{"id":"https://openalex.org/W4205795611","doi":"https://doi.org/10.1109/bibm52615.2021.9669447","title":"Construction of Depression Knowledge Graph Based on Biomedical Literature","display_name":"Construction of Depression Knowledge Graph Based on Biomedical Literature","publication_year":2021,"publication_date":"2021-12-09","ids":{"openalex":"https://openalex.org/W4205795611","doi":"https://doi.org/10.1109/bibm52615.2021.9669447"},"language":"en","primary_location":{"id":"doi:10.1109/bibm52615.2021.9669447","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibm52615.2021.9669447","pdf_url":null,"source":{"id":"https://openalex.org/S4363607735","display_name":"2021 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"conference"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2021 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100711426","display_name":"Zepeng Li","orcid":null},"institutions":[{"id":"https://openalex.org/I76214153","display_name":"Lanzhou University","ror":"https://ror.org/01mkqqe32","country_code":"CN","type":"education","lineage":["https://openalex.org/I76214153"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Zepeng Li","raw_affiliation_strings":["School of Information Science and Engineering, Lanzhou University, Lanzhou, China"],"affiliations":[{"raw_affiliation_string":"School of Information Science and Engineering, Lanzhou University, Lanzhou, China","institution_ids":["https://openalex.org/I76214153"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100459675","display_name":"Yufeng Zhang","orcid":"https://orcid.org/0000-0001-8236-1878"},"institutions":[{"id":"https://openalex.org/I76214153","display_name":"Lanzhou University","ror":"https://ror.org/01mkqqe32","country_code":"CN","type":"education","lineage":["https://openalex.org/I76214153"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yufeng Zhang","raw_affiliation_strings":["School of Information Science and Engineering, Lanzhou University, Lanzhou, China"],"affiliations":[{"raw_affiliation_string":"School of Information Science and Engineering, Lanzhou University, Lanzhou, China","institution_ids":["https://openalex.org/I76214153"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5075146350","display_name":"Rikui Huang","orcid":null},"institutions":[{"id":"https://openalex.org/I76214153","display_name":"Lanzhou University","ror":"https://ror.org/01mkqqe32","country_code":"CN","type":"education","lineage":["https://openalex.org/I76214153"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Rikui Huang","raw_affiliation_strings":["School of Information Science and Engineering, Lanzhou University, Lanzhou, China"],"affiliations":[{"raw_affiliation_string":"School of Information Science and Engineering, Lanzhou University, Lanzhou, China","institution_ids":["https://openalex.org/I76214153"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100673848","display_name":"Zhenwen Zhang","orcid":"https://orcid.org/0000-0001-8443-8779"},"institutions":[{"id":"https://openalex.org/I76214153","display_name":"Lanzhou University","ror":"https://ror.org/01mkqqe32","country_code":"CN","type":"education","lineage":["https://openalex.org/I76214153"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhenwen Zhang","raw_affiliation_strings":["School of Information Science and Engineering, Lanzhou University, Lanzhou, China"],"affiliations":[{"raw_affiliation_string":"School of Information Science and Engineering, Lanzhou University, Lanzhou, China","institution_ids":["https://openalex.org/I76214153"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5113050797","display_name":"Jianghong Zhu","orcid":null},"institutions":[{"id":"https://openalex.org/I76214153","display_name":"Lanzhou University","ror":"https://ror.org/01mkqqe32","country_code":"CN","type":"education","lineage":["https://openalex.org/I76214153"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jianghong Zhu","raw_affiliation_strings":["School of Information Science and Engineering, Lanzhou University, Lanzhou, China"],"affiliations":[{"raw_affiliation_string":"School of Information Science and Engineering, Lanzhou University, Lanzhou, China","institution_ids":["https://openalex.org/I76214153"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5084944098","display_name":"Zhihua Guo","orcid":"https://orcid.org/0000-0001-8966-7415"},"institutions":[{"id":"https://openalex.org/I76214153","display_name":"Lanzhou University","ror":"https://ror.org/01mkqqe32","country_code":"CN","type":"education","lineage":["https://openalex.org/I76214153"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhihua Guo","raw_affiliation_strings":["School of Information Science and Engineering, Lanzhou University, Lanzhou, China"],"affiliations":[{"raw_affiliation_string":"School of Information Science and Engineering, Lanzhou University, Lanzhou, China","institution_ids":["https://openalex.org/I76214153"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100380066","display_name":"Bin Hu","orcid":"https://orcid.org/0000-0003-3514-5413"},"institutions":[{"id":"https://openalex.org/I4210106477","display_name":"Shanghai Institutes for Biological Sciences","ror":"https://ror.org/011rf9d86","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210106477"]},{"id":"https://openalex.org/I125839683","display_name":"Beijing Institute of Technology","ror":"https://ror.org/01skt4w74","country_code":"CN","type":"education","lineage":["https://openalex.org/I125839683","https://openalex.org/I890469752"]},{"id":"https://openalex.org/I76214153","display_name":"Lanzhou