{"id":"https://openalex.org/W4205850138","doi":"https://doi.org/10.1109/bibm52615.2021.9669505","title":"GCNSDA: Predicting snoRNA-disease associations via graph convolutional network","display_name":"GCNSDA: Predicting snoRNA-disease associations via graph convolutional network","publication_year":2021,"publication_date":"2021-12-09","ids":{"openalex":"https://openalex.org/W4205850138","doi":"https://doi.org/10.1109/bibm52615.2021.9669505"},"language":"en","primary_location":{"id":"doi:10.1109/bibm52615.2021.9669505","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibm52615.2021.9669505","pdf_url":null,"source":{"id":"https://openalex.org/S4363607735","display_name":"2021 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"conference"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2021 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5007354837","display_name":"Dayun Liu","orcid":null},"institutions":[{"id":"https://openalex.org/I139660479","display_name":"Central South University","ror":"https://ror.org/00f1zfq44","country_code":"CN","type":"education","lineage":["https://openalex.org/I139660479"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Dayun Liu","raw_affiliation_strings":["School of Computer Science and Engineering, Central South University, Changsha, China"],"affiliations":[{"raw_affiliation_string":"School of Computer Science and Engineering, Central South University, Changsha, China","institution_ids":["https://openalex.org/I139660479"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5024359965","display_name":"Yi Luo","orcid":"https://orcid.org/0000-0002-5488-4724"},"institutions":[{"id":"https://openalex.org/I139660479","display_name":"Central South University","ror":"https://ror.org/00f1zfq44","country_code":"CN","type":"education","lineage":["https://openalex.org/I139660479"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yi Luo","raw_affiliation_strings":["School of Computer Science and Engineering, Central South University, Changsha, China"],"affiliations":[{"raw_affiliation_string":"School of Computer Science and Engineering, Central South University, Changsha, China","institution_ids":["https://openalex.org/I139660479"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051810238","display_name":"Jingjing Zheng","orcid":"https://orcid.org/0000-0002-8549-4235"},"institutions":[{"id":"https://openalex.org/I96908189","display_name":"Xinjiang University","ror":"https://ror.org/059gw8r13","country_code":"CN","type":"education","lineage":["https://openalex.org/I96908189"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jingjing Zheng","raw_affiliation_strings":["School of Software, Xinjiang University, Urumqi, China"],"affiliations":[{"raw_affiliation_string":"School of Software, Xinjiang University, Urumqi, China","institution_ids":["https://openalex.org/I96908189"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5033433779","display_name":"Hanlin Xu","orcid":"https://orcid.org/0000-0001-6828-620X"},"institutions":[{"id":"https://openalex.org/I139660479","display_name":"Central South University","ror":"https://ror.org/00f1zfq44","country_code":"CN","type":"education","lineage":["https://openalex.org/I139660479"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Hanlin Xu","raw_affiliation_strings":["School of Computer Science and Engineering, Central South University, Changsha, China"],"affiliations":[{"raw_affiliation_string":"School of Computer Science and Engineering, Central South University, Changsha, China","institution_ids":["https://openalex.org/I139660479"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100628892","display_name":"Jiaxuan Zhang","orcid":"https://orcid.org/0009-0005-1931-2244"},"institutions":[{"id":"https://openalex.org/I36258959","display_name":"University of California, San Diego","ror":"https://ror.org/0168r3w48","country_code":"US","type":"education","lineage":["https://openalex.org/I36258959"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jiaxuan Zhang","raw_affiliation_strings":["Department of Cognitive Science, University of California San Diego, La Jolla, United States"],"affiliations":[{"raw_affiliation_string":"Department of Cognitive Science, University of California San Diego, La Jolla, United States","institution_ids":["https://openalex.org/I36258959"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5085608332","display_name":"Lei Deng","orcid":"https://orcid.org/0000-0003-2869-1619"},"institutions":[{"id":"https://openalex.org/I139660479","display_name":"Central South University","ror":"https://ror.org/00f1zfq44","country_code":"CN","type":"education","lineage":["https://openalex.org/I139660479"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Lei Deng","raw_affiliation_strings":["School of Computer Science and Engineering, Central South University, Changsha, China"],"affiliations":[{"raw_affiliation_string":"School of Computer Science and Engineering, Central South University, Changsha, China","institution_ids":["https://openalex.org/I139660479"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5007354837"],"corresponding_institution_ids":["https://openalex.org/I139660479"],"apc_list":null,"apc_paid":null,"fwci":1.0376,"has_fulltext":false,"cited_by_count":6,"citation_normalized_percentile":{"value":0.73698885,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":null,"issue":null,"first_page":"183","last_page":"188"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11482","display_name":"RNA modifications and cancer","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11482","display_name":"RNA modifications and cancer","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10515","display_name":"Cancer-related molecular mechanisms research","score":0.9983000159263611,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13157","display_name":"Cancer-related gene regulation","score":0.9706000089645386,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/small-nucleolar-rna","display_name":"Small nucleolar RNA","score":0.933589518070221},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5527328252792358},{"id":"https://openalex.org/keywords/convolutional-neural-network","display_name":"Convolutional neural