CN","type":"education","lineage":["https://openalex.org/I10660446"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Li Liu","raw_affiliation_strings":["Kunming University of Science and Technology,Faculty of Information Engineering and Automation,Kunming,China","Faculty of Information Engineering and Automation, Kunming University of Science and Technology, Kunming, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Kunming University of Science and Technology,Faculty of Information Engineering and Automation,Kunming,China","institution_ids":["https://openalex.org/I10660446"]},{"raw_affiliation_string":"Faculty of Information Engineering and Automation, Kunming University of Science and Technology, Kunming, China","institution_ids":["https://openalex.org/I10660446"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5060816611","display_name":"Yi Pan","orcid":"https://orcid.org/0000-0001-7724-6322"},"institutions":[{"id":"https://openalex.org/I19820366","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35","country_code":"CN","type":"government","lineage":["https://openalex.org/I19820366"]},{"id":"https://openalex.org/I4210145761","display_name":"Shenzhen Institutes of Advanced Technology","ror":"https://ror.org/04gh4er46","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210145761"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yi Pan","raw_affiliation_strings":["Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences,Shenzhen,China,518055"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences,Shenzhen,China,518055","institution_ids":["https://openalex.org/I19820366","https://openalex.org/I4210145761"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"523","last_page":"528"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11287","display_name":"Cancer Genomics and Diagnostics","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11287","display_name":"Cancer Genomics and Diagnostics","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9988999962806702,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9965999722480774,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6236777305603027},{"id":"https://openalex.org/keywords/graph","display_name":"Graph","score":0.6193617582321167},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.5419697165489197},{"id":"https://openalex.org/keywords/convolution","display_name":"Convolution (computer science)","score":0.45105305314064026},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3859151303768158},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.2778756320476532},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.17732790112495422},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.15998050570487976},{"id":"https://openalex.org/keywords/artificial-neural-network","display_name":"Artificial neural network","score":0.10152396559715271}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6236777305603027},{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.6193617582321167},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.5419697165489197},{"id":"https://openalex.org/C45347329","wikidata":"https://www.wikidata.org/wiki/Q5166604","display_name":"Convolution (computer science)","level":3,"score":0.45105305314064026},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3859151303768158},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.2778756320476532},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.17732790112495422},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.15998050570487976},{"id":"https://openalex.org/C50644808","wikidata":"https://www.wikidata.org/wiki/Q192776","display_name":"Artificial neural network","level":2,"score":0.10152396559715271},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/bibm55620.2022.9994850","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibm55620.2022.9994850","pdf_url":null,"source":{"id":"https://openalex.org/S4363607730","display_name":"2022 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"conference"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2022 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320323193","display_name":"Natural Science Foundation of Yunnan Province","ror":"https://ror.org/01h0zpd94"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":30,"referenced_works":["https://openalex.org/W1854214752","https://openalex.org/W1880949099","https://openalex.org/W2009720434","https://openalex.org/W2017138237","https://openalex.org/W2044433401","https://openalex.org/W2088891952","https://openalex.org/W2102140136","https://openalex.org/W2107782176","https://openalex.org/W2118526609","https://openalex.org/W2139227366","https://openalex.org/W2146266967","https://openalex.org/W2149082178","https://openalex.org/W2152061559","https://openalex.org/W2152176732","https://openalex.org/W2158485828","https://openalex.org/W2159987716","https://openalex.org/W2168303063","https://openalex.org/W2784142616","https://openalex.org/W2790295707","https://openalex.org/W2904158025","https://openalex.org/W2949066452","https://openalex.org/W2983296017","https://openalex.org/W2998468179","https://openalex.org/W3047083370","https://openalex.org/W3176772489","https://openalex.org/W3192677404","https://openalex.org/W3206417123","https://openalex.org/W4280590223","https://openalex.org/W4283785215","https://openalex.org/W6639055396"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2748952813","https://openalex.org/W2390279801","https://openalex.org/W2358668433","https://openalex.org/W4396701345","https://openalex.org/W2376932109","https://openalex.org/W2001405890","https://openalex.org/W4396696052","https://openalex.org/W4402327032","https://openalex.org/W2382290278"],"abstract_inverted_index":{"The":[0,179],"correct":[1],"identification":[2],"of":[3,18,40,47,91,115,138,173],"the":[4,16,45,52,111,136,146,151,176],"driver":[5,33,74,89,113,171],"genes":[6,34,75,90,114,131,155,172],"that":[7,183],"lead":[8],"to":[9,23,44,70,85,110,126,149,168],"cancer":[10,19,32,73,88],"development":[11],"is":[12],"essential":[13],"for":[14,30,130],"understanding":[15],"mechanisms":[17],"and":[20,60,132,140,156,194],"developing":[21],"drugs":[22],"treat":[24],"it.":[25],"Currently,":[26],"most":[27],"computational":[28],"methods":[29,69,188],"identifying":[31],"are":[35],"based":[36,95],"on":[37,96,175],"a":[38,82,92,104,159],"cohort":[39],"patients.":[41],"However,":[42],"due":[43],"heterogeneity":[46],"cancers,":[48],"patients":[49],"diagnosed":[50],"with":[51],"same":[53],"cancers":[54],"may":[55],"have":[56],"different":[57],"genomic":[58],"characteristics":[59],"present":[61],"varied":[62],"clinical":[63],"symptoms.":[64],"It":[65],"requires":[66],"devising":[67],"effective":[68],"identify":[71,169],"personalized":[72,87,170],"in":[76],"an":[77],"individual.":[78],"This":[79],"work":[80],"developed":[81],"novel":[83],"method":[84],"predict":[86],"single":[93],"sample":[94],"graph":[97,122],"convolution":[98,123],"networks,":[99],"namely":[100],"pDriverGCN.":[101],"pDriverGCN":[102,144],"constructed":[103],"mutant":[105],"gene-sample":[106],"heterogeneous":[107],"network":[108,124],"according":[109],"known":[112],"samples.":[116],"Then":[117],"it":[118],"employed":[119],"two":[120],"separate":[121],"models":[125],"learn":[127],"feature":[128,147],"representations":[129,148],"samples":[133,157,174],"by":[134],"gathering":[135],"features":[137],"themselves":[139],"their":[141],"neighbors.":[142],"Finally,":[143],"used":[145],"reconstruct":[150],"association":[152],"matrix":[153],"between":[154],"through":[158],"linear":[160],"correlation":[161],"coefficient":[162],"decoder.":[163],"We":[164],"apply":[165],"our":[166,184],"model":[167,185],"TCGA":[177],"datasets.":[178],"experimental":[180],"results":[181],"show":[182],"outperforms":[186],"state-of-the-art":[187],"being":[189],"evaluated":[190],"at":[191],"both":[192],"population":[193],"individual":[195],"levels.":[196]},"counts_by_year":[{"year":2023,"cited_by_count":1}],"updated_date":"2026-07-22T07:51:19.307946","created_date":"2025-10-10T00:00:00"}