University","ror":"https://ror.org/01mkqqe32","country_code":"CN","type":"education","lineage":["https://openalex.org/I76214153"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Bin Hu","raw_affiliation_strings":["CAS Center for Excellence in Brain Science and Institutes for Biological Sciences, Shanghai Institutes for Biological Sciences, Chines Academy of Sciences, Shanghai, China","Institute of Engineering Medicine, Beijing Institute of Technology, Beijing, China","School of Information Science and Engineering, Lanzhou University, Lanzhou, China"],"affiliations":[{"raw_affiliation_string":"CAS Center for Excellence in Brain Science and Institutes for Biological Sciences, Shanghai Institutes for Biological Sciences, Chines Academy of Sciences, Shanghai, China","institution_ids":["https://openalex.org/I4210106477"]},{"raw_affiliation_string":"Institute of Engineering Medicine, Beijing Institute of Technology, Beijing, China","institution_ids":["https://openalex.org/I125839683"]},{"raw_affiliation_string":"School of Information Science and Engineering, Lanzhou University, Lanzhou, China","institution_ids":["https://openalex.org/I76214153"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5100711426"],"corresponding_institution_ids":["https://openalex.org/I76214153"],"apc_list":null,"apc_paid":null,"fwci":1.0376,"has_fulltext":false,"cited_by_count":4,"citation_normalized_percentile":{"value":0.73420074,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":null,"issue":null,"first_page":"1849","last_page":"1855"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9983999729156494,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9983999729156494,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9890000224113464,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.9214000105857849,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/knowledge-graph","display_name":"Knowledge graph","score":0.6372488737106323},{"id":"https://openalex.org/keywords/graph","display_name":"Graph","score":0.635905385017395},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6265754699707031},{"id":"https://openalex.org/keywords/mood","display_name":"Mood","score":0.6230801343917847},{"id":"https://openalex.org/keywords/knowledge-extraction","display_name":"Knowledge extraction","score":0.6017521619796753},{"id":"https://openalex.org/keywords/data-extraction","display_name":"Data extraction","score":0.5824891924858093},{"id":"https://openalex.org/keywords/depression","display_name":"Depression (economics)","score":0.5665846467018127},{"id":"https://openalex.org/keywords/construct","display_name":"Construct (python library)","score":0.5268498659133911},{"id":"https://openalex.org/keywords/medical-knowledge","display_name":"Medical knowledge","score":0.5083650946617126},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.4678018391132355},{"id":"https://openalex.org/keywords/mood-disorders","display_name":"Mood disorders","score":0.4574302136898041},{"id":"https://openalex.org/keywords/graph-theory","display_name":"Graph theory","score":0.4571222960948944},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.40355950593948364},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.35891857743263245},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.3191605806350708},{"id":"https://openalex.org/keywords/medline","display_name":"MEDLINE","score":0.2863638997077942},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.23771968483924866},{"id":"https://openalex.org/keywords/psychiatry","display_name":"Psychiatry","score":0.21779224276542664},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.13044306635856628},{"id":"https://openalex.org/keywords/medical-education","display_name":"Medical education","score":0.0952308177947998}],"concepts":[{"id":"https://openalex.org/C2987255567","wikidata":"https://www.wikidata.org/wiki/Q33002955","display_name":"Knowledge graph","level":2,"score":0.6372488737106323},{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.635905385017395},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6265754699707031},{"id":"https://openalex.org/C2780733359","wikidata":"https://www.wikidata.org/wiki/Q331769","display_name":"Mood","level":2,"score":0.6230801343917847},{"id":"https://openalex.org/C120567893","wikidata":"https://www.wikidata.org/wiki/Q1582085","display_name":"Knowledge extraction","level":2,"score":0.6017521619796753},{"id":"https://openalex.org/C2777466982","wikidata":"https://www.wikidata.org/wiki/Q5227287","display_name":"Data extraction","level":3,"score":0.5824891924858093},{"id":"https://openalex.org/C2776867660","wikidata":"https://www.wikidata.org/wiki/Q1814941","display_name":"Depression (economics)","level":2,"score":0.5665846467018127},{"id":"https://openalex.org/C2780801425","wikidata":"https://www.wikidata.org/wiki/Q5164392","display_name":"Construct (python library)","level":2,"score":0.5268498659133911},{"id":"https://openalex.org/C2985722590","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medical knowledge","level":2,"score":0.5083650946617126},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.4678018391132355},{"id":"https://openalex.org/C2777134132","wikidata":"https://www.wikidata.org/wiki/Q188638","display_name":"Mood disorders","level":3,"score":0.4574302136898041},{"id":"https://openalex.org/C88230418","wikidata":"https://www.wikidata.org/wiki/Q131476","display_name":"Graph