network","score":0.48192524909973145},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.44729360938072205},{"id":"https://openalex.org/keywords/disease","display_name":"Disease","score":0.44521600008010864},{"id":"https://openalex.org/keywords/graph","display_name":"Graph","score":0.43916428089141846},{"id":"https://openalex.org/keywords/long-non-coding-rna","display_name":"Long non-coding RNA","score":0.3768860399723053},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.32944291830062866},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.3260752558708191},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.2784188389778137},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.21576499938964844},{"id":"https://openalex.org/keywords/rna","display_name":"RNA","score":0.1795131266117096},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.17241355776786804},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.1415596604347229},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.09990358352661133}],"concepts":[{"id":"https://openalex.org/C179255354","wikidata":"https://www.wikidata.org/wiki/Q284416","display_name":"Small nucleolar RNA","level":5,"score":0.933589518070221},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5527328252792358},{"id":"https://openalex.org/C81363708","wikidata":"https://www.wikidata.org/wiki/Q17084460","display_name":"Convolutional neural network","level":2,"score":0.48192524909973145},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.44729360938072205},{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.44521600008010864},{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.43916428089141846},{"id":"https://openalex.org/C62203573","wikidata":"https://www.wikidata.org/wiki/Q15087973","display_name":"Long non-coding RNA","level":4,"score":0.3768860399723053},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.32944291830062866},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.3260752558708191},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.2784188389778137},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.21576499938964844},{"id":"https://openalex.org/C67705224","wikidata":"https://www.wikidata.org/wiki/Q11053","display_name":"RNA","level":3,"score":0.1795131266117096},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.17241355776786804},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.1415596604347229},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.09990358352661133},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/bibm52615.2021.9669505","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibm52615.2021.9669505","pdf_url":null,"source":{"id":"https://openalex.org/S4363607735","display_name":"2021 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"conference"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2021 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3","score":0.7599999904632568}],"awards":[],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320321514","display_name":"Central South University","ror":"https://ror.org/00f1zfq44"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":26,"referenced_works":["https://openalex.org/W2043841998","https://openalex.org/W2087555780","https://openalex.org/W2118100797","https://openalex.org/W2120920586","https://openalex.org/W2131496849","https://openalex.org/W2157825442","https://openalex.org/W2295739661","https://openalex.org/W2340502990","https://openalex.org/W2567465856","https://openalex.org/W2901312953","https://openalex.org/W2942820662","https://openalex.org/W2945827670","https://openalex.org/W2980767508","https://openalex.org/W3000082418","https://openalex.org/W3004578093","https://openalex.org/W3010127844","https://openalex.org/W3020929333","https://openalex.org/W3034046925","https://openalex.org/W3037489518","https://openalex.org/W3080286031","https://openalex.org/W3100278010","https://openalex.org/W3120280121","https://openalex.org/W3158143432","https://openalex.org/W4241442281","https://openalex.org/W6780139701","https://openalex.org/W6782531509"],"related_works":["https://openalex.org/W2263534175","https://openalex.org/W4239269398","https://openalex.org/W2802705617","https://openalex.org/W14849116","https://openalex.org/W25403435","https://openalex.org/W4400937039","https://openalex.org/W2763430914","https://openalex.org/W2547129954","https://openalex.org/W2136467378","https://openalex.org/W2056330045"],"abstract_inverted_index":{"Small":[0],"nucleolar":[1],"RNAs(snoRNAs)":[2],"represent":[3],"an":[4],"abundant":[5],"group":[6],"of":[7,13,28,50,116,143,167],"noncoding":[8],"RNAs":[9],"in":[10,24,169],"the":[11,39,96,113,132,156,165],"nucleolus":[12],"eukaryotes.":[14],"Recent":[15],"studies":[16],"revealed":[17],"that":[18,99,130,150],"snoRNAs":[19,117,135,144],"play":[20],"a":[21,25,66,78,101,122],"significant":[22],"role":[23],"wide":[26],"range":[27],"diseases.":[29,146],"Identifying":[30],"snoRNA-disease":[31,71,88,107,171],"associations":[32],"can":[33],"provide":[34],"great":[35],"insights":[36],"into":[37],"understanding":[38],"disease":[40],"and":[41,43,58,118,136,138,145],"treatment":[42],"boosting":[44],"drug":[45],"discovery":[46],"development.":[47],"Traditional":[48],"methods":[49],"using":[51],"biological":[52],"experiments":[53],"are":[54],"often":[55],"usually":[56],"small-scale":[57],"time-consuming.":[59],"Therefore,":[60],"it":[61,120],"is":[62,95,110],"urgent":[63],"to":[64,69,105,126],"develop":[65],"computational":[67],"framework":[68,84,98],"predict":[70,106],"associations.":[72,89,108,172],"In":[73],"this":[74],"work,":[75],"we":[76],"proposed":[77],"novel":[79],"Graph":[80],"Convolutional":[81],"Network(GCN)":[82],"based":[83],"GCNSDA":[85,94,109,151,168],"for":[86],"predicting":[87,170],"To":[90],"our":[91],"best":[92],"knowledge,":[93],"first":[97],"uses":[100,121],"graph":[102,115,123],"convolutional":[103],"network":[104,125],"built":[111],"on":[112],"bipartite":[114],"diseases;":[119],"neural":[124],"discover":[127],"latent":[128],"factors":[129],"cause":[131],"association":[133],"between":[134],"diseases":[137],"then":[139],"generate":[140],"embedded":[141],"representations":[142],"Experimental":[147],"results":[148],"showed":[149],"achieved":[152],"better":[153],"performance":[154],"than":[155],"other":[157],"six":[158],"state-of-the-art":[159],"methods.":[160],"Case":[161],"study":[162],"further":[163],"confirmed":[164],"effectiveness":[166]},"counts_by_year":[{"year":2025,"cited_by_count":4},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
