{"id":"https://openalex.org/W4206684716","doi":"https://doi.org/10.1109/bibm52615.2021.9669851","title":"A Comparison of Concept Embeddings for German Clinical Corpora","display_name":"A Comparison of Concept Embeddings for German Clinical Corpora","publication_year":2021,"publication_date":"2021-12-09","ids":{"openalex":"https://openalex.org/W4206684716","doi":"https://doi.org/10.1109/bibm52615.2021.9669851"},"language":"en","primary_location":{"id":"doi:10.1109/bibm52615.2021.9669851","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibm52615.2021.9669851","pdf_url":null,"source":{"id":"https://openalex.org/S4363607735","display_name":"2021 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"conference"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2021 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5029010497","display_name":"Aadil Rasheed","orcid":"https://orcid.org/0009-0005-1083-3043"},"institutions":[{"id":"https://openalex.org/I143288331","display_name":"Hasso Plattner Institute","ror":"https://ror.org/058rn5r42","country_code":"DE","type":"facility","lineage":["https://openalex.org/I143288331","https://openalex.org/I176453806"]},{"id":"https://openalex.org/I176453806","display_name":"University of Potsdam","ror":"https://ror.org/03bnmw459","country_code":"DE","type":"education","lineage":["https://openalex.org/I176453806"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Aadil Rasheed","raw_affiliation_strings":["Digital Health Center, Hasso Plattner Institute, University of Potsdam, Prof.-Dr.-Helmert-Str. 2-3, Potsdam, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Digital Health Center, Hasso Plattner Institute, University of Potsdam, Prof.-Dr.-Helmert-Str. 2-3, Potsdam, Germany","institution_ids":["https://openalex.org/I143288331","https://openalex.org/I176453806"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006643663","display_name":"Florian Borchert","orcid":"https://orcid.org/0000-0003-1079-6500"},"institutions":[{"id":"https://openalex.org/I143288331","display_name":"Hasso Plattner Institute","ror":"https://ror.org/058rn5r42","country_code":"DE","type":"facility","lineage":["https://openalex.org/I143288331","https://openalex.org/I176453806"]},{"id":"https://openalex.org/I176453806","display_name":"University of Potsdam","ror":"https://ror.org/03bnmw459","country_code":"DE","type":"education","lineage":["https://openalex.org/I176453806"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Florian Borchert","raw_affiliation_strings":["Digital Health Center, Hasso Plattner Institute, University of Potsdam, Prof.-Dr.-Helmert-Str. 2-3, Potsdam, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Digital Health Center, Hasso Plattner Institute, University of Potsdam, Prof.-Dr.-Helmert-Str. 2-3, Potsdam, Germany","institution_ids":["https://openalex.org/I143288331","https://openalex.org/I176453806"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5036086819","display_name":"Lasse Kohlmeyer","orcid":null},"institutions":[{"id":"https://openalex.org/I143288331","display_name":"Hasso Plattner Institute","ror":"https://ror.org/058rn5r42","country_code":"DE","type":"facility","lineage":["https://openalex.org/I143288331","https://openalex.org/I176453806"]},{"id":"https://openalex.org/I176453806","display_name":"University of Potsdam","ror":"https://ror.org/03bnmw459","country_code":"DE","type":"education","lineage":["https://openalex.org/I176453806"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Lasse Kohlmeyer","raw_affiliation_strings":["Digital Health Center, Hasso Plattner Institute, University of Potsdam, Prof.-Dr.-Helmert-Str. 2-3, Potsdam, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Digital Health Center, Hasso Plattner Institute, University of Potsdam, Prof.-Dr.-Helmert-Str. 2-3, Potsdam, Germany","institution_ids":["https://openalex.org/I143288331","https://openalex.org/I176453806"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076083936","display_name":"Richard Henkenjohann","orcid":"https://orcid.org/0000-0001-9762-7288"},"institutions":[{"id":"https://openalex.org/I143288331","display_name":"Hasso Plattner Institute","ror":"https://ror.org/058rn5r42","country_code":"DE","type":"facility","lineage":["https://openalex.org/I143288331","https://openalex.org/I176453806"]},{"id":"https://openalex.org/I176453806","display_name":"University of Potsdam","ror":"https://ror.org/03bnmw459","country_code":"DE","type":"education","lineage":["https://openalex.org/I176453806"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Richard Henkenjohann","raw_affiliation_strings":["Digital Health Center, Hasso Plattner Institute, University of Potsdam, Prof.-Dr.-Helmert-Str. 2-3, Potsdam, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Digital Health Center, Hasso Plattner Institute, University of Potsdam, Prof.-Dr.-Helmert-Str. 2-3, Potsdam, Germany","institution_ids":["https://openalex.org/I143288331","https://openalex.org/I176453806"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5053012847","display_name":"Matthieu-P. Schapranow","orcid":"https://orcid.org/0000-0001-6601-2942"},"institutions":[{"id":"https://openalex.org/I143288331","display_name":"Hasso Plattner Institute","ror":"https://ror.org/058rn5r42","country_code":"DE","type":"facility","lineage":["https://openalex.org/I143288331","https://openalex.org/I176453806"]},{"id":"https://openalex.org/I176453806","display_name":"University of Potsdam","ror":"https://ror.org/03bnmw459","country_code":"DE","type":"education","lineage":["https://openalex.org/I176453806"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Matthieu-P. Schapranow","raw_affiliation_strings":["Digital Health Center, Hasso Plattner Institute, University of Potsdam, Prof.