theory","level":2,"score":0.4571222960948944},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.40355950593948364},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.35891857743263245},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.3191605806350708},{"id":"https://openalex.org/C2779473830","wikidata":"https://www.wikidata.org/wiki/Q1540899","display_name":"MEDLINE","level":2,"score":0.2863638997077942},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.23771968483924866},{"id":"https://openalex.org/C118552586","wikidata":"https://www.wikidata.org/wiki/Q7867","display_name":"Psychiatry","level":1,"score":0.21779224276542664},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.13044306635856628},{"id":"https://openalex.org/C509550671","wikidata":"https://www.wikidata.org/wiki/Q126945","display_name":"Medical education","level":1,"score":0.0952308177947998},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.0},{"id":"https://openalex.org/C558461103","wikidata":"https://www.wikidata.org/wiki/Q154430","display_name":"Anxiety","level":2,"score":0.0},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0},{"id":"https://openalex.org/C139719470","wikidata":"https://www.wikidata.org/wiki/Q39680","display_name":"Macroeconomics","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/bibm52615.2021.9669447","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibm52615.2021.9669447","pdf_url":null,"source":{"id":"https://openalex.org/S4363607735","display_name":"2021 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"conference"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2021 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.800000011920929,"id":"https://metadata.un.org/sdg/3","display_name":"Good health and well-being"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320313889","display_name":"Lanzhou University","ror":"https://ror.org/01mkqqe32"},{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320335787","display_name":"Fundamental Research Funds for the Central Universities","ror":null},{"id":"https://openalex.org/F4320337504","display_name":"Research and Development","ror":"https://ror.org/027s68j25"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":31,"referenced_works":["https://openalex.org/W12711134","https://openalex.org/W102708294","https://openalex.org/W378747138","https://openalex.org/W1538085078","https://openalex.org/W2052569240","https://openalex.org/W2086320398","https://openalex.org/W2094728533","https://openalex.org/W2098201295","https://openalex.org/W2100962793","https://openalex.org/W2114544510","https://openalex.org/W2117446654","https://openalex.org/W2143448637","https://openalex.org/W2159583324","https://openalex.org/W2398781203","https://openalex.org/W2620787630","https://openalex.org/W2728003555","https://openalex.org/W2735585131","https://openalex.org/W2763982433","https://openalex.org/W2916226351","https://openalex.org/W2971629451","https://openalex.org/W3003417734","https://openalex.org/W3025630664","https://openalex.org/W3041736495","https://openalex.org/W3162532547","https://openalex.org/W6600519283","https://openalex.org/W6612948155","https://openalex.org/W6712678445","https://openalex.org/W6738832195","https://openalex.org/W6741056403","https://openalex.org/W6767662938","https://openalex.org/W6778060071"],"related_works":["https://openalex.org/W4292070284","https://openalex.org/W4319071221","https://openalex.org/W4313174091","https://openalex.org/W4313219769","https://openalex.org/W4385571037","https://openalex.org/W4385324817","https://openalex.org/W4286008391","https://openalex.org/W1488626450","https://openalex.org/W4294892365","https://openalex.org/W2991493070"],"abstract_inverted_index":{"Depression":[0],"is":[1,36,56,105],"a":[2,25,72,106],"common":[3],"mood":[4],"disorder,":[5],"which":[6,40,104,144],"has":[7],"the":[8,34,44,60,63,83,92,122,130,155,161],"characteristics":[9],"of":[10,28,46,67,75,85],"high":[11,13,16,20],"prevalence,":[12],"recurrence":[14],"rate,":[15],"disability":[17],"rate":[18],"and":[19,38,49,55,65,96,148],"mortality":[21],"rate.":[22],"There":[23],"are":[24],"large":[26,37],"number":[27,35],"medical":[29,50,89],"literature":[30,80],"on":[31,62,78],"depression,":[32],"but":[33],"disorderly,":[39],"will":[41],"undoubtedly":[42],"increase":[43],"burden":[45],"biomedical":[47,79,107],"researchers":[48],"workers":[51],"to":[52,59,81,120,159],"obtain":[53],"knowledge,":[54],"not":[57],"conducive":[58],"research":[61],"pathogenesis":[64],"treatment":[66],"depression.":[68,86],"Therefore,":[69],"we":[70,112,139],"construct":[71],"knowledge":[73,98,132,162],"graph":[74,156],"depression":[76],"based":[77],"assist":[82],"study":[84],"We":[87,151],"use":[88,113],"abstracts":[90],"as":[91],"main":[93],"data":[94,123,135],"source":[95],"extract":[97],"from":[99,137],"them":[100,153],"by":[101,125,128],"using":[102],"SemRep,":[103],"information":[108,115],"extraction":[109,116],"system.":[110],"Secondly,":[111],"another":[114],"tool":[117],"named":[118],"OpenIE":[119],"correct":[121],"extracted":[124,131,136],"SemRep.":[126],"Then,":[127],"fusing":[129],"with":[133],"structured":[134],"SemMedDB,":[138],"finally":[140],"get":[141],"8,840":[142],"triples":[143],"include":[145],"3,055":[146],"entities":[147],"30":[149],"relationships.":[150],"store":[152],"into":[154],"database":[157],"Neo4j":[158],"visualize":[160],"graph.":[163]},"counts_by_year":[{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
