{"id":"https://openalex.org/W3126425530","doi":"https://doi.org/10.1109/bibm49941.2020.9313571","title":"Towards Bootstrapping Biomedical Named Entity Recognition using Reinforcement Learning","display_name":"Towards Bootstrapping Biomedical Named Entity Recognition using Reinforcement Learning","publication_year":2020,"publication_date":"2020-12-16","ids":{"openalex":"https://openalex.org/W3126425530","doi":"https://doi.org/10.1109/bibm49941.2020.9313571","mag":"3126425530"},"language":"en","primary_location":{"id":"doi:10.1109/bibm49941.2020.9313571","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibm49941.2020.9313571","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2020 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100450579","display_name":"Dongsheng Wang","orcid":"https://orcid.org/0000-0001-7341-2776"},"institutions":[{"id":"https://openalex.org/I20231570","display_name":"Peking University","ror":"https://ror.org/02v51f717","country_code":"CN","type":"education","lineage":["https://openalex.org/I20231570"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Dongsheng Wang","raw_affiliation_strings":["School of Software & Microelectronics, Peking University, Beijing, China"],"affiliations":[{"raw_affiliation_string":"School of Software & Microelectronics, Peking University, Beijing, China","institution_ids":["https://openalex.org/I20231570"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5040666670","display_name":"Hongjie Fan","orcid":"https://orcid.org/0000-0002-4872-8557"},"institutions":[{"id":"https://openalex.org/I177955009","display_name":"China University of Political Science and Law","ror":"https://ror.org/00e49gy82","country_code":"CN","type":"education","lineage":["https://openalex.org/I177955009"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Hongjie Fan","raw_affiliation_strings":["China University of Political Science and Law, Beijing, China"],"affiliations":[{"raw_affiliation_string":"China University of Political Science and Law, Beijing, China","institution_ids":["https://openalex.org/I177955009"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5023014733","display_name":"Junfei Liu","orcid":null},"institutions":[{"id":"https://openalex.org/I20231570","display_name":"Peking University","ror":"https://ror.org/02v51f717","country_code":"CN","type":"education","lineage":["https://openalex.org/I20231570"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Junfei Liu","raw_affiliation_strings":["School of Electronics Engineering and Computer Science, Peking University, Beijing, China"],"affiliations":[{"raw_affiliation_string":"School of Electronics Engineering and Computer Science, Peking University, Beijing, China","institution_ids":["https://openalex.org/I20231570"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5100450579"],"corresponding_institution_ids":["https://openalex.org/I20231570"],"apc_list":null,"apc_paid":null,"fwci":0.3977,"has_fulltext":false,"cited_by_count":3,"citation_normalized_percentile":{"value":0.70404518,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":null,"issue":null,"first_page":"778","last_page":"784"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10181","display_name":"Natural Language Processing Techniques","score":0.9939000010490417,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9872000217437744,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/bootstrapping","display_name":"Bootstrapping (finance)","score":0.8139926195144653},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7537879943847656},{"id":"https://openalex.org/keywords/reinforcement-learning","display_name":"Reinforcement learning","score":0.7472285032272339},{"id":"https://openalex.org/keywords/named-entity-recognition","display_name":"Named-entity recognition","score":0.5363416075706482},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.511933445930481},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.4256507158279419},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.37099510431289673},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.12766122817993164},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.06575796008110046}],"concepts":[{"id":"https://openalex.org/C207609745","wikidata":"https://www.wikidata.org/wiki/Q4944086","display_name":"Bootstrapping (finance)","level":2,"score":0.8139926195144653},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7537879943847656},{"id":"https://openalex.org/C97541855","wikidata":"https://www.wikidata.org/wiki/Q830687","display_name":"Reinforcement