-Dr.-Helmert-Str. 2-3, Potsdam, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Digital Health Center, Hasso Plattner Institute, University of Potsdam, Prof.-Dr.-Helmert-Str. 2-3, Potsdam, Germany","institution_ids":["https://openalex.org/I143288331","https://openalex.org/I176453806"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.29913097,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"2010","issue":null,"first_page":"2314","last_page":"2321"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.996999979019165,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10181","display_name":"Natural Language Processing Techniques","score":0.9952999949455261,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/german","display_name":"German","score":0.6904033422470093},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6369231939315796},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.586555004119873},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.46709388494491577},{"id":"https://openalex.org/keywords/linguistics","display_name":"Linguistics","score":0.22043439745903015},{"id":"https://openalex.org/keywords/philosophy","display_name":"Philosophy","score":0.08793562650680542}],"concepts":[{"id":"https://openalex.org/C154775046","wikidata":"https://www.wikidata.org/wiki/Q188","display_name":"German","level":2,"score":0.6904033422470093},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6369231939315796},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.586555004119873},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.46709388494491577},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.22043439745903015},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.08793562650680542}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/bibm52615.2021.9669851","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibm52615.2021.9669851","pdf_url":null,"source":{"id":"https://openalex.org/S4363607735","display_name":"2021 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"conference"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2021 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.800000011920929,"id":"https://metadata.un.org/sdg/4","display_name":"Quality Education"}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":37,"referenced_works":["https://openalex.org/W1550258693","https://openalex.org/W1614298861","https://openalex.org/W2052847729","https://openalex.org/W2099307202","https://openalex.org/W2125031621","https://openalex.org/W2159583324","https://openalex.org/W2250539671","https://openalex.org/W2251622960","https://openalex.org/W2493916176","https://openalex.org/W2514071032","https://openalex.org/W2538585973","https://openalex.org/W2575772377","https://openalex.org/W2577844987","https://openalex.org/W2741388816","https://openalex.org/W2758685863","https://openalex.org/W2785498108","https://openalex.org/W2797669327","https://openalex.org/W2880875857","https://openalex.org/W2964005834","https://openalex.org/W2970758702","https://openalex.org/W2989759966","https://openalex.org/W2997522493","https://openalex.org/W2997616700","https://openalex.org/W3101446481","https://openalex.org/W3137725182","https://openalex.org/W3156308192","https://openalex.org/W4294170691","https://openalex.org/W6608056421","https://openalex.org/W6632766574","https://openalex.org/W6636510571","https://openalex.org/W6678885109","https://openalex.org/W6682691769","https://openalex.org/W6726028665","https://openalex.org/W6731936614","https://openalex.org/W6732090206","https://openalex.org/W6751778410","https://openalex.org/W6752788575"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2748952813","https://openalex.org/W2315527029","https://openalex.org/W2065387230","https://openalex.org/W2323937687","https://openalex.org/W648995381","https://openalex.org/W3033791384","https://openalex.org/W2141885522","https://openalex.org/W2776312268","https://openalex.org/W3204019825"],"abstract_inverted_index":{"Clinical":[0],"concept":[1,80],"embeddings":[2,30,81,92,111,132],"enable":[3],"unsupervised":[4],"learning":[5],"of":[6,13,29,35,52,90],"relationships":[7],"among":[8],"medical":[9,23],"concepts.":[10],"A":[11],"range":[12],"benchmarks":[14],"quantifies":[15],"the":[16,50,53,59,88],"degree":[17],"to":[18,68,102,130],"which":[19,137],"learned":[20],"representations":[21],"capture":[22],"semantics.":[24],"However,":[25],"training":[26,78],"and":[27,86,118],"evaluation":[28],"require":[31],"a":[32,138],"large":[33,139],"amount":[34],"data.":[36,71],"In":[37],"addition,":[38],"embeddings\u2019":[39],"benchmark":[40,95,123],"score":[41],"varies":[42],"in":[43,106,133,136],"different":[44,100],"languages":[45,135],"because":[46],"it":[47],"differs":[48],"with":[49],"size":[51],"available":[54],"corpora.":[55,108],"Multi-modal":[56],"data":[57,63],"increases":[58],"corpus":[60],"size,":[61],"but":[62],"protection":[64],"regulations":[65],"limit":[66],"access":[67],"clinical":[69,79,104,115],"multi-modal":[70,140],"We":[72,109],"present":[73],"an":[74],"extendable":[75],"pipeline":[76],"for":[77],"on":[82,93,112,121],"various":[83,122],"text":[84,116],"corpora":[85,117],"evaluating":[87],"quality":[89],"trained":[91],"selected":[94,113],"tasks.":[96],"Our":[97,125],"work":[98,126],"provides":[99],"ways":[101],"identify":[103],"concepts":[105],"textual":[107],"train":[110,131],"German":[114],"evaluate":[119],"them":[120],"scores.":[124],"can":[127],"be":[128],"extended":[129],"other":[134],"dataset":[141],"is":[142],"not":[143],"available.":[144]},"counts_by_year":[],"updated_date":"2026-07-29T14:22:42.915294","created_date":"2025-10-10T00:00:00"}