learning","level":2,"score":0.7472285032272339},{"id":"https://openalex.org/C2779135771","wikidata":"https://www.wikidata.org/wiki/Q403574","display_name":"Named-entity recognition","level":3,"score":0.5363416075706482},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.511933445930481},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.4256507158279419},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.37099510431289673},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.12766122817993164},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.06575796008110046},{"id":"https://openalex.org/C149782125","wikidata":"https://www.wikidata.org/wiki/Q160039","display_name":"Econometrics","level":1,"score":0.0},{"id":"https://openalex.org/C201995342","wikidata":"https://www.wikidata.org/wiki/Q682496","display_name":"Systems engineering","level":1,"score":0.0},{"id":"https://openalex.org/C2780451532","wikidata":"https://www.wikidata.org/wiki/Q759676","display_name":"Task (project management)","level":2,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/bibm49941.2020.9313571","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibm49941.2020.9313571","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2020 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":26,"referenced_works":["https://openalex.org/W1982626598","https://openalex.org/W2067326963","https://openalex.org/W2101210369","https://openalex.org/W2106797966","https://openalex.org/W2125117006","https://openalex.org/W2155027007","https://openalex.org/W2163918411","https://openalex.org/W2398489001","https://openalex.org/W2522781938","https://openalex.org/W2527896214","https://openalex.org/W2609602893","https://openalex.org/W2618530766","https://openalex.org/W2799125718","https://openalex.org/W2808284704","https://openalex.org/W2890060418","https://openalex.org/W2890461267","https://openalex.org/W2891383691","https://openalex.org/W2898498213","https://openalex.org/W2947569483","https://openalex.org/W2963150697","https://openalex.org/W2963339489","https://openalex.org/W2964331270","https://openalex.org/W2971039193","https://openalex.org/W2971071849","https://openalex.org/W2977942577","https://openalex.org/W3005056635"],"related_works":["https://openalex.org/W2947569483","https://openalex.org/W2078793151","https://openalex.org/W3017222382","https://openalex.org/W3128216712","https://openalex.org/W3136915866","https://openalex.org/W4390279576","https://openalex.org/W2886890203","https://openalex.org/W4313535650","https://openalex.org/W2287770975","https://openalex.org/W2991463832"],"abstract_inverted_index":{"Named":[0],"entity":[1,149],"recognition":[2,66,150],"is":[3,32,40,54,73],"one":[4,52],"of":[5,22,70,98],"the":[6,33],"most":[7],"fundamental":[8],"problems":[9],"in":[10,155],"knowledge":[11,24],"graph.":[12],"In":[13],"biomedical":[14,18,90,101,108,136,147,160],"field,":[15],"labeling":[16],"high-quality":[17],"entities":[19,102],"requires":[20],"plenty":[21],"linguistic":[23],"due":[25,60],"to":[26,42,61,86,105],"abbreviation":[27],"and":[28,47,75,110,124,151,158],"specificity.":[29],"Using":[30],"dictionary":[31,46,50],"simplest":[34],"way":[35],"for":[36,51,57],"labeling,":[37],"but":[38],"it":[39],"difficult":[41],"obtain":[43,152],"a":[44,49,83,95,118],"versatile":[45],"usually":[48],"corpus":[53,59],"not":[55],"suitable":[56],"another":[58],"bad":[62],"transferability.":[63],"Current":[64],"mainstream":[65],"methods":[67],"require":[68],"lots":[69],"manpower,":[71],"which":[72],"time-consuming":[74],"laborious.":[76],"To":[77],"handle":[78],"this":[79],"challenge,":[80],"we":[81,93,132],"present":[82],"novel":[84],"approach":[85],"automatically":[87],"recognize":[88],"new":[89,135],"entities.":[91,137],"First,":[92],"use":[94],"small":[96],"number":[97],"manually":[99],"labeled":[100],"as":[103],"seeds":[104],"label":[106],"some":[107],"texts":[109],"learn":[111],"their":[112],"features":[113],"autonomously.":[114],"Then":[115],"by":[116],"using":[117],"tagger":[119],"based":[120,128],"on":[121,129],"supervised":[122],"learning":[123],"an":[125],"instance":[126],"selector":[127],"reinforcement":[130],"learning,":[131],"iteratively":[133],"generate":[134],"Experiment":[138],"results":[139],"demonstrate":[140],"that":[141],"our":[142],"method":[143],"can":[144],"deal":[145],"with":[146],"named":[148],"significant":[153],"performances":[154],"both":[156],"English":[157],"Chinese":[159],"datasets.":[161]},"counts_by_year":[{"year":2023,"cited_by_count":2},{"year":2021,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
